Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0079g00420.t01
CDS Infomation

cds chromosome:12X:4:10905192:10909865:1 gene:VIT_04s0079g00420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6HFW4]
Sequence

ATGACAGCTGCTATGATACGAGCTCCAACATTCCTCCTCCTCCTCCTCCAGCTGTTATTC
ACGACAGTGGCCGCCCACTTCTCTTCCTCATCATCATCATCCTCCTCCTCCTCTTCATCG
GCCACACTCTCAGAGTGGAGATCTGGGCGAGCAACTTACTACGCGGCGGCGGACCCAAGA
GACGCGGTGGGGGGCGCGTGCGGGTACGGAGACTTGGTCAAGAGTGGATATGGAATGGCG
ACGGTGGGACTGAGCGAGGCGCTGTTCGAGAGGGGCCAGATCTGCGGGGGATGCTTCGAG
CTGAGGTGCGTGGACGACCTCCGCTGGTGCATTCCGGGGACGTCCATCATCGTCACGGCC
ACCAACTTCTGCGCCCCTAACTATGGGTTCCCGGCGGACGGCGGGGGGCACTGCAACCCT
CCCAACAACCACTTTGTTCTCCCCATTGAGGCCTTTGAGAAGATCGCTATTTGGAAGGCT
GCCAACATGCCTGTCCACTATCGGAGGATCAAATGCAGAAAAGAAGGCGGTGTTCGATTT
TCACTTGATGGATCAGGTATATTCTTATCAGTGCTGATCAGCAATGTGGGTGGCGCTGGA
GACATAGTGGGAGTGAAGGTAAAGGGTTCAAGAACAGGATGGCTTCCAATGGGCAGGAAT
TGGGGTCAGAACTGGCATCTCAATGCTGATTTAAAGAATCAGCCTCTTTCCTTTGAGATC
ACTGCTAGCGATGGAATCACCCTCACATCTTACAATGTTGCTCCCAAGGGTTGGAATTTT
GGACAGACTTTTGAAGGCAAGCAATTTGAATCTTAA

Peptide Sequence

PEP ID

VIT_04s0079g00420.t01
PEP Infomation

pep chromosome:12X:4:10905192:10909865:1 gene:VIT_04s0079g00420 transcript:VIT_04s0079g00420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6HFW4]
Sequence

MTAAMIRAPTFLLLLLQLLFTTVAAHFSSSSSSSSSSSSSATLSEWRSGRATYYAAADPR
DAVGGACGYGDLVKSGYGMATVGLSEALFERGQICGGCFELRCVDDLRWCIPGTSIIVTA
TNFCAPNYGFPADGGGHCNPPNNHFVLPIEAFEKIAIWKAANMPVHYRRIKCRKEGGVRF
SLDGSGIFLSVLISNVGGAGDIVGVKVKGSRTGWLPMGRNWGQNWHLNADLKNQPLSFEI
TASDGITLTSYNVAPKGWNFGQTFEGKQFES

Transcript Sequence

Transcript ID

VIT_04s0079g00420.t01
Transcript Infomation

cdna chromosome:12X:4:10905192:10909865:1 gene:VIT_04s0079g00420 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6HFW4]
Sequence

ACAAAAAAAACATAATGTGGAGAGATTCGGGGAAAAATCAGTGGAAACAGTCTACAACAC
TCTCAAGTAAAACCAAAGCTGCCATCGCTCTCTCTCTCTCTCTCAAACCAGACAGCAAAA
AGAAAAATAATAAAAGAAAAATGACAGCTGCTATGATACGAGCTCCAACATTCCTCCTCC
TCCTCCTCCAGCTGTTATTCACGACAGTGGCCGCCCACTTCTCTTCCTCATCATCATCAT
CCTCCTCCTCCTCTTCATCGGCCACACTCTCAGAGTGGAGATCTGGGCGAGCAACTTACT
ACGCGGCGGCGGACCCAAGAGACGCGGTGGGGGGCGCGTGCGGGTACGGAGACTTGGTCA
AGAGTGGATATGGAATGGCGACGGTGGGACTGAGCGAGGCGCTGTTCGAGAGGGGCCAGA
TCTGCGGGGGATGCTTCGAGCTGAGGTGCGTGGACGACCTCCGCTGGTGCATTCCGGGGA
CGTCCATCATCGTCACGGCCACCAACTTCTGCGCCCCTAACTATGGGTTCCCGGCGGACG
GCGGGGGGCACTGCAACCCTCCCAACAACCACTTTGTTCTCCCCATTGAGGCCTTTGAGA
AGATCGCTATTTGGAAGGCTGCCAACATGCCTGTCCACTATCGGAGGATCAAATGCAGAA
AAGAAGGCGGTGTTCGATTTTCACTTGATGGATCAGGTATATTCTTATCAGTGCTGATCA
GCAATGTGGGTGGCGCTGGAGACATAGTGGGAGTGAAGGTAAAGGGTTCAAGAACAGGAT
GGCTTCCAATGGGCAGGAATTGGGGTCAGAACTGGCATCTCAATGCTGATTTAAAGAATC
AGCCTCTTTCCTTTGAGATCACTGCTAGCGATGGAATCACCCTCACATCTTACAATGTTG
CTCCCAAGGGTTGGAATTTTGGACAGACTTTTGAAGGCAAGCAATTTGAATCTTAAATTA
CATATCCAAGATGAAAAATCATATACATCAAACTTTTCTTTTGCTTTTCCCACTGGGTTG
GAGGGGTGTATGGAATGGGTGGCTTTTTATTTGAAGGGAAAAGGTACATGTTATTAATGG
AATGATTTGAGACTTTATATGAAAGCCTACTTGATGGTTTCATAATTAAA