Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_04s0069g00890.t01
CDS Infomation	cds chromosome:12X:4:9060410:9111502:1 gene:VIT_04s0069g00890 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein [Source:UniProtKB/TrEMBL;Acc:F6H9I4]
Sequence	ATGTATATAAAGCAGGTTATTATCGAGGGTTTTAAGAGCTACAGAGAGCAAATTGCTACT GAACCTTTCAGTTCAAAAGTTAATTGCGTAGTTGGCGCTAATGGATCTGGCAAGACGAAT TTTTTCCATGCGATTCGTTTCGTACTAAGTGATCTCTTCCAAAACCTGCGCAGTGAAGAT AGACATGCACTACTTCATGAAGGTGCAGGACATCAAGTTCTATCCGCTTTTGTGGAGATT GTGTTTGATAATTCTGACAATCGCATTCCGGTTGACAAAGAGGAGGTGCGCTTACGAAGA ACTATTGGTCTGAAAAAGGATGAGTATTTCTTGGATGGAAAGCATATTACGAAAACAGAA GTTATGAATTTACTGGAAAGTGCTGGTTTCTCTCGTTCCAATCCTTACTATGTTGTGCAG CAAGGGAAGATAGCATCACTAACATTGATGAAAGACTCTGAGCGACTGGATCTGCTGAAG GAAATTGGTGGCACCCGAGTTTATGAGGAGAGACGACGTGAAAGTCTGAAAATTATGCAA GAAACTGGTAACAAGAGAAAGCAGATAATTCAAGTCGTTCAATACTTGGATGAGCGATTA AAGGAACTGGATGAAGAGAAAGAGGAACTGAGAAAATATCAGCAGCTGGACAAGCAGCGG AAATCTCTAGAATACACTATTTATGACAAGGAACTCCATGATGCTAGGCATAAATTGGGG GAGGTTGAAGAGGCTCGAACCAAAGTTTCTGAAACGTCTACAAGGATGTATAACAGTGTT CTGGAAGCCCATGAAAAGTCTAAGGACTTGGATAAGACATATAAAGATCTAACAAAAGAT GTTCAAGGTTTAAACAAAGAGAAAGAATCAACTGACAAGCAGCGATCTGAGGCAATACAG AAGCGCACACAGCTTGAACTTGATGATAAAGATCTAAGAGAAAAAATGTCTGTGAATATT AAGGCCAAGGAGGATGCAGCAAAACAGCTTGAGATTCTACAGAGAGAAATTCAAGACTCA ACAGAGGAGCTTCACAAAATTACTCCTTTGTACGATGAGAAAGTCATAGAGGAGAAGGAG ATATCTAAAGGAATAATGGAGCGTGAAAAGCAGCTTAGCATTCTTTATCAAAAACAAGGT CGAGCTACTCAATTTTCTAGCAAAGCTTCACGTGATAAATGGCTTCAAAAGGAAATTGAT GATCTTGAACGAGTTCGTTCTTCGAATATGGTTCAGGAGAAAAAACTCCAGGATGAAATT CATCAACTCAATGCCGAGGTGAAAGAAAGAGATATCTACATTGATAGTCGCAAAAAGGAA ATCGAATTGTTACAATCACTCATCTCTCAGTCTCGTGATGGTTTCAACGATTACAAGGCA CAGAGAGACAAGCTGCAGGATGAGCGGAAGTCCTTATGGGGGAAAGAAAGTGAACTCTCT GCTGAAATTGATAAGCTAAAGACAGAAGTTGTAAAAGCCGAAAAGAGTCTTGACCATGCA ACTCCTGGTGATATTAGGAGAGGACTGAATTCTGTTCGGAGGATATGCAGAGAGTTTGAA ATTCATGGAGTCTTTGGTCCAATTTTTGAGTTACTTGACTGTGATGAAAAATTTTTCACT GCTGTCGAAGTTACTGCTGGAAACAGCTTATTCCATGTGGTGGTTGAAACTGATGAAGTA TCAACCCAGATAATTAGGCACCTTAATGCATTGAAAGGTGGACGGGTTACTTTTATACCA CTGAATAGGGTGAAGGCTCCACATGTGGCTTATCCGCAGAGCTCTGATGTGATACCTTTA TTGAAGAAATTGAAATTCTCACCTAATTATACTCCAGCTTTTGCCCAGGTATTTGCTAGA ACAGTGATTTGCCGGGATTTGGATGTCGCTACAAGGGTTGCTCGTACTGATGGTTTAGAT TGTATAACCTTAGAAGGTGATCAAGTAAGCAAGAAAGGTGGAATGACTGGGGGATTTTAC GATTATAGGCGCTCAAAACTGAAATTTATGAATATAATTAGGCAGAACTCAAAGTCCATC AACATGAAGGAAGATGAGCTGGAGAAAGTTAGGTTTAAGCTTCAAGATATCCTTTACGCT AATGAATTTCATATAGATCAAAAAATTACAGAGCTAGTCACTGAGCAGCAGAAAATTGAT GCCAAGCAGGCTCATGACAGATCAGAATTGGAGCAACTAAAGCAGGACATTCTTAATGCT AATAAGCAGAAAGAGTCCATTTATAAAGCTCTTCAAAAGAAGGAAAAGTTGCTTGCAGAT GTTCGGACTCAAATTGAGCAGCTCAAAGCCAGTATGGCTATGAAACAGGCTGAAATGGGT ACGGATCTCATTGATCACTTAACACCGGAAGAAAAAGATCTGTTATCACGATTGAATCCT GAAATAACAGACCTGAAAGATCAGCTTATCACATGCAGAACGGATCGCATAGAGATTGAA ACAAGAAAAGCAGAGCTTGAGACCAATCTAACCACCAACCTTGTTAGACGGAAGCTAGAA TTAGAGGCTATAATATCTTCTGCAGAGACTGACATTTGGAGTGGGGAAGCTGAGTTGAAG AGGCAAGAACTAAAGGAGGCTAAGTTGTTGGTTGAAGATTTGACGCAGCGGCTCAAAAGA GTTTCTGAAAATATAGATGAACGAACAAAGCAACTGAGGAAGATCAAAGATGAAAAAAAT AAGTTAAAGAGTTTGGAAGACAACTATGAGAGGACGCTCCAGGATGAAGCAAAAGAACTA GAGCAATTATTAAGTAAAAGAAATCTTCTTCTTGCTAAACAAGAAGATTACTCAAAGAAA ATCAGAGAATTGGGTCCACTATCCTCAGATGCTTTTGACACATACAAAAGGAAGAGCATC AAAGAATTGCATAAAATGCTTCACAAGTGCAATGAGCAACTCCAACAGTTCAGCCATGTA AACAAGAAAGCACTTGATCAATATATAAATTTCACAGAGCAACGGGAAGAACTCCAGAAA AGGCAAGCAGAATTGGATGCAGGTGATGAGAAAATTAGAGAACTTATATCAGTTCTGGAT CAACGGAAGGATGAATCGATAGAGCGGACGTTCAAAGGCGTTGCTAGGCACTTTCGAGAA GTATTCTCTGAACTTGTACAAGGTGGCCATGGGTTTTTGGTTATGATGAAGAAAAAGGAT GGTGATCATGGTGATGATGACCATGATGAGGATGGGCCTCGTGAAGCTGACATGGAAGGA AGAGTTGAAAAATACATTGGTGTGAAAGTGAAGGTTTCTTTTACTGGGCAAGGGGAGACA CAGTCAATGAAGCAATTGTCAGGGGGTCAAAAAACAGTAGTAGCCCTGACACTAATCTTT GCCATACAACGATGTGATCCTGCTCCTTTTTATCTTTTTGATGAGATAGATGCTGCCCTT GATCCTCAGTATAGAACTGCTGTTGGAAATATGATTCGTCGCCTGGCAGACATGGCTAAT ACTCAGTTCATAACCACAACATTCCGTCCGGAGCTTGTGAAAGTTGCTGACAAGATATAT GGGGTGACACATAAAAACAGAGTCAGCCATGTCAATGTTGTCTCCAAGGAAGATGCATTA GATTTTATTGAGCATGATCAGTCTCACAACACTGATTAA

Peptide Sequence

PEP ID	VIT_04s0069g00890.t01
PEP Infomation	pep chromosome:12X:4:9060410:9111502:1 gene:VIT_04s0069g00890 transcript:VIT_04s0069g00890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein [Source:UniProtKB/TrEMBL;Acc:F6H9I4]
Sequence	MYIKQVIIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDARHKLG EVEEARTKVSETSTRMYNSVLEAHEKSKDLDKTYKDLTKDVQGLNKEKESTDKQRSEAIQ KRTQLELDDKDLREKMSVNIKAKEDAAKQLEILQREIQDSTEELHKITPLYDEKVIEEKE ISKGIMEREKQLSILYQKQGRATQFSSKASRDKWLQKEIDDLERVRSSNMVQEKKLQDEI HQLNAEVKERDIYIDSRKKEIELLQSLISQSRDGFNDYKAQRDKLQDERKSLWGKESELS AEIDKLKTEVVKAEKSLDHATPGDIRRGLNSVRRICREFEIHGVFGPIFELLDCDEKFFT AVEVTAGNSLFHVVVETDEVSTQIIRHLNALKGGRVTFIPLNRVKAPHVAYPQSSDVIPL LKKLKFSPNYTPAFAQVFARTVICRDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY DYRRSKLKFMNIIRQNSKSINMKEDELEKVRFKLQDILYANEFHIDQKITELVTEQQKID AKQAHDRSELEQLKQDILNANKQKESIYKALQKKEKLLADVRTQIEQLKASMAMKQAEMG TDLIDHLTPEEKDLLSRLNPEITDLKDQLITCRTDRIEIETRKAELETNLTTNLVRRKLE LEAIISSAETDIWSGEAELKRQELKEAKLLVEDLTQRLKRVSENIDERTKQLRKIKDEKN KLKSLEDNYERTLQDEAKELEQLLSKRNLLLAKQEDYSKKIRELGPLSSDAFDTYKRKSI KELHKMLHKCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISVLD QRKDESIERTFKGVARHFREVFSELVQGGHGFLVMMKKKDGDHGDDDHDEDGPREADMEG RVEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAAL DPQYRTAVGNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSHVNVVSKEDAL DFIEHDQSHNTD

Transcript Sequence

Transcript ID	VIT_04s0069g00890.t01
Transcript Infomation	cdna chromosome:12X:4:9060410:9111502:1 gene:VIT_04s0069g00890 gene_biotype:protein_coding transcript_biotype:protein_coding description:Structural maintenance of chromosomes protein [Source:UniProtKB/TrEMBL;Acc:F6H9I4]
Sequence	AATATAAAAACAATTCGGGAGAAGAGAAGGAATTAGAACTGGAGAGAAGAAAGACCGAAG AACAAAGAGGGAGTCGAGGACCATACCTGGAGTTCTCGTCGGAGCAACGGGAAGATACCG AAGCTTCCTATGCCGGAGTAACCCGCCGTCGACAGTCCACCGACTGTGAGTTAAGAGCTA GGGTTGTTTGTGTTTTTCTGCTGTTCTTCTAGAGAAATTGGATGACCCGGCATTATCAGC ATGTATATAAAGCAGGTTATTATCGAGGGTTTTAAGAGCTACAGAGAGCAAATTGCTACT GAACCTTTCAGTTCAAAAGTTAATTGCGTAGTTGGCGCTAATGGATCTGGCAAGACGAAT TTTTTCCATGCGATTCGTTTCGTACTAAGTGATCTCTTCCAAAACCTGCGCAGTGAAGAT AGACATGCACTACTTCATGAAGGTGCAGGACATCAAGTTCTATCCGCTTTTGTGGAGATT GTGTTTGATAATTCTGACAATCGCATTCCGGTTGACAAAGAGGAGGTGCGCTTACGAAGA ACTATTGGTCTGAAAAAGGATGAGTATTTCTTGGATGGAAAGCATATTACGAAAACAGAA GTTATGAATTTACTGGAAAGTGCTGGTTTCTCTCGTTCCAATCCTTACTATGTTGTGCAG CAAGGGAAGATAGCATCACTAACATTGATGAAAGACTCTGAGCGACTGGATCTGCTGAAG GAAATTGGTGGCACCCGAGTTTATGAGGAGAGACGACGTGAAAGTCTGAAAATTATGCAA GAAACTGGTAACAAGAGAAAGCAGATAATTCAAGTCGTTCAATACTTGGATGAGCGATTA AAGGAACTGGATGAAGAGAAAGAGGAACTGAGAAAATATCAGCAGCTGGACAAGCAGCGG AAATCTCTAGAATACACTATTTATGACAAGGAACTCCATGATGCTAGGCATAAATTGGGG GAGGTTGAAGAGGCTCGAACCAAAGTTTCTGAAACGTCTACAAGGATGTATAACAGTGTT CTGGAAGCCCATGAAAAGTCTAAGGACTTGGATAAGACATATAAAGATCTAACAAAAGAT GTTCAAGGTTTAAACAAAGAGAAAGAATCAACTGACAAGCAGCGATCTGAGGCAATACAG AAGCGCACACAGCTTGAACTTGATGATAAAGATCTAAGAGAAAAAATGTCTGTGAATATT AAGGCCAAGGAGGATGCAGCAAAACAGCTTGAGATTCTACAGAGAGAAATTCAAGACTCA ACAGAGGAGCTTCACAAAATTACTCCTTTGTACGATGAGAAAGTCATAGAGGAGAAGGAG ATATCTAAAGGAATAATGGAGCGTGAAAAGCAGCTTAGCATTCTTTATCAAAAACAAGGT CGAGCTACTCAATTTTCTAGCAAAGCTTCACGTGATAAATGGCTTCAAAAGGAAATTGAT GATCTTGAACGAGTTCGTTCTTCGAATATGGTTCAGGAGAAAAAACTCCAGGATGAAATT CATCAACTCAATGCCGAGGTGAAAGAAAGAGATATCTACATTGATAGTCGCAAAAAGGAA ATCGAATTGTTACAATCACTCATCTCTCAGTCTCGTGATGGTTTCAACGATTACAAGGCA CAGAGAGACAAGCTGCAGGATGAGCGGAAGTCCTTATGGGGGAAAGAAAGTGAACTCTCT GCTGAAATTGATAAGCTAAAGACAGAAGTTGTAAAAGCCGAAAAGAGTCTTGACCATGCA ACTCCTGGTGATATTAGGAGAGGACTGAATTCTGTTCGGAGGATATGCAGAGAGTTTGAA ATTCATGGAGTCTTTGGTCCAATTTTTGAGTTACTTGACTGTGATGAAAAATTTTTCACT GCTGTCGAAGTTACTGCTGGAAACAGCTTATTCCATGTGGTGGTTGAAACTGATGAAGTA TCAACCCAGATAATTAGGCACCTTAATGCATTGAAAGGTGGACGGGTTACTTTTATACCA CTGAATAGGGTGAAGGCTCCACATGTGGCTTATCCGCAGAGCTCTGATGTGATACCTTTA TTGAAGAAATTGAAATTCTCACCTAATTATACTCCAGCTTTTGCCCAGGTATTTGCTAGA ACAGTGATTTGCCGGGATTTGGATGTCGCTACAAGGGTTGCTCGTACTGATGGTTTAGAT TGTATAACCTTAGAAGGTGATCAAGTAAGCAAGAAAGGTGGAATGACTGGGGGATTTTAC GATTATAGGCGCTCAAAACTGAAATTTATGAATATAATTAGGCAGAACTCAAAGTCCATC AACATGAAGGAAGATGAGCTGGAGAAAGTTAGGTTTAAGCTTCAAGATATCCTTTACGCT AATGAATTTCATATAGATCAAAAAATTACAGAGCTAGTCACTGAGCAGCAGAAAATTGAT GCCAAGCAGGCTCATGACAGATCAGAATTGGAGCAACTAAAGCAGGACATTCTTAATGCT AATAAGCAGAAAGAGTCCATTTATAAAGCTCTTCAAAAGAAGGAAAAGTTGCTTGCAGAT GTTCGGACTCAAATTGAGCAGCTCAAAGCCAGTATGGCTATGAAACAGGCTGAAATGGGT ACGGATCTCATTGATCACTTAACACCGGAAGAAAAAGATCTGTTATCACGATTGAATCCT GAAATAACAGACCTGAAAGATCAGCTTATCACATGCAGAACGGATCGCATAGAGATTGAA ACAAGAAAAGCAGAGCTTGAGACCAATCTAACCACCAACCTTGTTAGACGGAAGCTAGAA TTAGAGGCTATAATATCTTCTGCAGAGACTGACATTTGGAGTGGGGAAGCTGAGTTGAAG AGGCAAGAACTAAAGGAGGCTAAGTTGTTGGTTGAAGATTTGACGCAGCGGCTCAAAAGA GTTTCTGAAAATATAGATGAACGAACAAAGCAACTGAGGAAGATCAAAGATGAAAAAAAT AAGTTAAAGAGTTTGGAAGACAACTATGAGAGGACGCTCCAGGATGAAGCAAAAGAACTA GAGCAATTATTAAGTAAAAGAAATCTTCTTCTTGCTAAACAAGAAGATTACTCAAAGAAA ATCAGAGAATTGGGTCCACTATCCTCAGATGCTTTTGACACATACAAAAGGAAGAGCATC AAAGAATTGCATAAAATGCTTCACAAGTGCAATGAGCAACTCCAACAGTTCAGCCATGTA AACAAGAAAGCACTTGATCAATATATAAATTTCACAGAGCAACGGGAAGAACTCCAGAAA AGGCAAGCAGAATTGGATGCAGGTGATGAGAAAATTAGAGAACTTATATCAGTTCTGGAT CAACGGAAGGATGAATCGATAGAGCGGACGTTCAAAGGCGTTGCTAGGCACTTTCGAGAA GTATTCTCTGAACTTGTACAAGGTGGCCATGGGTTTTTGGTTATGATGAAGAAAAAGGAT GGTGATCATGGTGATGATGACCATGATGAGGATGGGCCTCGTGAAGCTGACATGGAAGGA AGAGTTGAAAAATACATTGGTGTGAAAGTGAAGGTTTCTTTTACTGGGCAAGGGGAGACA CAGTCAATGAAGCAATTGTCAGGGGGTCAAAAAACAGTAGTAGCCCTGACACTAATCTTT GCCATACAACGATGTGATCCTGCTCCTTTTTATCTTTTTGATGAGATAGATGCTGCCCTT GATCCTCAGTATAGAACTGCTGTTGGAAATATGATTCGTCGCCTGGCAGACATGGCTAAT ACTCAGTTCATAACCACAACATTCCGTCCGGAGCTTGTGAAAGTTGCTGACAAGATATAT GGGGTGACACATAAAAACAGAGTCAGCCATGTCAATGTTGTCTCCAAGGAAGATGCATTA GATTTTATTGAGCATGATCAGTCTCACAACACTGATTAAGGT