Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g03720.t01
CDS Infomation

cds chromosome:12X:4:20260788:20262513:1 gene:VIT_04s0023g03720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGAATGTTCCCCCTGGTTTCAGGCCCAGCACATCTGCGCCTTCGTCTCCCGCAAAG
CCAATTGGGGTGTCAAGAACTCGCTCAGACTCCTTTCATGTCACCCACAAAGTCCCTGTT
GGCGACACTCCTTATGTGAGAGCCAAAAAGGTTCAGTTGGTTGACAAGGACCCGGAAAAG
GCAATTCCGCTATTTTGGTCCGCCATTAATGCTGGAGATCGAGTGGATAGTGCGCTCAAG
GACATGGCCATTGTGATGAAGCAACAGAACAGGGCTGAAGAAGCCATTGAGGCTATTAAA
TCGCTGCGAAGTCGTTGTTCAGATCAAGCCCAAGAGTCTCTTGATAATATCCTTCTGGAT
CTGTACAAGAGATGCGGGAGATTGGATGATCAAATTGCACTTTTGAGGCACAAATTGTTC
TTGATTCAACAAGGGATGGCTTTCAATGGGAAGCGCACCAAGACTGCCAGATCCCAAGGG
AAAAAATTTCAGGTGTCCGTGGGACAAGAAGCGACTCGGTTACTGGGGAACTTAGGATGG
GCATTGATGCAGCAGAACAACTATATCGAAGCAGAAGATGCCTACAGGCGGGCACTTTCC
ATGGCTCCAGATAATAACAAGATGTGCAATCTGGGTATCTGCTTGATGAAGCAAGGGAGG
ATTCTGGAAGCCAAAGAAACCCTTAGAAGAGTGAAACCGGCTGTTGCAGATGGCCCGAGA
GGTGTAGATTCCCACCTCAAAGCATTTGAGAGGGCACGGCAGATGCTGCTTGACCTTGAG
TCTGAAATGTTGAATAAGGGAAGCGACCCTGTCGAGCAGAGTCGGCTCTTTGATGCCTTC
CTCAGTTCTTCAGCGCTCTGGCAGCCTCAGCCTTGTAAGGACCAGCACACAACGAATACA
ATCAAATCTCAAGATGATTTTGGGGATGAGAACTTCGACACCAACAGAGTCATGAAGGTT
CTTTCTGGACAGAAGATTGCCAAACCAACGGCTGTTCATGCGAACTCACTCAACGTCGCG
GCATTGCCATTCTACTCATCAAAGACGACCAAGGACCCAATTGGAAAACCACTGCAGGAG
TCCCTTAAGAGAACAAGATCAGGGCATGGTGCTAATTCGATAGGAGTGAATGAAACGGGG
GCGTTCAGAAAGCCCTTAATGGAATCCATGGAACCAGAAAATAAGACTAGAAGGCGATCT
CTTTCACCCGAAGAAAATGGGGACAAGTGGGCAGACTTTCTGCCAGACAGCAAGGAGTTT
GAAGCGGCTCTTATTGCTGCAGTTCTGGGTTCAGCCACTGAAACAGGGAAGAAGACTGTG
GAGACTGGAAACAGTTCTGGAATTTTACAGAATAAGATTGAGAGTAGGTTTAAAGTCTTT
CAAGACATAACACTCTCTCTGAGCCCAAGAGCCTAA

Peptide Sequence

PEP ID

VIT_04s0023g03720.t01
PEP Infomation

pep chromosome:12X:4:20260788:20262513:1 gene:VIT_04s0023g03720 transcript:VIT_04s0023g03720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWNVPPGFRPSTSAPSSPAKPIGVSRTRSDSFHVTHKVPVGDTPYVRAKKVQLVDKDPEK
AIPLFWSAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLD
LYKRCGRLDDQIALLRHKLFLIQQGMAFNGKRTKTARSQGKKFQVSVGQEATRLLGNLGW
ALMQQNNYIEAEDAYRRALSMAPDNNKMCNLGICLMKQGRILEAKETLRRVKPAVADGPR
GVDSHLKAFERARQMLLDLESEMLNKGSDPVEQSRLFDAFLSSSALWQPQPCKDQHTTNT
IKSQDDFGDENFDTNRVMKVLSGQKIAKPTAVHANSLNVAALPFYSSKTTKDPIGKPLQE
SLKRTRSGHGANSIGVNETGAFRKPLMESMEPENKTRRRSLSPEENGDKWADFLPDSKEF
EAALIAAVLGSATETGKKTVETGNSSGILQNKIESRFKVFQDITLSLSPRA

Transcript Sequence

Transcript ID

VIT_04s0023g03720.t01
Transcript Infomation

cdna chromosome:12X:4:20260788:20262513:1 gene:VIT_04s0023g03720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAAACCCCCGAAGATGCAAGACATGTGGAATGTTCCCCCTGGTTTCAGGCCCAGCACAT
CTGCGCCTTCGTCTCCCGCAAAGCCAATTGGGGTGTCAAGAACTCGCTCAGACTCCTTTC
ATGTCACCCACAAAGTCCCTGTTGGCGACACTCCTTATGTGAGAGCCAAAAAGGTTCAGT
TGGTTGACAAGGACCCGGAAAAGGCAATTCCGCTATTTTGGTCCGCCATTAATGCTGGAG
ATCGAGTGGATAGTGCGCTCAAGGACATGGCCATTGTGATGAAGCAACAGAACAGGGCTG
AAGAAGCCATTGAGGCTATTAAATCGCTGCGAAGTCGTTGTTCAGATCAAGCCCAAGAGT
CTCTTGATAATATCCTTCTGGATCTGTACAAGAGATGCGGGAGATTGGATGATCAAATTG
CACTTTTGAGGCACAAATTGTTCTTGATTCAACAAGGGATGGCTTTCAATGGGAAGCGCA
CCAAGACTGCCAGATCCCAAGGGAAAAAATTTCAGGTGTCCGTGGGACAAGAAGCGACTC
GGTTACTGGGGAACTTAGGATGGGCATTGATGCAGCAGAACAACTATATCGAAGCAGAAG
ATGCCTACAGGCGGGCACTTTCCATGGCTCCAGATAATAACAAGATGTGCAATCTGGGTA
TCTGCTTGATGAAGCAAGGGAGGATTCTGGAAGCCAAAGAAACCCTTAGAAGAGTGAAAC
CGGCTGTTGCAGATGGCCCGAGAGGTGTAGATTCCCACCTCAAAGCATTTGAGAGGGCAC
GGCAGATGCTGCTTGACCTTGAGTCTGAAATGTTGAATAAGGGAAGCGACCCTGTCGAGC
AGAGTCGGCTCTTTGATGCCTTCCTCAGTTCTTCAGCGCTCTGGCAGCCTCAGCCTTGTA
AGGACCAGCACACAACGAATACAATCAAATCTCAAGATGATTTTGGGGATGAGAACTTCG
ACACCAACAGAGTCATGAAGGTTCTTTCTGGACAGAAGATTGCCAAACCAACGGCTGTTC
ATGCGAACTCACTCAACGTCGCGGCATTGCCATTCTACTCATCAAAGACGACCAAGGACC
CAATTGGAAAACCACTGCAGGAGTCCCTTAAGAGAACAAGATCAGGGCATGGTGCTAATT
CGATAGGAGTGAATGAAACGGGGGCGTTCAGAAAGCCCTTAATGGAATCCATGGAACCAG
AAAATAAGACTAGAAGGCGATCTCTTTCACCCGAAGAAAATGGGGACAAGTGGGCAGACT
TTCTGCCAGACAGCAAGGAGTTTGAAGCGGCTCTTATTGCTGCAGTTCTGGGTTCAGCCA
CTGAAACAGGGAAGAAGACTGTGGAGACTGGAAACAGTTCTGGAATTTTACAGAATAAGA
TTGAGAGTAGGTTTAAAGTCTTTCAAGACATAACACTCTCTCTGAGCCCAAGAGCCTAA