Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0044g01260.t01
CDS Infomation

cds chromosome:12X:4:22755236:22766461:1 gene:VIT_04s0044g01260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGCCATCGGGACCATCAACATCAATTGGTGGTTCCCAGTCTGCCTCGGCTGCACTC
CTGAGATCGAACTCAGGGATTTTGGCTCAAGGTGGTCCACAGGGAGCATATTCTTCACTT
TCTTCAGTTCGGCCACAGTATGACATGAATTTGGTCGGAAATGCACAAAACATCTCCTCT
GGCCTCAGTCAATCTCTTGGAAGTGGGGGTTCGAACTCTGGCCTCTCTCATTCAGGGAGT
TTTCAACATGGAGGCCTTGATACAGGACCTGAGTTTGATGCGCTTTCTATTGCAGCAAAT
GACATTGCTTTCGCTCCACCAGCTGCATCATTTCCACAACTGAACAGTGGGAATCCTGGT
TCATCCAGCCAAGTTCAAAACCAGCATCCTCTAAACTCTTCTGGGAATCAGGTATTGCCA
GATCAACTGCAATCTCAACTCCAACAGCTTGAGCGGCAGAAATTTCACCACGGACAGCAG
TTGCTGCAGCAATTCAGCCAACAGCAGCTACATCAATTGCACCCTCAACAGCAGCCATAT
CAAGCAACTCAAGGTGGGTCGGGGGGTGTGGGTGTGAATGATCAAAATTGCCCACAGCAA
CAGTTGCAATTATCACAACAGAACCAGGTTGGCAGAGGTATTCCGCCTGTCAAAATTCAA
CCTAATCGTTTAGACCAACAAATGTTTTTGCAGCAGCAACAGCAACGTCAACAATTTCTT
CACATGTCGAGGCAGTCTTCTCACGCTACTGCTGCTCAGTTGAATCTTTTGCAACAGCAG
CGTTTGTTGCAGCTGCAACAACAAAAGCAGCAACAACAATTGTTGAAGGCAACTCAGCAG
CAACCCCAATTGCAGCCCCAGTTTCAACAGCCAAATCTGCCTGCAAAACTGGTCTATGAA
CCTGGAATGTGTGCTCAGCGTTTAACTCAGTACATGATTCAGCAGAAGCATAGGCCTGAT
GGCAACAATATTGAATTCTGGCAGAAATTTGTTGCTGAATTTTTTGCTCCCAATGCAAAG
AAAAGATGGTGTATATCACAATATGGAAATAACCGACAAACAAATAGCCCTTTTCCTCAG
GATGTCTGGCACTGTGAAATATGCAATCGCAGGCCTGGTCGTGGTTTTGAAACAACTTTT
GAAGTTCTCCCCAGGCTATGCAAAATCAAGTATGACAGTGGCACTTTGGAAGAGCTTCTA
TATTTTGATATGCCCCATGAATATCAGGATGCAGCCGGTCAGATTGTACTAGACTTTGCT
AAAGCAGTACAAGAAAGTGTCTTTGAGCAACTACGTGTAGTTCGTGATGGGCAACTTCGT
ATTGTTTTCTCCCCAGATCTAAAGATCTGCTCTTGGCTGTTTTGTGCTCGGCATCATGAG
GAACTTATCCCTCGAAGATCAATCATACCTCAGGTTAGTCAGCTTGGAGTTGTGGCGCAA
AAATACCATGCTGCTGCTCAAAATCCATCAAACATTTCAATGCAAGAATTAAAAAATAAC
TGTAATACGTTTGTCTCATCAGCTCGTCAATTAGCAAAAGCATTGGAAGTGCCATTAGTT
AATGATTTAGGATATACAAAGAGATTTGTGCGGTGCCTTCAGATATCAGAGGTTGTGAAC
TGTATGAAAGATTTGATTGACTATAGCCGAGAAACCGAGAAAGGACCTATAGAATGTTTG
GCCGAGTTTCCTCGTAGAAGCAGCCGATCATCTGGGATGCATAACCAATTGGAGGAGGAG
CAACACCTTCAGCAGCAAAATACAAGGCAGAGGATGAATAATGATGATTATGCTTTAAGG
GGATCAGCCACTCAGGTTTCTGCCTGTAATGGTGTTCCAAGTGTCAGTAATGGCCACAGC
ATAACATCTACTTCAACATCTGCCACCGCAATTGTTGGGCTTCTCTGCCAGAATTCCATG
AACTCCAGGCATGAAAACCAGATGAATAATCCTAATAGTCCCTTTTCCGCAACTCCAGGT
CAGATCCCATCTGCTGGGTCCTCAACTACACCACCATCAACACAACTCAACCCCTCCTCT
CCTTTCTCGTGTCTGACACCATCCTCATCTCACAATCCCACTCCACTTTCTCAGACTGTC
TTAACAGCAGAAGCCACTGCAAACCACATCACTTCAGAAAATTCACCTACAAATATCCTT
TTCCAAAAATCCTCTGAGTCAAACGAGGCAGATCCAAATGAACACCTGAGCTCTGTTGAG
AGAATAATACAAGAAATTATGAGTTCATCACAGTTTAACAGTGCAGGTAGCATGATCAGT
GTAGGTTCCGTTGGAAACAATGTGAAAAATGGTAGTGGGATGACACAAATAAACCACAGT
TCTATTGGTGGTGGTGACAGCACAATGGGAAGCAGGATAAATAGCAATTCAAGTGTTGGG
GCTGCAGGATTTGGAAACTTTGATGGTGGAATTGGTGTCTCTGCCACAGTTAATAGAATC
AGAGCAACCATGGGGAATAACTCTATGACCTCAAGTGTTGAGGTAGGCATGCCATCGATG
CCTCAGGATGTTACTATGAACAATAAGCAACAGGATATGAAATCTCTCAATGGGGTTGGA
GGAGGATTAAATGATTTCAATAATCTCCGGTTCAACTAG

Peptide Sequence

PEP ID

VIT_04s0044g01260.t01
PEP Infomation

pep chromosome:12X:4:22755236:22766461:1 gene:VIT_04s0044g01260 transcript:VIT_04s0044g01260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMPSGPSTSIGGSQSASAALLRSNSGILAQGGPQGAYSSLSSVRPQYDMNLVGNAQNISS
GLSQSLGSGGSNSGLSHSGSFQHGGLDTGPEFDALSIAANDIAFAPPAASFPQLNSGNPG
SSSQVQNQHPLNSSGNQVLPDQLQSQLQQLERQKFHHGQQLLQQFSQQQLHQLHPQQQPY
QATQGGSGGVGVNDQNCPQQQLQLSQQNQVGRGIPPVKIQPNRLDQQMFLQQQQQRQQFL
HMSRQSSHATAAQLNLLQQQRLLQLQQQKQQQQLLKATQQQPQLQPQFQQPNLPAKLVYE
PGMCAQRLTQYMIQQKHRPDGNNIEFWQKFVAEFFAPNAKKRWCISQYGNNRQTNSPFPQ
DVWHCEICNRRPGRGFETTFEVLPRLCKIKYDSGTLEELLYFDMPHEYQDAAGQIVLDFA
KAVQESVFEQLRVVRDGQLRIVFSPDLKICSWLFCARHHEELIPRRSIIPQVSQLGVVAQ
KYHAAAQNPSNISMQELKNNCNTFVSSARQLAKALEVPLVNDLGYTKRFVRCLQISEVVN
CMKDLIDYSRETEKGPIECLAEFPRRSSRSSGMHNQLEEEQHLQQQNTRQRMNNDDYALR
GSATQVSACNGVPSVSNGHSITSTSTSATAIVGLLCQNSMNSRHENQMNNPNSPFSATPG
QIPSAGSSTTPPSTQLNPSSPFSCLTPSSSHNPTPLSQTVLTAEATANHITSENSPTNIL
FQKSSESNEADPNEHLSSVERIIQEIMSSSQFNSAGSMISVGSVGNNVKNGSGMTQINHS
SIGGGDSTMGSRINSNSSVGAAGFGNFDGGIGVSATVNRIRATMGNNSMTSSVEVGMPSM
PQDVTMNNKQQDMKSLNGVGGGLNDFNNLRFN

Transcript Sequence

Transcript ID

VIT_04s0044g01260.t01
Transcript Infomation

cdna chromosome:12X:4:22755236:22766461:1 gene:VIT_04s0044g01260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTCGGGTGTAAAAGTTCACCAAGATGATGCCATCGGGACCATCAACATCAATTGGTGG
TTCCCAGTCTGCCTCGGCTGCACTCCTGAGATCGAACTCAGGGATTTTGGCTCAAGGTGG
TCCACAGGGAGCATATTCTTCACTTTCTTCAGTTCGGCCACAGTATGACATGAATTTGGT
CGGAAATGCACAAAACATCTCCTCTGGCCTCAGTCAATCTCTTGGAAGTGGGGGTTCGAA
CTCTGGCCTCTCTCATTCAGGGAGTTTTCAACATGGAGGCCTTGATACAGGACCTGAGTT
TGATGCGCTTTCTATTGCAGCAAATGACATTGCTTTCGCTCCACCAGCTGCATCATTTCC
ACAACTGAACAGTGGGAATCCTGGTTCATCCAGCCAAGTTCAAAACCAGCATCCTCTAAA
CTCTTCTGGGAATCAGGTATTGCCAGATCAACTGCAATCTCAACTCCAACAGCTTGAGCG
GCAGAAATTTCACCACGGACAGCAGTTGCTGCAGCAATTCAGCCAACAGCAGCTACATCA
ATTGCACCCTCAACAGCAGCCATATCAAGCAACTCAAGGTGGGTCGGGGGGTGTGGGTGT
GAATGATCAAAATTGCCCACAGCAACAGTTGCAATTATCACAACAGAACCAGGTTGGCAG
AGGTATTCCGCCTGTCAAAATTCAACCTAATCGTTTAGACCAACAAATGTTTTTGCAGCA
GCAACAGCAACGTCAACAATTTCTTCACATGTCGAGGCAGTCTTCTCACGCTACTGCTGC
TCAGTTGAATCTTTTGCAACAGCAGCGTTTGTTGCAGCTGCAACAACAAAAGCAGCAACA
ACAATTGTTGAAGGCAACTCAGCAGCAACCCCAATTGCAGCCCCAGTTTCAACAGCCAAA
TCTGCCTGCAAAACTGGTCTATGAACCTGGAATGTGTGCTCAGCGTTTAACTCAGTACAT
GATTCAGCAGAAGCATAGGCCTGATGGCAACAATATTGAATTCTGGCAGAAATTTGTTGC
TGAATTTTTTGCTCCCAATGCAAAGAAAAGATGGTGTATATCACAATATGGAAATAACCG
ACAAACAAATAGCCCTTTTCCTCAGGATGTCTGGCACTGTGAAATATGCAATCGCAGGCC
TGGTCGTGGTTTTGAAACAACTTTTGAAGTTCTCCCCAGGCTATGCAAAATCAAGTATGA
CAGTGGCACTTTGGAAGAGCTTCTATATTTTGATATGCCCCATGAATATCAGGATGCAGC
CGGTCAGATTGTACTAGACTTTGCTAAAGCAGTACAAGAAAGTGTCTTTGAGCAACTACG
TGTAGTTCGTGATGGGCAACTTCGTATTGTTTTCTCCCCAGATCTAAAGATCTGCTCTTG
GCTGTTTTGTGCTCGGCATCATGAGGAACTTATCCCTCGAAGATCAATCATACCTCAGGT
TAGTCAGCTTGGAGTTGTGGCGCAAAAATACCATGCTGCTGCTCAAAATCCATCAAACAT
TTCAATGCAAGAATTAAAAAATAACTGTAATACGTTTGTCTCATCAGCTCGTCAATTAGC
AAAAGCATTGGAAGTGCCATTAGTTAATGATTTAGGATATACAAAGAGATTTGTGCGGTG
CCTTCAGATATCAGAGGTTGTGAACTGTATGAAAGATTTGATTGACTATAGCCGAGAAAC
CGAGAAAGGACCTATAGAATGTTTGGCCGAGTTTCCTCGTAGAAGCAGCCGATCATCTGG
GATGCATAACCAATTGGAGGAGGAGCAACACCTTCAGCAGCAAAATACAAGGCAGAGGAT
GAATAATGATGATTATGCTTTAAGGGGATCAGCCACTCAGGTTTCTGCCTGTAATGGTGT
TCCAAGTGTCAGTAATGGCCACAGCATAACATCTACTTCAACATCTGCCACCGCAATTGT
TGGGCTTCTCTGCCAGAATTCCATGAACTCCAGGCATGAAAACCAGATGAATAATCCTAA
TAGTCCCTTTTCCGCAACTCCAGGTCAGATCCCATCTGCTGGGTCCTCAACTACACCACC
ATCAACACAACTCAACCCCTCCTCTCCTTTCTCGTGTCTGACACCATCCTCATCTCACAA
TCCCACTCCACTTTCTCAGACTGTCTTAACAGCAGAAGCCACTGCAAACCACATCACTTC
AGAAAATTCACCTACAAATATCCTTTTCCAAAAATCCTCTGAGTCAAACGAGGCAGATCC
AAATGAACACCTGAGCTCTGTTGAGAGAATAATACAAGAAATTATGAGTTCATCACAGTT
TAACAGTGCAGGTAGCATGATCAGTGTAGGTTCCGTTGGAAACAATGTGAAAAATGGTAG
TGGGATGACACAAATAAACCACAGTTCTATTGGTGGTGGTGACAGCACAATGGGAAGCAG
GATAAATAGCAATTCAAGTGTTGGGGCTGCAGGATTTGGAAACTTTGATGGTGGAATTGG
TGTCTCTGCCACAGTTAATAGAATCAGAGCAACCATGGGGAATAACTCTATGACCTCAAG
TGTTGAGGTAGGCATGCCATCGATGCCTCAGGATGTTACTATGAACAATAAGCAACAGGA
TATGAAATCTCTCAATGGGGTTGGAGGAGGATTAAATGATTTCAATAATCTCCGGTTCAA
CTAGAAATCATCTCCTTAAGGGATTTTTTAGTCTTCTGATCTGTTTGTTTCTCAATAATG
AAAGTAACCTGCTCCTACTAATCTGATAAGTTTCTGATGTTGATGAAAGGTGCTCGTCCA
TGGTGCATTGGTGACTGCTTCGACAACATGTGAGTTTGTAAGCTGTGATCCATAGTGACA
GGGGCTTTTTCTCGGGCATGGTACTAATTTCATAGGAAAATGACACACATAGTCTGGCAA
TTTCCGTTTCAAACTTGATCCTCTTTCAGTTTCTCCTTCTATGCTCAGTTTAGTACCTCG
TTTGTGGGGTTTCCTTTCATAATTAGTTGGTGTCTTAAGGTTTCACATAGCAGCTTCTCT
CATTGTTTCATAATGGAAGTTCAACTAGAGGGACTACAGTTTTAGGAAGTTTTGAGGTTT
CTTTGGTCCTTGTTGACTATGGTATAATAACTCTGCTGAGGTATAAATTCCATGGACTAT
GTTTGTGTTTCATTTTAGTGAGGAAATCATAATGGAGGTCAGGCATTTGTTACATA