Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0044g00870.t01
CDS Infomation

cds chromosome:12X:4:22059413:22060988:1 gene:VIT_04s0044g00870 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6I0G9]
Sequence

ATGGTGAGGGATAACTTGTTTATTACAGTTCCCAGCCTTTTCCGTTGCCCGATATCTCTG
GACGTCATGAAGTCCCCGGTGAGTCTCTGCACCGGCGTCACCTATGACCGCTCGAGCATT
CAGAGGTGGCTCGACAACGGCAACAACACTTGTCCGGCCACTATGCAGGTGCTCCACAGT
AAGGACTTTGTGCCCAACCACACCCTACAACGCCTCATCCAGATCTGGTCCAACTCGGTC
CGCCACCGCTCCAACTCGCCCGACTCCCCCATCCAGCTCGTTCCCTCTCTGTCCCCAGAC
CAAGCGAGGGACCTGATTAAAGAAATCGAGAGCAAGCCAGAGGACTGTCTCGAATGTATG
TCGAAGATTATTTGTTTCGCGAGAGAGTCCGAGGAAAGCCGCAAGTTTCTTGCGAGAATT
GATGGATTCGTCTCGTTGCTGGTTGATTTTCTCGGCAGCGGCAATGCTAATTTCCTTGCG
CTTGAACAAGTGGTGAGGGTTTTGGACATGATTATAAGTGAGCACGAAGATCATAAGCAG
CTGGCGAATTCGATGCTGAAGAGTGATCGCGATTGCTTGTCTTCAATCCTCCTCGTTTTG
CAACAAGGAAGCGCGGAATCTAGAATCGCATCTGCTAGGGTTTTGGAGTCGATCGCAATC
GATGCTGAATCGAAGCTCTTGATAGCCGAAAAGGATGGATTATTTTCTGAATTGATTCGC
ATAATGAGCACCGAGACCGATCCTACAATGATAGAATCAACCTTGTCTTGCTTGATCGCA
GTATCAATGCCGAGACGCATCCGACCAAAAATCGTGAGACTCGGCGTCGTCAAGCAACTC
ACGAAATTATTATCCGATCCCAACTGGAGCGTTTCGGTGACCGAGAAGGCTCTGAAACTG
CTGGAAATGGCATCATCGTGCAAAGAGGGAAAATCCGAGATATGTGAGAACTCCGACTGC
GTATCTGCCATAGTGCAGAAGATGTTGAAGGTGTCGAGCACGGCGACGGAGCACGCCGTG
ACGATACTGTGGAGCGTGTGCTATTTGTCAAGAGACGACAGGGCTCAGAGCACGGTCACC
CAGAACAACGGATTGACCAAGATTTTGGTGCTTATGCAGAGCAATTGCTCGCCGGCGGTG
AGGCAACTAGCCGGAGATTTGTTGAAAATATTCAGAGTGAGCTCCAAATCGTGTCTGTCA
AGCTATGATACCAAAACAACCCATATCATGCCTTTTTGA

Peptide Sequence

PEP ID

VIT_04s0044g00870.t01
PEP Infomation

pep chromosome:12X:4:22059413:22060988:1 gene:VIT_04s0044g00870 transcript:VIT_04s0044g00870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6I0G9]
Sequence

MVRDNLFITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHS
KDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLECM
SKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHKQ
LANSMLKSDRDCLSSILLVLQQGSAESRIASARVLESIAIDAESKLLIAEKDGLFSELIR
IMSTETDPTMIESTLSCLIAVSMPRRIRPKIVRLGVVKQLTKLLSDPNWSVSVTEKALKL
LEMASSCKEGKSEICENSDCVSAIVQKMLKVSSTATEHAVTILWSVCYLSRDDRAQSTVT
QNNGLTKILVLMQSNCSPAVRQLAGDLLKIFRVSSKSCLSSYDTKTTHIMPF

Transcript Sequence

Transcript ID

VIT_04s0044g00870.t01
Transcript Infomation

cdna chromosome:12X:4:22059413:22060988:1 gene:VIT_04s0044g00870 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6I0G9]
Sequence

TTTCTCTCTCTTCTTAAATCCTCCCTTCGCTGCCCTTTTTTTCTGTTCTTCTTCGTCTTC
TTCAGCAGCTCTACTGCTCTTCCAGCAAAATAATTCTGTGCTTTCGCAGAAGTTGAAGAT
GGTGAGGGATAACTTGTTTATTACAGTTCCCAGCCTTTTCCGTTGCCCGATATCTCTGGA
CGTCATGAAGTCCCCGGTGAGTCTCTGCACCGGCGTCACCTATGACCGCTCGAGCATTCA
GAGGTGGCTCGACAACGGCAACAACACTTGTCCGGCCACTATGCAGGTGCTCCACAGTAA
GGACTTTGTGCCCAACCACACCCTACAACGCCTCATCCAGATCTGGTCCAACTCGGTCCG
CCACCGCTCCAACTCGCCCGACTCCCCCATCCAGCTCGTTCCCTCTCTGTCCCCAGACCA
AGCGAGGGACCTGATTAAAGAAATCGAGAGCAAGCCAGAGGACTGTCTCGAATGTATGTC
GAAGATTATTTGTTTCGCGAGAGAGTCCGAGGAAAGCCGCAAGTTTCTTGCGAGAATTGA
TGGATTCGTCTCGTTGCTGGTTGATTTTCTCGGCAGCGGCAATGCTAATTTCCTTGCGCT
TGAACAAGTGGTGAGGGTTTTGGACATGATTATAAGTGAGCACGAAGATCATAAGCAGCT
GGCGAATTCGATGCTGAAGAGTGATCGCGATTGCTTGTCTTCAATCCTCCTCGTTTTGCA
ACAAGGAAGCGCGGAATCTAGAATCGCATCTGCTAGGGTTTTGGAGTCGATCGCAATCGA
TGCTGAATCGAAGCTCTTGATAGCCGAAAAGGATGGATTATTTTCTGAATTGATTCGCAT
AATGAGCACCGAGACCGATCCTACAATGATAGAATCAACCTTGTCTTGCTTGATCGCAGT
ATCAATGCCGAGACGCATCCGACCAAAAATCGTGAGACTCGGCGTCGTCAAGCAACTCAC
GAAATTATTATCCGATCCCAACTGGAGCGTTTCGGTGACCGAGAAGGCTCTGAAACTGCT
GGAAATGGCATCATCGTGCAAAGAGGGAAAATCCGAGATATGTGAGAACTCCGACTGCGT
ATCTGCCATAGTGCAGAAGATGTTGAAGGTGTCGAGCACGGCGACGGAGCACGCCGTGAC
GATACTGTGGAGCGTGTGCTATTTGTCAAGAGACGACAGGGCTCAGAGCACGGTCACCCA
GAACAACGGATTGACCAAGATTTTGGTGCTTATGCAGAGCAATTGCTCGCCGGCGGTGAG
GCAACTAGCCGGAGATTTGTTGAAAATATTCAGAGTGAGCTCCAAATCGTGTCTGTCAAG
CTATGATACCAAAACAACCCATATCATGCCTTTTTGACTCATCTATCACTGATTTTCTTC
CTCTCTTTCTATATTGAATGAGACGGAGACGGAGACGGAGACGGAGATGGGGATGGGGAT
GGAGAGAGAGACAAGTTTGTATATGCAAAGACAAATTTTGTTAACCAATAGAAGAAAGAA
TTCATTTGATTTTGTTTACATGTCTGTTTCTTCCATTTCAGTTTCTTGCCTTTTTGTTAG
GCACATGGGAAAAAAT