Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0044g01090.t01
CDS Infomation

cds chromosome:12X:4:22411363:22436682:-1 gene:VIT_04s0044g01090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGGGTGGAACAGTTCAGATCAATTGGCACGACACAAAGCCAATCCTAACCCTAGAT
TTTCATCCCCTTTCTGGAACTCTCGCTACCGGCGGTGCTGATTACGACATCAAGCTATGG
CTGATAAATTCAGGGGAAGTGCAAAAGGAAGTTCCAACTGTTTCCTACCAAACTAGCCTT
TCTTACCATGGTTCTGCAGTAAATATTCTTCGCTTCTCTCCAACTGGAGAACAACTTGCC
TCTGGTGCTGATGGAGGTGAGCTGATCATCTGGAAGTTACACTCTACAGATACTGGTCCA
AGTTGGAAAGTCCTCAAGACATTGTCATTTCACCGCAAGGATGTCCTGGACCTGCAGTGG
TCTACCGATGGTGCATTTCTCATTTCTGGATCTGTTGATAATTCTTGCATAATATGGGAT
GTTAATAAAGGTTCTGTTCATCAGATTTTGGATGCCCATTTGCATTATGTTCAGGGTGTG
GCATGGGATCCACAGTCCAAGTATGTTGCATCTCTTAGTTCAGATAGATCCTGCAGGATT
TATGTCAATAAGCCTCAAAATAAAACCAAAGGGATAGAAAAAATGAACTATGTTTGTCAG
CATGTCATCACAAAATCAGAACAGCAAATGACAGATGATTCCAAGTCTGTAAAAAGTCAT
CTATTTCATGATGAGACATTGCCGTCTTTCTTCCGAAGATTAAAGTGGTCACCTGATGGA
TCATTTTTGCTTGTACCTGCAGGTTCGTACAAATTCTCACCTGCATCAGGACCAGTAAAC
ACTGCTTATGTGTTTTCTAGAAAAGATCTTTCAAGACCTGCTTTACAGCTCCCTGGTTCT
AGCAAACCTGTCATAGCTGTCCGCTTCTGTCCTATGGCTTTTCACCTTCAGGGATCAAAC
TCAGCTGGGTTCTTCAAGCTTCCTTATCGCCTAATATTTGCGGTGGCCAGTCTTAACTCT
TTATATATCTACGACACAGAAAGCATTCCACCAATAGCAATCTTGGCTGGTCTTCACTAT
GCAGCCATTACGGACATTGCATGGTCGCATGATGGCAAATATTTAGCTATATCCTCCCAA
GACGGTTACAGTACCCTTGTAGAATTTGAAAATGGTGAACTTGGGTCCCCCTTCCTTTTA
TCAGAAGTCGAGAGTGTCTCGGGTGATGAGAAGAAGAGCCCTGTCCAGCAGCCCAAGGCC
ATGGAGGTTGAAGAAACTACACAAGTTGTTACTGTTTCAGTAGATAGCAGAAAAAGAGAA
GTAGGAAGGAATGATCTCAAAGAGGCATCGCCAAATGCAACAAGTAGTTCCACTTCTACC
CCCAAGCCTGCAAAGAGGAGAATCACCCCGGTGTCAATCGAGCCATCATAA

Peptide Sequence

PEP ID

VIT_04s0044g01090.t01
PEP Infomation

pep chromosome:12X:4:22411363:22436682:-1 gene:VIT_04s0044g01090 transcript:VIT_04s0044g01090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRGGTVQINWHDTKPILTLDFHPLSGTLATGGADYDIKLWLINSGEVQKEVPTVSYQTSL
SYHGSAVNILRFSPTGEQLASGADGGELIIWKLHSTDTGPSWKVLKTLSFHRKDVLDLQW
STDGAFLISGSVDNSCIIWDVNKGSVHQILDAHLHYVQGVAWDPQSKYVASLSSDRSCRI
YVNKPQNKTKGIEKMNYVCQHVITKSEQQMTDDSKSVKSHLFHDETLPSFFRRLKWSPDG
SFLLVPAGSYKFSPASGPVNTAYVFSRKDLSRPALQLPGSSKPVIAVRFCPMAFHLQGSN
SAGFFKLPYRLIFAVASLNSLYIYDTESIPPIAILAGLHYAAITDIAWSHDGKYLAISSQ
DGYSTLVEFENGELGSPFLLSEVESVSGDEKKSPVQQPKAMEVEETTQVVTVSVDSRKRE
VGRNDLKEASPNATSSSTSTPKPAKRRITPVSIEPS

Transcript Sequence

Transcript ID

VIT_04s0044g01090.t01
Transcript Infomation

cdna chromosome:12X:4:22411363:22436682:-1 gene:VIT_04s0044g01090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAGATAATGAGGGGTGGAACAGTTCAGATCAATTGGCACGACACAAAGCCAATCCTAAC
CCTAGATTTTCATCCCCTTTCTGGAACTCTCGCTACCGGCGGTGCTGATTACGACATCAA
GCTATGGCTGATAAATTCAGGGGAAGTGCAAAAGGAAGTTCCAACTGTTTCCTACCAAAC
TAGCCTTTCTTACCATGGTTCTGCAGTAAATATTCTTCGCTTCTCTCCAACTGGAGAACA
ACTTGCCTCTGGTGCTGATGGAGGTGAGCTGATCATCTGGAAGTTACACTCTACAGATAC
TGGTCCAAGTTGGAAAGTCCTCAAGACATTGTCATTTCACCGCAAGGATGTCCTGGACCT
GCAGTGGTCTACCGATGGTGCATTTCTCATTTCTGGATCTGTTGATAATTCTTGCATAAT
ATGGGATGTTAATAAAGGTTCTGTTCATCAGATTTTGGATGCCCATTTGCATTATGTTCA
GGGTGTGGCATGGGATCCACAGTCCAAGTATGTTGCATCTCTTAGTTCAGATAGATCCTG
CAGGATTTATGTCAATAAGCCTCAAAATAAAACCAAAGGGATAGAAAAAATGAACTATGT
TTGTCAGCATGTCATCACAAAATCAGAACAGCAAATGACAGATGATTCCAAGTCTGTAAA
AAGTCATCTATTTCATGATGAGACATTGCCGTCTTTCTTCCGAAGATTAAAGTGGTCACC
TGATGGATCATTTTTGCTTGTACCTGCAGGTTCGTACAAATTCTCACCTGCATCAGGACC
AGTAAACACTGCTTATGTGTTTTCTAGAAAAGATCTTTCAAGACCTGCTTTACAGCTCCC
TGGTTCTAGCAAACCTGTCATAGCTGTCCGCTTCTGTCCTATGGCTTTTCACCTTCAGGG
ATCAAACTCAGCTGGGTTCTTCAAGCTTCCTTATCGCCTAATATTTGCGGTGGCCAGTCT
TAACTCTTTATATATCTACGACACAGAAAGCATTCCACCAATAGCAATCTTGGCTGGTCT
TCACTATGCAGCCATTACGGACATTGCATGGTCGCATGATGGCAAATATTTAGCTATATC
CTCCCAAGACGGTTACAGTACCCTTGTAGAATTTGAAAATGGTGAACTTGGGTCCCCCTT
CCTTTTATCAGAAGTCGAGAGTGTCTCGGGTGATGAGAAGAAGAGCCCTGTCCAGCAGCC
CAAGGCCATGGAGGTTGAAGAAACTACACAAGTTGTTACTGTTTCAGTAGATAGCAGAAA
AAGAGAAGTAGGAAGGAATGATCTCAAAGAGGCATCGCCAAATGCAACAAGTAGTTCCAC
TTCTACCCCCAAGCCTGCAAAGAGGAGAATCACCCCGGTGTCAATCGAGCCATCATAATT
CTCATCCTACCCTCTGTACACTGTGCATTAGGAAATGGAATCAACGTTGGGAAGGCTCCG
GCACTTGAATTGAAAAACAAATCCCCTACTATCGGGGGGGAATATGGAGCAAGTTTTGAT
GTTGTATGGGCTCGTTGCCATTTTGACGCACCACACAAAAATCTTACTTAGCTCAAGAAC
TCGAATGTATTGGTATATTTGTTCACAAATTAACATCAAAGAAAAGTTTAATACAAAAAA
TTCTGCAGGCGTGATGACTATGCTAT