Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0044g00020.t01
CDS Infomation

cds chromosome:12X:4:20659987:20665809:1 gene:VIT_04s0044g00020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Catalase [Source:UniProtKB/TrEMBL;Acc:F6I0K4]
Sequence

ATGGATCCTTACAAGTATCGTCCTTCAAGCGCCTATAATTCTCCTTACTTCACCACAAAT
GCTGGTGCGCCTGTTTACAACAATGACTCGTCGCTCACCGTTGGATCAAGAGGACCAGTT
CTTCTTGAGGATTATCATTTGGTGGAGAAGCTTGCAAATTTTCAAAGAGAACGCATTCCA
GAACGTGTGGTCCATGCTAGAGGAGCTAGTGCTAAAGGGTTTTTTGAGGTCACTCACGAT
GTCTCTGACCTCACATGTGCTGATTTCCTTCGTGCCCCTGGAGTGCAGACTCCAGTTATT
GTTAGGTTTTCCACTGTTATCCACGAGCGTGGCAGCCCTGAGACCATAAGGGACCCTCGA
GGTTTTGCTGTGAAGTTCTATACTAGAGAGGGCAATTTTGATATGGTGGGAAACAATTTC
CCAGTCTTCTTTATTCGTGATGCAATGAAGTTCCCTGATGTGATCCATGCTTTTAAACCC
AATCCGAAGTCCCATATCCAGGAGTATTGGAGAGTTGTTGACTTCTTGTCCTACCATCCA
GAAAGCTTGAGCACATTTGCCTTCCTCTTCGATGATGTGGGTGTCCCACAGGACTATAGG
CACATGGAAGGCTTTGGTGTTCACACCTTCACTCTAATCAACAAGGCTGGGAAGGCAAAT
TATGTGAAGTTCCACTGGAAACCCACGTGTGGAGTCAAGTGTTTGTTGGAGGATGAAGCC
ATAAGAGTAGGAGGAACTAACCACAGTCATGCTACTCAGGATCTCTATGACTCGATCAAG
GCTGGAAACTATCCTGAGTGGAAGCTTTTCATCCAGACGATGGATCCTGAACATGAAGAC
AAGTTTGACTTTGATCCACTTGATGTTACCAAGACTTGGCCTGAGGATATCTTGCCCTTG
CAGCCAGTGGGCCGGTTGGTATTAAACAAGAATATAGATAATTTCTTTGCTGAGAATGAG
ATGCTTGCCTTCAACCCAGCTCTTGTTGTACCTGGTATATATTACACAAATGATAAAATG
CTCCAAGGTAGAATCTTTGCCTATTCTGATACTCAGAGGCACCGCCTTGGACCGAACTAT
CTGCAGCTTCCAGTAAATGCACCCAAGTGTGCTTTTCACAACAATCACCATGACGGTTCC
ATGAATTTCATGCACAGGGATGAGGAGGTCGACTACTTCCCTTCAAGGTTTGATCCTGTT
CGTCATGCGGAGACATTCCCTATTCCTTCTACTATTTGCCATGGCAAGCGTGAGAAGGTC
GTCATTGAGAAGGAGAACAATTTCAAGCAGCCTGGTGAGAGATACCGTTCATTTGCACCG
GACAGGCAAGAGCGTTTCATCAACAGATGGGTTGAGACCTTGTCTGATCCAAGGGTCACC
TATGAGATCCGCAGTATCTGGATTTCATATTGGTCTCAGGCTGACAGGTCTCTGGGTCAG
AAGCTTGCTTCTCGTCTTAATGTCAAGCCTAAGTATTGA

Peptide Sequence

PEP ID

VIT_04s0044g00020.t01
PEP Infomation

pep chromosome:12X:4:20659987:20665809:1 gene:VIT_04s0044g00020 transcript:VIT_04s0044g00020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Catalase [Source:UniProtKB/TrEMBL;Acc:F6I0K4]
Sequence

MDPYKYRPSSAYNSPYFTTNAGAPVYNNDSSLTVGSRGPVLLEDYHLVEKLANFQRERIP
ERVVHARGASAKGFFEVTHDVSDLTCADFLRAPGVQTPVIVRFSTVIHERGSPETIRDPR
GFAVKFYTREGNFDMVGNNFPVFFIRDAMKFPDVIHAFKPNPKSHIQEYWRVVDFLSYHP
ESLSTFAFLFDDVGVPQDYRHMEGFGVHTFTLINKAGKANYVKFHWKPTCGVKCLLEDEA
IRVGGTNHSHATQDLYDSIKAGNYPEWKLFIQTMDPEHEDKFDFDPLDVTKTWPEDILPL
QPVGRLVLNKNIDNFFAENEMLAFNPALVVPGIYYTNDKMLQGRIFAYSDTQRHRLGPNY
LQLPVNAPKCAFHNNHHDGSMNFMHRDEEVDYFPSRFDPVRHAETFPIPSTICHGKREKV
VIEKENNFKQPGERYRSFAPDRQERFINRWVETLSDPRVTYEIRSIWISYWSQADRSLGQ
KLASRLNVKPKY

Transcript Sequence

Transcript ID

VIT_04s0044g00020.t01
Transcript Infomation

cdna chromosome:12X:4:20659987:20665809:1 gene:VIT_04s0044g00020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Catalase [Source:UniProtKB/TrEMBL;Acc:F6I0K4]
Sequence

TCCGATTTTCAGAGACCCTGCCTCATCAACGCAGCTGATCACAATGGATCCTTACAAGTA
TCGTCCTTCAAGCGCCTATAATTCTCCTTACTTCACCACAAATGCTGGTGCGCCTGTTTA
CAACAATGACTCGTCGCTCACCGTTGGATCAAGAGGACCAGTTCTTCTTGAGGATTATCA
TTTGGTGGAGAAGCTTGCAAATTTTCAAAGAGAACGCATTCCAGAACGTGTGGTCCATGC
TAGAGGAGCTAGTGCTAAAGGGTTTTTTGAGGTCACTCACGATGTCTCTGACCTCACATG
TGCTGATTTCCTTCGTGCCCCTGGAGTGCAGACTCCAGTTATTGTTAGGTTTTCCACTGT
TATCCACGAGCGTGGCAGCCCTGAGACCATAAGGGACCCTCGAGGTTTTGCTGTGAAGTT
CTATACTAGAGAGGGCAATTTTGATATGGTGGGAAACAATTTCCCAGTCTTCTTTATTCG
TGATGCAATGAAGTTCCCTGATGTGATCCATGCTTTTAAACCCAATCCGAAGTCCCATAT
CCAGGAGTATTGGAGAGTTGTTGACTTCTTGTCCTACCATCCAGAAAGCTTGAGCACATT
TGCCTTCCTCTTCGATGATGTGGGTGTCCCACAGGACTATAGGCACATGGAAGGCTTTGG
TGTTCACACCTTCACTCTAATCAACAAGGCTGGGAAGGCAAATTATGTGAAGTTCCACTG
GAAACCCACGTGTGGAGTCAAGTGTTTGTTGGAGGATGAAGCCATAAGAGTAGGAGGAAC
TAACCACAGTCATGCTACTCAGGATCTCTATGACTCGATCAAGGCTGGAAACTATCCTGA
GTGGAAGCTTTTCATCCAGACGATGGATCCTGAACATGAAGACAAGTTTGACTTTGATCC
ACTTGATGTTACCAAGACTTGGCCTGAGGATATCTTGCCCTTGCAGCCAGTGGGCCGGTT
GGTATTAAACAAGAATATAGATAATTTCTTTGCTGAGAATGAGATGCTTGCCTTCAACCC
AGCTCTTGTTGTACCTGGTATATATTACACAAATGATAAAATGCTCCAAGGTAGAATCTT
TGCCTATTCTGATACTCAGAGGCACCGCCTTGGACCGAACTATCTGCAGCTTCCAGTAAA
TGCACCCAAGTGTGCTTTTCACAACAATCACCATGACGGTTCCATGAATTTCATGCACAG
GGATGAGGAGGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATT
CCCTATTCCTTCTACTATTTGCCATGGCAAGCGTGAGAAGGTCGTCATTGAGAAGGAGAA
CAATTTCAAGCAGCCTGGTGAGAGATACCGTTCATTTGCACCGGACAGGCAAGAGCGTTT
CATCAACAGATGGGTTGAGACCTTGTCTGATCCAAGGGTCACCTATGAGATCCGCAGTAT
CTGGATTTCATATTGGTCTCAGGCTGACAGGTCTCTGGGTCAGAAGCTTGCTTCTCGTCT
TAATGTCAAGCCTAAGTATTGAAGGCGAAACCTTGAGAAGAAGCTGCAGCAAGCAAGGGT
GTTCATCAGTCAAAATATGACGTTAGTTTCTTTGTACTATAAAATAATGTGCGAGTCAAG
AAATCTGAAGGTCCTCTATAATAAGTGTAATATTTTGACTGATGTCTAAGTATGACGTGT
TGTAAAATAATGTACGAGCCAGACAAATCCTACGGTTGAAGGCGCTGTACAATATGTGTA
ATGGCATGCAATTTTATTTGTCA