Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0044g01420.t01
CDS Infomation

cds chromosome:12X:4:22947573:22951152:-1 gene:VIT_04s0044g01420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGGTTTTACCAGGCCTTCATGGGCATTTCTGCTACTTGTATTTATAGTTCTAGTC
GTTTCCTGTTTCCAAATCGGCACCAAAACGGTTTTCCCGAGATGGGTCGTGTTGGGCGGC
GGAGAAACCGGAATATCGGAAGAAGCACCCAGCTGTTTCGGGCTTTTCCGGGAGGTGCCG
CCGAGGAAGGTGGTGATGTCGATAAGAGATTTCGGTGGGGTGGGCGACGGCGTGACGTCC
AATACCGAAACGTTTCGGAGGGCTATACGGTACATGCAAAGTTTCGGAAACATAGGTGGG
TCCCAGCTTAACGTTCCAAGAGGAAGATGGGTTACGGGAAGCTTCAATCTCACCAGCAAT
TTCACCCTTTTTCTGGAAGAGGGTGCTGTGATTCTGGGTTCCCAGGATTTGGAGGACTGG
CCAATCATAGAGCCTTTGCCTTCATATGGAAGAGGAAGAGAGAGATTAGGTGGAAGACAT
ATTAGTCTTATCCATGGAGATGCTCTCGCCAATGTTGTCATTACTGGACAGAATGGAACA
ATTGATGGTCAAGGAAAGATGTGGTGGGAGCTGTGGTGGAACAGGACATTGGAGCACACC
CGAGGCCACCTGCTTGAAATTAAGAACTCTCACAACATTCTCATCTCAAACCTCACCTTC
ATGAACTCTCCTTTCTGGACTATCCATCCTGTTTACTGCAGCAATGTTGTTATCAAAGAC
GTGACAATCTTGGCTCCTCTTAATGCCCCAAACACTGATGGTATTGATCCAGACTCAAGT
ACCAATGTCTGCATTGAAGACTGTTATATTGAGAGCGGGGATGATCTTGTAGCAGTGAAA
AGTGGGTGGGATCAGTACGGCATTGCCATGGCTCGTCCAAGCTCAAACATCATAGTGAGG
AGGCTTTCAGGGACTACTCCAACGTGTTCTGGGGTTGGAATAGGCAGTGAGATGTCAGGT
GGAATTTCAAATGTCACTATGGAGGATTTGCATATTTGGGATTCTGCAGCTGGGGTACGA
ATAAAGACTGATAAGGGGAGAGGAGGATATGTGGTAAATATTACCATAAATAACATAAGA
ATGGAGAGAGTTAAGGTACCTATAAGGTTCAGTAGAGGCTCCAATGACCACCCTGATGAC
GGATGGGACCCAAAAGCTGTCCCAAAAATAAAGGGTATTTTTATAAGTAATGTGGTCAGT
TTGAATTCAACGAAAGCCCCACTCTTGGAGGGTATTGAGGGTGCACCTTATGAAGGGATA
TGCATGAAAAATGTTACTCTACTTGGTCTTGCTCCAGCAGCAAAATGGCACTGCGAATTT
GTCTCAGGTTTTACAGATGCGGTCTTTCCAGTGTCATGTCCCCAGATGCAGAGCAATGTT
TCTTCATCATGGTGTTTAGACCACCTTGGAAATTTACAAATTGATAGCAGCAGGAAATCT
AGCAGGAAATCTGTGACATTAGGGATGGCAATGGGACAGTCCCAACAGAATCCTGAACTC
ATCAGGGAGCTAACCCCTACTCACCCCAATCTGCCTACTAAGGGAATGGTTTGA

Peptide Sequence

PEP ID

VIT_04s0044g01420.t01
PEP Infomation

pep chromosome:12X:4:22947573:22951152:-1 gene:VIT_04s0044g01420 transcript:VIT_04s0044g01420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGFTRPSWAFLLLVFIVLVVSCFQIGTKTVFPRWVVLGGGETGISEEAPSCFGLFREVP
PRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSN
FTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGT
IDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKD
VTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVR
RLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIR
MERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGI
CMKNVTLLGLAPAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSSWCLDHLGNLQIDSSRKS
SRKSVTLGMAMGQSQQNPELIRELTPTHPNLPTKGMV

Transcript Sequence

Transcript ID

VIT_04s0044g01420.t01
Transcript Infomation

cdna chromosome:12X:4:22947573:22951152:-1 gene:VIT_04s0044g01420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGCAATGGGTGGTTTTACCAGGCCTTCATGGGCATTTCTGCTACTTGTATTTATAGTTC
TAGTCGTTTCCTGTTTCCAAATCGGCACCAAAACGGTTTTCCCGAGATGGGTCGTGTTGG
GCGGCGGAGAAACCGGAATATCGGAAGAAGCACCCAGCTGTTTCGGGCTTTTCCGGGAGG
TGCCGCCGAGGAAGGTGGTGATGTCGATAAGAGATTTCGGTGGGGTGGGCGACGGCGTGA
CGTCCAATACCGAAACGTTTCGGAGGGCTATACGGTACATGCAAAGTTTCGGAAACATAG
GTGGGTCCCAGCTTAACGTTCCAAGAGGAAGATGGGTTACGGGAAGCTTCAATCTCACCA
GCAATTTCACCCTTTTTCTGGAAGAGGGTGCTGTGATTCTGGGTTCCCAGGATTTGGAGG
ACTGGCCAATCATAGAGCCTTTGCCTTCATATGGAAGAGGAAGAGAGAGATTAGGTGGAA
GACATATTAGTCTTATCCATGGAGATGCTCTCGCCAATGTTGTCATTACTGGACAGAATG
GAACAATTGATGGTCAAGGAAAGATGTGGTGGGAGCTGTGGTGGAACAGGACATTGGAGC
ACACCCGAGGCCACCTGCTTGAAATTAAGAACTCTCACAACATTCTCATCTCAAACCTCA
CCTTCATGAACTCTCCTTTCTGGACTATCCATCCTGTTTACTGCAGCAATGTTGTTATCA
AAGACGTGACAATCTTGGCTCCTCTTAATGCCCCAAACACTGATGGTATTGATCCAGACT
CAAGTACCAATGTCTGCATTGAAGACTGTTATATTGAGAGCGGGGATGATCTTGTAGCAG
TGAAAAGTGGGTGGGATCAGTACGGCATTGCCATGGCTCGTCCAAGCTCAAACATCATAG
TGAGGAGGCTTTCAGGGACTACTCCAACGTGTTCTGGGGTTGGAATAGGCAGTGAGATGT
CAGGTGGAATTTCAAATGTCACTATGGAGGATTTGCATATTTGGGATTCTGCAGCTGGGG
TACGAATAAAGACTGATAAGGGGAGAGGAGGATATGTGGTAAATATTACCATAAATAACA
TAAGAATGGAGAGAGTTAAGGTACCTATAAGGTTCAGTAGAGGCTCCAATGACCACCCTG
ATGACGGATGGGACCCAAAAGCTGTCCCAAAAATAAAGGGTATTTTTATAAGTAATGTGG
TCAGTTTGAATTCAACGAAAGCCCCACTCTTGGAGGGTATTGAGGGTGCACCTTATGAAG
GGATATGCATGAAAAATGTTACTCTACTTGGTCTTGCTCCAGCAGCAAAATGGCACTGCG
AATTTGTCTCAGGTTTTACAGATGCGGTCTTTCCAGTGTCATGTCCCCAGATGCAGAGCA
ATGTTTCTTCATCATGGTGTTTAGACCACCTTGGAAATTTACAAATTGATAGCAGCAGGA
AATCTAGCAGGAAATCTGTGACATTAGGGATGGCAATGGGACAGTCCCAACAGAATCCTG
AACTCATCAGGGAGCTAACCCCTACTCACCCCAATCTGCCTACTAAGGGAATGGTTTGA