Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g03810.t01
CDS Infomation

cds chromosome:12X:4:20315432:20318717:1 gene:VIT_04s0023g03810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGTGCAGCAAGTTATCTGCATGAAAGGAGGTGTCGGAGAGGGAAGCTATGCCCGT
AACTCCAAATCACAGGCTGCATTACTATCCAAGTCCATGCCCCTGCTGGAGCAAGCAGTG
CTAGATTTATGTTGCACCACCTTACCTGAGAGTGTCGCCATAGCAGACCTTGGCTGTTCA
TCGGGCCCAAATACTTTTTTCGCGGTCTCCGAAATCATGACCATCATCTACAGGAGGTGT
CGCCAACTAGGCCGGTCACCACCAGGTTTTTGGGTGTTCTTGAATGATCTTCCAGGGAAT
GACTTCAATGCTGTGTTCAAGTCATTGCCAACATTCCATGAAAAGATGAAGGAAGAAAAT
GGACAGGAGTTTGGGCCATGTCATGTTGCTGCTGTTCCGGGTTCTTTCTACCACAAGCTT
TTTCCATCCAGGAGACTACACTTTGTGCACTCTTCTTGCAGTCTCCATTGGCTGTCCCAG
GTTCCTCCAGAGCTTCTTAACAAGCAAATTACAAACAAGGGGAAGATTTATCTTTCAAAA
ACAAGCTCACCGGCCCTCATAGATGCTTACGCATCTCAGTTCCAGAGGGATTTCTCTTTG
TTTCTTAAGTTGAGATCAGAAGAAACAGTCCCCGGAGGACGCATGGTTTTGTCGCTCATG
GCCAGACGAACCCCAGACCCTGTCTCAGATGAGAGTTGTCTGTTGTGGGATCTATTAGCA
CAGGCGTTGCAGGGGTTGGTTTCAGAGGGGCTTATTGCAGAGGAGAAATTAGATTCCTAC
AATGCACCATACTATCAACCTTACACAGAGGACCTAGAAACTGGGATAGAGAATGATGGA
TCCTTTAGCATCAACGGCCTTGAGATCATGGTCTTACCATGGGACAGTGCCAGTGGTGGA
CAAAATTATGATAGGCCAACAACCGCCCAGAAGATTGCAAAGTCGATGAAAGCAGTGCAA
GAGCCGATGTTGGCAAGTCATTTCGGGGCAGAAATCATGGACCCTTTGTTTAAAAGGCTC
ATGGAGATCATTGCAGCAGATACAAGGGAGGTGGAGCATGTTTCTGTCCTTGTTTCCATG
ACCAGAAAGGCTTGA

Peptide Sequence

PEP ID

VIT_04s0023g03810.t01
PEP Infomation

pep chromosome:12X:4:20315432:20318717:1 gene:VIT_04s0023g03810 transcript:VIT_04s0023g03810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGVQQVICMKGGVGEGSYARNSKSQAALLSKSMPLLEQAVLDLCCTTLPESVAIADLGCS
SGPNTFFAVSEIMTIIYRRCRQLGRSPPGFWVFLNDLPGNDFNAVFKSLPTFHEKMKEEN
GQEFGPCHVAAVPGSFYHKLFPSRRLHFVHSSCSLHWLSQVPPELLNKQITNKGKIYLSK
TSSPALIDAYASQFQRDFSLFLKLRSEETVPGGRMVLSLMARRTPDPVSDESCLLWDLLA
QALQGLVSEGLIAEEKLDSYNAPYYQPYTEDLETGIENDGSFSINGLEIMVLPWDSASGG
QNYDRPTTAQKIAKSMKAVQEPMLASHFGAEIMDPLFKRLMEIIAADTREVEHVSVLVSM
TRKA

Transcript Sequence

Transcript ID

VIT_04s0023g03810.t01
Transcript Infomation

cdna chromosome:12X:4:20315432:20318717:1 gene:VIT_04s0023g03810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGGTGAGAGAGTTCAGAGGAGAGATCAGAGATGAAGAAGAAGGAGAGCATGGGAGTGCA
GCAAGTTATCTGCATGAAAGGAGGTGTCGGAGAGGGAAGCTATGCCCGTAACTCCAAATC
ACAGGCTGCATTACTATCCAAGTCCATGCCCCTGCTGGAGCAAGCAGTGCTAGATTTATG
TTGCACCACCTTACCTGAGAGTGTCGCCATAGCAGACCTTGGCTGTTCATCGGGCCCAAA
TACTTTTTTCGCGGTCTCCGAAATCATGACCATCATCTACAGGAGGTGTCGCCAACTAGG
CCGGTCACCACCAGGTTTTTGGGTGTTCTTGAATGATCTTCCAGGGAATGACTTCAATGC
TGTGTTCAAGTCATTGCCAACATTCCATGAAAAGATGAAGGAAGAAAATGGACAGGAGTT
TGGGCCATGTCATGTTGCTGCTGTTCCGGGTTCTTTCTACCACAAGCTTTTTCCATCCAG
GAGACTACACTTTGTGCACTCTTCTTGCAGTCTCCATTGGCTGTCCCAGGTTCCTCCAGA
GCTTCTTAACAAGCAAATTACAAACAAGGGGAAGATTTATCTTTCAAAAACAAGCTCACC
GGCCCTCATAGATGCTTACGCATCTCAGTTCCAGAGGGATTTCTCTTTGTTTCTTAAGTT
GAGATCAGAAGAAACAGTCCCCGGAGGACGCATGGTTTTGTCGCTCATGGCCAGACGAAC
CCCAGACCCTGTCTCAGATGAGAGTTGTCTGTTGTGGGATCTATTAGCACAGGCGTTGCA
GGGGTTGGTTTCAGAGGGGCTTATTGCAGAGGAGAAATTAGATTCCTACAATGCACCATA
CTATCAACCTTACACAGAGGACCTAGAAACTGGGATAGAGAATGATGGATCCTTTAGCAT
CAACGGCCTTGAGATCATGGTCTTACCATGGGACAGTGCCAGTGGTGGACAAAATTATGA
TAGGCCAACAACCGCCCAGAAGATTGCAAAGTCGATGAAAGCAGTGCAAGAGCCGATGTT
GGCAAGTCATTTCGGGGCAGAAATCATGGACCCTTTGTTTAAAAGGCTCATGGAGATCAT
TGCAGCAGATACAAGGGAGGTGGAGCATGTTTCTGTCCTTGTTTCCATGACCAGAAAGGC
TTGATATCACTCTCAAGTCTCAATCTTCCATGACTTGTCATACTGCACTTGCCTCTCAGA
CACTTGTTTAGTTATTTGCATCTGTACATGATCCATGGATCTGTTGATTATTGGCCTATA
TCCCAATGGTTGTTTGGATA