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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0044g02040.t01
CDS Infomation

cds chromosome:12X:4:23831996:23843565:1 gene:VIT_04s0044g02040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:A5AU65]
Sequence

ATGTCTTGGTGCACCATTGAGTCTGATCCTGGTGTCTTTACGGAACTTATACAACAAATG
CAAGTGAAAGGTGTCCAGGTTGAGGAGTTGTATTCGTTGGACCTTGATTCTCTGAACCAT
CTTAGGCCAGTATATGGATTGATTTTTCTTTTCAAGTGGCGTCCAGGGGAAAAGGATGAC
CGTCTTGTAATCAAGGACCCAAACCCTAATTTATTTTTTGCCAGTCAGGTTATTAACAAC
GCATGTGCAACCCAAGCAATCCTGTCTATTCTCATGAATTGTCCAGATGTTGACATTGGT
CCAGAGTTGTCAATGTTAAAAGAATTCACCAAGAACTTCCCCCCTGAACTCAAAGGGTTG
GCTATCAATAACAGTGAAGCCATACGAACAGCCCATAACAGTTTTGCAAGACCTGAGCCC
TTTGTTCCAGAGGAGCAGAAGGCTGCTGGGAAAGATGATGATGTATACCATTTCATAAGC
TATCTACCAGTTGATGGCATTCTGTATGAATTGGATGGATTGAAGGAGGGACCCATTAGC
CTGGGTCAATGCCCTGGTGGACAAGGTGACTTAGATTGGGTGCGTATGGTGCAACCAGTG
ATTCAGGAACGCATTGAAAGATATTCCAGAAGTGAGATCAGATTTAACCTCATGGCTATC
ATAAAGAATAGGAAAGATATATATACTGGCGAGCTGAAAGAGCTGCAGAAGAGGAGGGAA
CACATTTTGCACCAGTTGGCAGCCTTACAGTCAGAGAGAATGGTGGATAATAGCAACATT
GAAGCTTTAAATAAATCCTTATCAGAAGTAAATGCTGGAATTGAGGGTGCTACAGAGAAG
ATATTAATGGAGGAGGAAAAATTCAAGAAGTGGAGAACGGAAAACATCCGCAGGAAACAC
AACTACATTCCCTTCTTATTTAATTTTCTCAAGATTCTTGCTGAAAAGAAGCAGTTGAAA
CCTCTTATAGAGAAAGCCAAGCAGAAAACAAACAACAGTAGGTGA

Peptide Sequence

PEP ID

VIT_04s0044g02040.t01
PEP Infomation

pep chromosome:12X:4:23831996:23843565:1 gene:VIT_04s0044g02040 transcript:VIT_04s0044g02040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:A5AU65]
Sequence

MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNHLRPVYGLIFLFKWRPGEKDD
RLVIKDPNPNLFFASQVINNACATQAILSILMNCPDVDIGPELSMLKEFTKNFPPELKGL
AINNSEAIRTAHNSFARPEPFVPEEQKAAGKDDDVYHFISYLPVDGILYELDGLKEGPIS
LGQCPGGQGDLDWVRMVQPVIQERIERYSRSEIRFNLMAIIKNRKDIYTGELKELQKRRE
HILHQLAALQSERMVDNSNIEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKH
NYIPFLFNFLKILAEKKQLKPLIEKAKQKTNNSR

Transcript Sequence

Transcript ID

VIT_04s0044g02040.t01
Transcript Infomation

cdna chromosome:12X:4:23831996:23843565:1 gene:VIT_04s0044g02040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:A5AU65]
Sequence

ACACCAAAGCATCGTATCGTTCCTCCTCCAAACGCTGCGTTTCGGTCTATCTCTGAGTTC
CAAGCACCCCTATATTTCTAATCATGTCTTGGTGCACCATTGAGTCTGATCCTGGTGTCT
TTACGGAACTTATACAACAAATGCAAGTGAAAGGTGTCCAGGTTGAGGAGTTGTATTCGT
TGGACCTTGATTCTCTGAACCATCTTAGGCCAGTATATGGATTGATTTTTCTTTTCAAGT
GGCGTCCAGGGGAAAAGGATGACCGTCTTGTAATCAAGGACCCAAACCCTAATTTATTTT
TTGCCAGTCAGGTTATTAACAACGCATGTGCAACCCAAGCAATCCTGTCTATTCTCATGA
ATTGTCCAGATGTTGACATTGGTCCAGAGTTGTCAATGTTAAAAGAATTCACCAAGAACT
TCCCCCCTGAACTCAAAGGGTTGGCTATCAATAACAGTGAAGCCATACGAACAGCCCATA
ACAGTTTTGCAAGACCTGAGCCCTTTGTTCCAGAGGAGCAGAAGGCTGCTGGGAAAGATG
ATGATGTATACCATTTCATAAGCTATCTACCAGTTGATGGCATTCTGTATGAATTGGATG
GATTGAAGGAGGGACCCATTAGCCTGGGTCAATGCCCTGGTGGACAAGGTGACTTAGATT
GGGTGCGTATGGTGCAACCAGTGATTCAGGAACGCATTGAAAGATATTCCAGAAGTGAGA
TCAGATTTAACCTCATGGCTATCATAAAGAATAGGAAAGATATATATACTGGCGAGCTGA
AAGAGCTGCAGAAGAGGAGGGAACACATTTTGCACCAGTTGGCAGCCTTACAGTCAGAGA
GAATGGTGGATAATAGCAACATTGAAGCTTTAAATAAATCCTTATCAGAAGTAAATGCTG
GAATTGAGGGTGCTACAGAGAAGATATTAATGGAGGAGGAAAAATTCAAGAAGTGGAGAA
CGGAAAACATCCGCAGGAAACACAACTACATTCCCTTCTTATTTAATTTTCTCAAGATTC
TTGCTGAAAAGAAGCAGTTGAAACCTCTTATAGAGAAAGCCAAGCAGAAAACAAACAACA
GTAGGTGATTTCTTTTTCGCCCCCCCATGATGTAATTGCTGGTACAAGGATCCTTTCTGT
TCTAGACTTTCGTAGTATCCCTCCACCACAAAAAGAAGAGTTTAGGAAGACTTGTTTTTG
CTGTTAATTTCCTCGGTTTATGACGTGACTACAAACATGGTTTGTTTCTTTTGGTAGATG
CAGAGCTAAGCCCCTGAATTGTTTTTTTTTTTTATGCATTTAACATCCTGGATGTATGAT
CTGATATAGAAATGTTAAATGCCCC