Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0044g01300.t01
CDS Infomation

cds chromosome:12X:4:22821081:22829069:1 gene:VIT_04s0044g01300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCAGAGGCCTACCATTCTCAGTGGACACATGGACTCCATCTTCAAAGAAAAAGAGG
CACCATTTTCTCACTCATGCCCACAAAGACCACTCCTCTGGCATCTCCACCCACTCTGCA
TATCCAATTTACTCTACCCACCTCACCAAAACCCTAATTCTTCAACAATATCCCCAGCTT
GATGATTCATTGTTTGTGGGTATCGAGGTGGGACAGTCGATGGTTGTTGACGACCCGGAT
GGCAGATTTGGGGTCACGGCTTTTGATGCCAATCACTGCCCTGGAGCTGTAATGTTCTTG
TTTGAAGGCGATTTCGGTAACATCCTGCACACAGGAGATTGCAGACTCATCCCTGAGTGT
TTGCAAAACTTACCACAGAAGTATGTAACCAAGAAAGGAAAAGAGCCAAAGTGTCAGTTT
GATTATGTTTTCCTAGACTGCACGTTTGGGAGATCTTCTCTGCATATCCCCAGCAAGCAT
TTGGCTATCCAACAGGTTATCAATTGTATATGGAAGCACCCTGATGCCCCTATCGTGTAT
CTGTGCAGCGATATGCTAGGTCAGGAAGAGATTCTTATCAATGTGTCCAGAATATTTGGG
TCCAAGATATTTGTTGATAAAGCCAACAATCCTGAATGTTTCCAAGCTTTGACACATATG
GTTCCTGAAATTCTCTCTCAAGATCCATCTTCCCGCTTCCAAGTATTTGAAGGATTTCCT
AAGCTTTGTGAAAGAGCACAAGCAAAGCTTGCAGAGGCTCAAGCTAATTCCCTACCTGAG
CCTCTCATTATCCGCCCTTCAGCACAATGGTATGCATGTGAGGAAGACTTACCAAAGACT
GAAAGGCGAAAAAAGGAGAGCTTTAATGAAGCTGTAAGAGACCAGTTTGGCATTTGGCAT
GTCTGTTACTCAATTCATTCATCTAGGCAAGAATTAGAGTGGGCTCTGCAGCTTCTTGCA
CCCAAACGGGTTGTATCAACTACTCCCAGTTGCCGAGCTATGGAGCTGAATTATGTGAAA
AAACATTGCTTTAGCAGTCACATAACTTCCAGTGACCCTCTCTGGAAACTTCTAGACATT
GGTGTGGAAGCTTGTTCAAATCTGGATGCATCGGTTAAAGTTGTAGGTTGTTCACCTATG
ATGGAAGGTTCCAGCAAAACTTGTGCAGAATCTCAACTGCAACTGGTAAAAATATCTGCT
GCTACCCAGAAAGAACAGTTAGATTTGTCTACTCCAAGTGAAAGGCCACCTCTCACACTA
TTTGGAAAAGCTAGATTTGGTTTCCAAGATTCTACTTTTCAGCATGAACAGGAGAAAACA
ATGGTCATGAAATCTGATCCTCAACAAATAGTAACTAATAGAGCAGAAAATGAATCCTCA
AGCCAGGATGTTGAATTGGAATGTGAGAATTCCTTGGAGAAAAAAATAGAGGTAGATGTT
ACTGAAGTACCAAGTGAAAAGTTAGTGGAGAAAGAAACTGAAGTTTGCAAGATTGCTTCT
CAGGCCCCCATCATATTGTCAAGGGGCTTTAATGAAAGCTTGAGAAATTTGTACAGGTCA
ATGAATGTGTCTGTGCCTCAGCCTCTTCCCTCACTGGTGGAACTTATGAATTCCAATAAA
CGTGCCAAGAAGATGCGTTGGCGCTGA

Peptide Sequence

PEP ID

VIT_04s0044g01300.t01
PEP Infomation

pep chromosome:12X:4:22821081:22829069:1 gene:VIT_04s0044g01300 transcript:VIT_04s0044g01300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQYPQL
DDSLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGNILHTGDCRLIPEC
LQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVY
LCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFEGFP
KLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKTERRKKESFNEAVRDQFGIWH
VCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKHCFSSHITSSDPLWKLLDI
GVEACSNLDASVKVVGCSPMMEGSSKTCAESQLQLVKISAATQKEQLDLSTPSERPPLTL
FGKARFGFQDSTFQHEQEKTMVMKSDPQQIVTNRAENESSSQDVELECENSLEKKIEVDV
TEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPSLVELMNSNK
RAKKMRWR

Transcript Sequence

Transcript ID

VIT_04s0044g01300.t01
Transcript Infomation

cdna chromosome:12X:4:22821081:22829069:1 gene:VIT_04s0044g01300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTTTTTCCATCGTATTTTCTCTTACCATTTCTCCACCTTCCACACACCCACAACAAATA
GAGGATGCCAATAGAGATGCCCAGAGGCCTACCATTCTCAGTGGACACATGGACTCCATC
TTCAAAGAAAAAGAGGCACCATTTTCTCACTCATGCCCACAAAGACCACTCCTCTGGCAT
CTCCACCCACTCTGCATATCCAATTTACTCTACCCACCTCACCAAAACCCTAATTCTTCA
ACAATATCCCCAGCTTGATGATTCATTGTTTGTGGGTATCGAGGTGGGACAGTCGATGGT
TGTTGACGACCCGGATGGCAGATTTGGGGTCACGGCTTTTGATGCCAATCACTGCCCTGG
AGCTGTAATGTTCTTGTTTGAAGGCGATTTCGGTAACATCCTGCACACAGGAGATTGCAG
ACTCATCCCTGAGTGTTTGCAAAACTTACCACAGAAGTATGTAACCAAGAAAGGAAAAGA
GCCAAAGTGTCAGTTTGATTATGTTTTCCTAGACTGCACGTTTGGGAGATCTTCTCTGCA
TATCCCCAGCAAGCATTTGGCTATCCAACAGGTTATCAATTGTATATGGAAGCACCCTGA
TGCCCCTATCGTGTATCTGTGCAGCGATATGCTAGGTCAGGAAGAGATTCTTATCAATGT
GTCCAGAATATTTGGGTCCAAGATATTTGTTGATAAAGCCAACAATCCTGAATGTTTCCA
AGCTTTGACACATATGGTTCCTGAAATTCTCTCTCAAGATCCATCTTCCCGCTTCCAAGT
ATTTGAAGGATTTCCTAAGCTTTGTGAAAGAGCACAAGCAAAGCTTGCAGAGGCTCAAGC
TAATTCCCTACCTGAGCCTCTCATTATCCGCCCTTCAGCACAATGGTATGCATGTGAGGA
AGACTTACCAAAGACTGAAAGGCGAAAAAAGGAGAGCTTTAATGAAGCTGTAAGAGACCA
GTTTGGCATTTGGCATGTCTGTTACTCAATTCATTCATCTAGGCAAGAATTAGAGTGGGC
TCTGCAGCTTCTTGCACCCAAACGGGTTGTATCAACTACTCCCAGTTGCCGAGCTATGGA
GCTGAATTATGTGAAAAAACATTGCTTTAGCAGTCACATAACTTCCAGTGACCCTCTCTG
GAAACTTCTAGACATTGGTGTGGAAGCTTGTTCAAATCTGGATGCATCGGTTAAAGTTGT
AGGTTGTTCACCTATGATGGAAGGTTCCAGCAAAACTTGTGCAGAATCTCAACTGCAACT
GGTAAAAATATCTGCTGCTACCCAGAAAGAACAGTTAGATTTGTCTACTCCAAGTGAAAG
GCCACCTCTCACACTATTTGGAAAAGCTAGATTTGGTTTCCAAGATTCTACTTTTCAGCA
TGAACAGGAGAAAACAATGGTCATGAAATCTGATCCTCAACAAATAGTAACTAATAGAGC
AGAAAATGAATCCTCAAGCCAGGATGTTGAATTGGAATGTGAGAATTCCTTGGAGAAAAA
AATAGAGGTAGATGTTACTGAAGTACCAAGTGAAAAGTTAGTGGAGAAAGAAACTGAAGT
TTGCAAGATTGCTTCTCAGGCCCCCATCATATTGTCAAGGGGCTTTAATGAAAGCTTGAG
AAATTTGTACAGGTCAATGAATGTGTCTGTGCCTCAGCCTCTTCCCTCACTGGTGGAACT
TATGAATTCCAATAAACGTGCCAAGAAGATGCGTTGGCGCTGAAAGAACTGATCATCTTT
TTAAATAGTGCATGGGGTTACTCTCATTTGCATATGCAGTTCATTCTAGGTGAGATATCA
TCCCAGTTGCTTGAAGAGGAAGAGTAGAAGTAAGTTAAAAGAATAATGGAA