Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0044g00250.t01
CDS Infomation

cds chromosome:12X:4:20937375:20940114:1 gene:VIT_04s0044g00250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:F6I0J6]
Sequence

ATGGCGGCTCTCTCGAGCTTCTTCAAGAGAAAATCGTCGATACCCCTTACCAGATGGTTC
TCCACTCAACCTATCCTCGAGTCTCCGTCTTTTTCCCGGAGAATCAGAGATCTGCCCAAG
GATCTTCCAGGGACCAACATAAAAAAAGAAGTTTCTCAGCTTATTGGGAAGACTCCTCTG
GTTTTTCTGAACAAAGTCACAGAAGGGTGTGGAGCTTATGTAGCTGTCAAGCAAGAGATG
ATGCAACCCACTGCTAGCATCAAAGACAGGCCAGCACTAGCCATGATGACAGACGCAGAA
AACAAACATTTGATCACTCCGGGGAAGACTGTGCTGATTGAGCCCACATCGGGAAATATG
GGGATTAGCATGGCGTTTATGGCAGCCATGAAAGGGTACAAGATGGTTCTGACCATGCCT
TCCTACACAAGCTTGGAGAGGAGAGTGACCATGAGAGCATTTGGGGCTGATTTGATTCTC
ACCGATCCCACCAAGGGGATGGGAGGAACAGTCAAAAAGGCTTATGAGCTTTTGGAATCC
ACCCCAGATGCTTTCATGCTTCAACAATTTTCAAATCCTGCCAATACCCAGGTCCAGAGA
TATGGGAGGATACTAATGGACAAGTTGACATTTATAATGGGAATTGGCAGCGGTGGCACT
GTCTCTGGGGTCGGACGTTATCTCAAATCCCAGAATCCTAATGTTAAGATATATGGACTT
GAGCCAACTGAAAGCAACGTACTGAATGGTGGTAAGCCAGGTCCTCATCATATTACGGGC
AATGGGGTTGGATTCAAACCCGATATCCTGGACATGGATGTAATGGAAGAAGTTCTCATG
GTTTCTAGTGAAGATGCAGTCAACATGGCCAGGCAGTTGGCACTGAAGGAAGGGCTCATG
GTGGGGATATCATCAGGAGCTAATACAGTTGCAGCGCTAAGGCTAGCAAGAATGCCAGAG
AACAGAGGCAAACTGATAGTGACTGTTCATCCAAGTTTTGGGGAGCGGTACTTGTCATCT
GTCCTGTTTCAAGAACTGAGGAAAGAAGCTGAAAACATGCAACCTGTTTCTGTTGATTGA

Peptide Sequence

PEP ID

VIT_04s0044g00250.t01
PEP Infomation

pep chromosome:12X:4:20937375:20940114:1 gene:VIT_04s0044g00250 transcript:VIT_04s0044g00250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:F6I0J6]
Sequence

MAALSSFFKRKSSIPLTRWFSTQPILESPSFSRRIRDLPKDLPGTNIKKEVSQLIGKTPL
VFLNKVTEGCGAYVAVKQEMMQPTASIKDRPALAMMTDAENKHLITPGKTVLIEPTSGNM
GISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPTKGMGGTVKKAYELLES
TPDAFMLQQFSNPANTQVQRYGRILMDKLTFIMGIGSGGTVSGVGRYLKSQNPNVKIYGL
EPTESNVLNGGKPGPHHITGNGVGFKPDILDMDVMEEVLMVSSEDAVNMARQLALKEGLM
VGISSGANTVAALRLARMPENRGKLIVTVHPSFGERYLSSVLFQELRKEAENMQPVSVD

Transcript Sequence

Transcript ID

VIT_04s0044g00250.t01
Transcript Infomation

cdna chromosome:12X:4:20937375:20940114:1 gene:VIT_04s0044g00250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:F6I0J6]
Sequence

TTTGAGTTACAGTGAAGAAACTCTTCACATCAATGGCGGCTCTCTCGAGCTTCTTCAAGA
GAAAATCGTCGATACCCCTTACCAGATGGTTCTCCACTCAACCTATCCTCGAGTCTCCGT
CTTTTTCCCGGAGAATCAGAGATCTGCCCAAGGATCTTCCAGGGACCAACATAAAAAAAG
AAGTTTCTCAGCTTATTGGGAAGACTCCTCTGGTTTTTCTGAACAAAGTCACAGAAGGGT
GTGGAGCTTATGTAGCTGTCAAGCAAGAGATGATGCAACCCACTGCTAGCATCAAAGACA
GGCCAGCACTAGCCATGATGACAGACGCAGAAAACAAACATTTGATCACTCCGGGGAAGA
CTGTGCTGATTGAGCCCACATCGGGAAATATGGGGATTAGCATGGCGTTTATGGCAGCCA
TGAAAGGGTACAAGATGGTTCTGACCATGCCTTCCTACACAAGCTTGGAGAGGAGAGTGA
CCATGAGAGCATTTGGGGCTGATTTGATTCTCACCGATCCCACCAAGGGGATGGGAGGAA
CAGTCAAAAAGGCTTATGAGCTTTTGGAATCCACCCCAGATGCTTTCATGCTTCAACAAT
TTTCAAATCCTGCCAATACCCAGGTCCAGAGATATGGGAGGATACTAATGGACAAGTTGA
CATTTATAATGGGAATTGGCAGCGGTGGCACTGTCTCTGGGGTCGGACGTTATCTCAAAT
CCCAGAATCCTAATGTTAAGATATATGGACTTGAGCCAACTGAAAGCAACGTACTGAATG
GTGGTAAGCCAGGTCCTCATCATATTACGGGCAATGGGGTTGGATTCAAACCCGATATCC
TGGACATGGATGTAATGGAAGAAGTTCTCATGGTTTCTAGTGAAGATGCAGTCAACATGG
CCAGGCAGTTGGCACTGAAGGAAGGGCTCATGGTGGGGATATCATCAGGAGCTAATACAG
TTGCAGCGCTAAGGCTAGCAAGAATGCCAGAGAACAGAGGCAAACTGATAGTGACTGTTC
ATCCAAGTTTTGGGGAGCGGTACTTGTCATCTGTCCTGTTTCAAGAACTGAGGAAAGAAG
CTGAAAACATGCAACCTGTTTCTGTTGATTGATGCTTCTATATACCCTCCTACCTATTGC
TTATGGAGTATTATTACCAGTGATTTTGCCACGTGAAGTC