Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g03780.t01
CDS Infomation

cds chromosome:12X:4:20299125:20306297:-1 gene:VIT_04s0023g03780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCAAGAGGAGCACCATTGTGGTTTCTTCATCGGAGGATGAAGAAAAAGATGGTTCA
TTCAATTCAAAGCGGGGTTATTCGAGGTGCAAATCGAGGCGTAAAAACCCTAGCGGAGCG
AAGAAGGCTCGGATTTCTGGTTCTCAGTCTCGCTTGTGTAGAGATTCCAGTGTGTTCGAT
GAGATGAGATTGTTTTGTGAAGAATTTGGTGAAGGGCTTACAGGTTTCAAGGTATCTGCT
GGTTCTAGTAGGTGTGGAGGAAAGGAGTTATGGGTTGATAAATATAAACCTCGATCCTTG
GAGGAACTTGCTGTTCACAAGAAAAAGGTTGAAGAAGTTACAGTATGGTTTGAGAAAAGA
TTGAGAACTTCAAGGGAAGAAATGTGCAATCTTCTTGTCATCACTGGACAAGCTGGAGTT
GGGAAATCTGCAACTATCCATGCCATTGCGTCTCATCTTGGAGCGAGATTATGTGAATGG
AACACGCCTATTCCTACTATATGGCAAGAACATCTGCATAACACAAATTCAGGGATACGC
TACACATCTAAGTTGGATGAGTTTGAAAGTTTTGTTGAGAGGATGAGGAAATATGGTTTA
ATCCCACCGTCCTTTGCTGGAGAATCCAAATCATCCGTCATACTTTTAATTGATGATCTT
CCTGTGACCAATGGAAATGCTTCTTATAGAAGACTTCGCAACTGCTTGCAACTTCTTGCG
CAATCAACTCAGATTCCAACGGCTATATTGATCACCGATTATGGTAAAGCTGACTCTGCA
GACAACATTGCCACCGCCCGTTGCTTGGAAGAACTTCAGTTGTCTCTGGAGAATGCTGGG
GCTTGTAAGATTGCTTTCAATCCCATCACAAGTAACTCCATTAAGAAGACACTTTCTAAA
ATATGCAGACAAGAGCAGTGTGGTGTGACTGCTGATCAGATTGATCTAATAGCAAGATCT
AGCGGAGGTGATGTCAGACATGCAATTACATCTTTACAATACTTCTGTCTGAAACCAGAC
CCGATGCTTTCTTTATCTTTTTCCGAGCCTGCCCGCACTTATTCGAAAGAAAAATCAGAT
GAGCTCAATCCTTTGGATGATGGATTTTCTTTACCCTTTGGCAGAGATGAAACACTTTCC
CTATTTCATGCCCTGGGAAAATTTCTGCATAACAAAAGAGAGAGTGAAAATGCAATTGCC
CCAGGCCAGGAAGCATTTCTTGTGAGGGAAAGATTGACAAGATTACCGTTAAAAATGGAT
GCTCCAGAAAGGGTTCTTTGTCAAGCACATGTGCAAGCAAGACCTGTTGTTGATTTTCTG
CATGAAAATGTTTTAGATTTTCTGAGTGAGGAAGCAATTGATGATGCATCAGCTGTGGCT
TCATATTTAAGTGATTCTGACTTCCTTCTTGCTGCTCATCGTGGAATGTTAGCCACAAGT
TATGAGGCAGGGAATGTTCTACAATCAGCTGCTGCTTCAGTTGCTGCCCGTGGAGTGCTA
TTTGGAAATTCACACCCATTGGCTTCCAGGTGGCATGCTATTCGCCGCCCAAAGCTCTGG
CAGGTTGAGCAATCCTCACTACATAATAAGTGTGAGATACTAGGCCAGAGATTGGTTGCT
TTGAGCACATCTAATGTATCAGTTATTGCTACTGAGTATATACCTATATTTAAATGGCTT
AGATATGGAGCATCTGGGGGTTTTGAAGATTATCAGGCATTAATACAGGGCAATGAGACA
GAACTTGATGACAATGATAGTATGATTTTGGATGAAAAGGAAAATGAGATTTCTGATGAT
GAAATAGAAGATTGGTAA

Peptide Sequence

PEP ID

VIT_04s0023g03780.t01
PEP Infomation

pep chromosome:12X:4:20299125:20306297:-1 gene:VIT_04s0023g03780 transcript:VIT_04s0023g03780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSKRSTIVVSSSEDEEKDGSFNSKRGYSRCKSRRKNPSGAKKARISGSQSRLCRDSSVFD
EMRLFCEEFGEGLTGFKVSAGSSRCGGKELWVDKYKPRSLEELAVHKKKVEEVTVWFEKR
LRTSREEMCNLLVITGQAGVGKSATIHAIASHLGARLCEWNTPIPTIWQEHLHNTNSGIR
YTSKLDEFESFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNASYRRLRNCLQLLA
QSTQIPTAILITDYGKADSADNIATARCLEELQLSLENAGACKIAFNPITSNSIKKTLSK
ICRQEQCGVTADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKSD
ELNPLDDGFSLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLTRLPLKMD
APERVLCQAHVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDFLLAAHRGMLATS
YEAGNVLQSAAASVAARGVLFGNSHPLASRWHAIRRPKLWQVEQSSLHNKCEILGQRLVA
LSTSNVSVIATEYIPIFKWLRYGASGGFEDYQALIQGNETELDDNDSMILDEKENEISDD
EIEDW

Transcript Sequence

Transcript ID

VIT_04s0023g03780.t01
Transcript Infomation

cdna chromosome:12X:4:20299125:20306297:-1 gene:VIT_04s0023g03780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTCAGTGGTGACAGTAATGAGCAAGAGGAGCACCATTGTGGTTTCTTCATCGGAGGATG
AAGAAAAAGATGGTTCATTCAATTCAAAGCGGGGTTATTCGAGGTGCAAATCGAGGCGTA
AAAACCCTAGCGGAGCGAAGAAGGCTCGGATTTCTGGTTCTCAGTCTCGCTTGTGTAGAG
ATTCCAGTGTGTTCGATGAGATGAGATTGTTTTGTGAAGAATTTGGTGAAGGGCTTACAG
GTTTCAAGGTATCTGCTGGTTCTAGTAGGTGTGGAGGAAAGGAGTTATGGGTTGATAAAT
ATAAACCTCGATCCTTGGAGGAACTTGCTGTTCACAAGAAAAAGGTTGAAGAAGTTACAG
TATGGTTTGAGAAAAGATTGAGAACTTCAAGGGAAGAAATGTGCAATCTTCTTGTCATCA
CTGGACAAGCTGGAGTTGGGAAATCTGCAACTATCCATGCCATTGCGTCTCATCTTGGAG
CGAGATTATGTGAATGGAACACGCCTATTCCTACTATATGGCAAGAACATCTGCATAACA
CAAATTCAGGGATACGCTACACATCTAAGTTGGATGAGTTTGAAAGTTTTGTTGAGAGGA
TGAGGAAATATGGTTTAATCCCACCGTCCTTTGCTGGAGAATCCAAATCATCCGTCATAC
TTTTAATTGATGATCTTCCTGTGACCAATGGAAATGCTTCTTATAGAAGACTTCGCAACT
GCTTGCAACTTCTTGCGCAATCAACTCAGATTCCAACGGCTATATTGATCACCGATTATG
GTAAAGCTGACTCTGCAGACAACATTGCCACCGCCCGTTGCTTGGAAGAACTTCAGTTGT
CTCTGGAGAATGCTGGGGCTTGTAAGATTGCTTTCAATCCCATCACAAGTAACTCCATTA
AGAAGACACTTTCTAAAATATGCAGACAAGAGCAGTGTGGTGTGACTGCTGATCAGATTG
ATCTAATAGCAAGATCTAGCGGAGGTGATGTCAGACATGCAATTACATCTTTACAATACT
TCTGTCTGAAACCAGACCCGATGCTTTCTTTATCTTTTTCCGAGCCTGCCCGCACTTATT
CGAAAGAAAAATCAGATGAGCTCAATCCTTTGGATGATGGATTTTCTTTACCCTTTGGCA
GAGATGAAACACTTTCCCTATTTCATGCCCTGGGAAAATTTCTGCATAACAAAAGAGAGA
GTGAAAATGCAATTGCCCCAGGCCAGGAAGCATTTCTTGTGAGGGAAAGATTGACAAGAT
TACCGTTAAAAATGGATGCTCCAGAAAGGGTTCTTTGTCAAGCACATGTGCAAGCAAGAC
CTGTTGTTGATTTTCTGCATGAAAATGTTTTAGATTTTCTGAGTGAGGAAGCAATTGATG
ATGCATCAGCTGTGGCTTCATATTTAAGTGATTCTGACTTCCTTCTTGCTGCTCATCGTG
GAATGTTAGCCACAAGTTATGAGGCAGGGAATGTTCTACAATCAGCTGCTGCTTCAGTTG
CTGCCCGTGGAGTGCTATTTGGAAATTCACACCCATTGGCTTCCAGGTGGCATGCTATTC
GCCGCCCAAAGCTCTGGCAGGTTGAGCAATCCTCACTACATAATAAGTGTGAGATACTAG
GCCAGAGATTGGTTGCTTTGAGCACATCTAATGTATCAGTTATTGCTACTGAGTATATAC
CTATATTTAAATGGCTTAGATATGGAGCATCTGGGGGTTTTGAAGATTATCAGGCATTAA
TACAGGGCAATGAGACAGAACTTGATGACAATGATAGTATGATTTTGGATGAAAAGGAAA
ATGAGATTTCTGATGATGAAATAGAAGATTGGTAAGCACCATGAGTGACTTCAGTAGCAA
GTTGGGCCTCTGTATATCTCTCAACCTGTAAAGTAGCTCAATTTGACTTTGCCCAGATCA
GTTAGTATTTTCAGTTCAAAAGCATATCTGATTTGAGGCATTCTCCATTATACAAGTTAC
CCTGGAAATGCAGGGAATCCATGCCAGTCGGCAAGTTGAAGACCATTATGTAATACAAAC
ATGGTGTGTTAACCCACAAAGGAAAACCTTGGCAAAACATACTATCCTTGCCATCTAAAG
GTTCCAATGGTTTGGAGAACTGAAAGTGCACAGTAACTGCCTAGTGAAATAGAGGCCTTT
TGTTGCATTTTCCTGATATTGGCCACTTTGATATTCTACTTGCATATTTCCGAATGGCCT
TCACTGAATTTGCATTTGTTATTCTGGAGTCCACATGGATGGTAAACGGTAAGCTCATAT
GGCCCAGCACATGGAAAATTAGTGGCACAACAGCATTTCAGGAAAAATTCAGATGCAGAC
TGCATCTCTGGGACAACCCATCAAGCACTTGTTGCAGGATAAAAAATTGACAGGATAAGC
TGGTACAGTTATGGCTCGGACCCTCTTAGATAAGATTTTGGTATCTGTTTCAGTGTAATT
TTTCCTTGTGTTGAGCATTATTTTCTTCTTTTGTTTT