Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0079g00410.t01
CDS Infomation

cds chromosome:12X:4:10884890:10889043:1 gene:VIT_04s0079g00410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTGTTGAGGATCAAAGTGGAGGTAGTCGTTCAAATACCTTTCTATCAGCTGGTAAT
CTAATTTCATTGGATGCTGGGACTCATTCTTTAACTGCTGCTGAGCTGAAGGAGCAATTT
TCTTGCAGAGATGACCTGGCTCCCAAGGCTAGGAAACCATACACAATTACCAAACAAAGA
GAAAGATGGACTGAAGAAGAGCATAAGAAGTTTCTTGAAGCTTTAAAGCTGTATGGTCGG
GCTTGGAGGCGTATAGAAGAGCATGTGGGCACCAAGACTGCAGTTCAGATTCGAAGCCAT
GCCCAGAAGTTTTTCTCTAAGGTGGTTCGGGAAACAAGTGGTGGCAACACAAACTCAGCA
GAACCTATTGAGATTCCTCCTCCCAGACCAAAACGAAAACCTGTTCACCCTTATCCCCGT
AAACTGGTGCACCCACTTAGAAAAGGAATCTCAGTTCTTGAGCCGCCAGTGAGATCTGTA
TCACCAAATTTTTCGGCTTCAGAACAAGAAAACCAGTCCCCCACATCAGTATTATCAGCA
GTTGGTTCAGAGACACTGGGTTCCACACTTTCAAATACACAGAATGGTAGCCCATCTCCA
GTTTCATCTGCGGCTGGTGTCAACCCAGATAGAATGTTTCTCCCTGAACTCAATCCACCA
ACCGAGGAAAATGCATCTCCATCCCCGGTCTTAACGACATCTAGCTCTGTTCCGGATGAA
CCTTTACCCATGAAGTTCGAGTTGTTTCCACAGGAAATATTTGCTAAAGAATGTTCGGTC
GAGGAAGCATCCACCCGAACTCTTAAGCTATTTGGGAGGACTGTATTAGTGACAGATTCC
CACAGGCCATCTTCTCCAACAACCTCTAAGTCTCAGCCTTCAGACATTAATAACGAGGGA
ATGCATGTTGAAACATTACCATGGAACTCAACACCCACAGAATCTTCTCCCGAGAATTCA
AGTTTTTCATGGAGTCATTTGCAACCTCAACCATCAGGGGCTTTCTATTACATGCATTTC
CAGAAAGAGGATTCAAATTGTGTAGAAGCTGGTACCACTGCTCCCCTGCCATGGTGGACC
TTTTATGGGGGCATACCAATTCCTTTCCTTCCGCTCCATCATCAGGACTCGATCAAAGCA
CATGAAGACACAAAATTTGCTGAAACTCATGACAAAGAGATTCAGAAGGAAGGATCTTGG
ACAGGGTCAAATACTGGATCAAGCCACCAACCTTATTTAGACACGATGGAAAAAGAATCA
GACTCAGCTTTCGAGTTAAAGTTGAGCGAGAGATCAGCCTTCTCTAGAGGAAGAACAAAC
ACGGACAAGTGTGTGAAGGGGTTTATGCCATATAAAAGATGTTTGGCAGAGAGAGACACC
CAGTCATCAATAATAATTGGGAACGAGAGGGAGGAGCAGAGGATCCGCCTTTGCTTGTAG

Peptide Sequence

PEP ID

VIT_04s0079g00410.t01
PEP Infomation

pep chromosome:12X:4:10884890:10889043:1 gene:VIT_04s0079g00410 transcript:VIT_04s0079g00410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTVEDQSGGSRSNTFLSAGNLISLDAGTHSLTAAELKEQFSCRDDLAPKARKPYTITKQR
ERWTEEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVVRETSGGNTNSA
EPIEIPPPRPKRKPVHPYPRKLVHPLRKGISVLEPPVRSVSPNFSASEQENQSPTSVLSA
VGSETLGSTLSNTQNGSPSPVSSAAGVNPDRMFLPELNPPTEENASPSPVLTTSSSVPDE
PLPMKFELFPQEIFAKECSVEEASTRTLKLFGRTVLVTDSHRPSSPTTSKSQPSDINNEG
MHVETLPWNSTPTESSPENSSFSWSHLQPQPSGAFYYMHFQKEDSNCVEAGTTAPLPWWT
FYGGIPIPFLPLHHQDSIKAHEDTKFAETHDKEIQKEGSWTGSNTGSSHQPYLDTMEKES
DSAFELKLSERSAFSRGRTNTDKCVKGFMPYKRCLAERDTQSSIIIGNEREEQRIRLCL

Transcript Sequence

Transcript ID

VIT_04s0079g00410.t01
Transcript Infomation

cdna chromosome:12X:4:10884890:10889043:1 gene:VIT_04s0079g00410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGATATTCAATAGTGTCCCTCCTTGTGTTTCTCTTCTCCTCCTTCTGCGTCGCAAACTTT
CTCCTCTCCAATTCGCTTCTATTCTCTTCCCTTCTCTTCTCTTCTCTCCTGTTCTCACTC
CTTTCTCTCTCCAACTACATCTGCTCTTTCTACAAGAGCTTCTACCCAAGCACAAATTGA
CATCTGGCTTTGTGGCGGGCCTTGCGGTTCTTTTCGGCCACCGGAAAGTCATATTTTCCC
TCTTCCTACTCTTTCACAATCAATCCATATACATCTCAAATTTCCCCTTGGAAGATTAAA
AAAAAACCGATTTCGTGGAATCTATGTTGGTTGGAAGATAACAGGAAGCGTCGATCTTGA
AGAACAAGCTGTTGTCGCTGAATCGGAAGTCGTCCTATGCATCATCTGGCCTGAAGTCGT
CTTGATTGTTTAGTTTTAAGACTTTTTCTGGGCATTTGAGCTGGAAGTCAGCTGGAAGCG
AAGAAAAAATACAAGTTCCCTTCTTAGATGACTTGTACGGATCAGAATGAGTCCATTCCC
GTACAAATTAATTGATTTTTTTTGTATTTTGATTATGCTGAAGATATAGAAAAAGGACTG
CTAGTTCGAAGAAGGCCAAGGGAAAAAAAAAAAGGAGATCTGCAGCCATGACTGTTGAGG
ATCAAAGTGGAGGTAGTCGTTCAAATACCTTTCTATCAGCTGGTAATCTAATTTCATTGG
ATGCTGGGACTCATTCTTTAACTGCTGCTGAGCTGAAGGAGCAATTTTCTTGCAGAGATG
ACCTGGCTCCCAAGGCTAGGAAACCATACACAATTACCAAACAAAGAGAAAGATGGACTG
AAGAAGAGCATAAGAAGTTTCTTGAAGCTTTAAAGCTGTATGGTCGGGCTTGGAGGCGTA
TAGAAGAGCATGTGGGCACCAAGACTGCAGTTCAGATTCGAAGCCATGCCCAGAAGTTTT
TCTCTAAGGTGGTTCGGGAAACAAGTGGTGGCAACACAAACTCAGCAGAACCTATTGAGA
TTCCTCCTCCCAGACCAAAACGAAAACCTGTTCACCCTTATCCCCGTAAACTGGTGCACC
CACTTAGAAAAGGAATCTCAGTTCTTGAGCCGCCAGTGAGATCTGTATCACCAAATTTTT
CGGCTTCAGAACAAGAAAACCAGTCCCCCACATCAGTATTATCAGCAGTTGGTTCAGAGA
CACTGGGTTCCACACTTTCAAATACACAGAATGGTAGCCCATCTCCAGTTTCATCTGCGG
CTGGTGTCAACCCAGATAGAATGTTTCTCCCTGAACTCAATCCACCAACCGAGGAAAATG
CATCTCCATCCCCGGTCTTAACGACATCTAGCTCTGTTCCGGATGAACCTTTACCCATGA
AGTTCGAGTTGTTTCCACAGGAAATATTTGCTAAAGAATGTTCGGTCGAGGAAGCATCCA
CCCGAACTCTTAAGCTATTTGGGAGGACTGTATTAGTGACAGATTCCCACAGGCCATCTT
CTCCAACAACCTCTAAGTCTCAGCCTTCAGACATTAATAACGAGGGAATGCATGTTGAAA
CATTACCATGGAACTCAACACCCACAGAATCTTCTCCCGAGAATTCAAGTTTTTCATGGA
GTCATTTGCAACCTCAACCATCAGGGGCTTTCTATTACATGCATTTCCAGAAAGAGGATT
CAAATTGTGTAGAAGCTGGTACCACTGCTCCCCTGCCATGGTGGACCTTTTATGGGGGCA
TACCAATTCCTTTCCTTCCGCTCCATCATCAGGACTCGATCAAAGCACATGAAGACACAA
AATTTGCTGAAACTCATGACAAAGAGATTCAGAAGGAAGGATCTTGGACAGGGTCAAATA
CTGGATCAAGCCACCAACCTTATTTAGACACGATGGAAAAAGAATCAGACTCAGCTTTCG
AGTTAAAGTTGAGCGAGAGATCAGCCTTCTCTAGAGGAAGAACAAACACGGACAAGTGTG
TGAAGGGGTTTATGCCATATAAAAGATGTTTGGCAGAGAGAGACACCCAGTCATCAATAA
TAATTGGGAACGAGAGGGAGGAGCAGAGGATCCGCCTTTGCTTGTAGCGTCTCTCACTGG
AAAGAAATCCCCTAGAGCGCAGTTTCCCTTTTAGTGCATAGATTTTTTTTTGACAGATTC
AGAAACTGATTCAGGTACCGTTAAAGAAGAAAATGGGGCAGTAAAACGGCAGCCATTTCT
GAAGCTTTGCAAAGTCTCTTCTACTTCTACTAGTACTACCTTTTCCCCTCATCTGTTCAA
ATCCATAACCCTACTCCTTTACTTGCAATCTCTTTTGGCCTTTCGGAATTAGCTTTTATA
TTCCTTTTTAATTCTTTTTGCCTTTGTTGAAATGTGAATCCTTGATCACACTCTAATTCT
GGTAATGTCCTGGACACCTATGATTGGAGGATAAATTTACATAAAGTGCAGCATTTTCGA
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