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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g03340.t01
CDS Infomation

cds chromosome:12X:4:19853974:19859159:1 gene:VIT_04s0023g03340 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7SP01]
Sequence

ATGGGCCGGGTCGAAACCAAGCCCATCCCAATGCTGGCCCATCATTGTGAATCTCAAAAG
AAAAAAGAAAAGGAAAGAAGTCAAGAACAGTCGATCCGATTCATATTGTTGCAGAACAGG
CAGGGAAAGACTCGATTAGCCAAGTACTACGTTCCTTTCGAGGAATCTGAGAAACACAAG
GTCGAATACGAGGTTCATCGGTTGGTGGTCAACAGAGATCCCAAACATACAAACTTTGTA
GAGTTCCGTACACACAAGGTCATCTACAGGCGATATGCTGGATTGTTCTTCTCATTGTGT
GTTGATATCACTGATAATGAGTTAGCATATTTGGAGTGCATCCATCTCTTTGTTGAGATA
TTGGACCATTTCTTCAGCAATGTGTGTGAGCTAGATTTGGTATTTAACTTTCACAAGGTA
TATCTAATACTTGATGAGTTCATTCTTGCTGGAGAGCTCCAGGAAACAAGCAAGAAGGCA
ATAATAGAGAGAATGGGGGAGTTGGAAAAGCAAGAATGA

Peptide Sequence

PEP ID

VIT_04s0023g03340.t01
PEP Infomation

pep chromosome:12X:4:19853974:19859159:1 gene:VIT_04s0023g03340 transcript:VIT_04s0023g03340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7SP01]
Sequence

MGRVETKPIPMLAHHCESQKKKEKERSQEQSIRFILLQNRQGKTRLAKYYVPFEESEKHK
VEYEVHRLVVNRDPKHTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEI
LDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKKAIIERMGELEKQE

Transcript Sequence

Transcript ID

VIT_04s0023g03340.t01
Transcript Infomation

cdna chromosome:12X:4:19853974:19859159:1 gene:VIT_04s0023g03340 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7SP01]
Sequence

ATGGGCCGGGTCGAAACCAAGCCCATCCCAATGCTGGCCCATCATTGTGAATCTCAAAAG
AAAAAAGAAAAGGAAAGAAGTCAAGAACAGTCGATCCGATTCATATTGTTGCAGAACAGG
CAGGGAAAGACTCGATTAGCCAAGTACTACGTTCCTTTCGAGGAATCTGAGAAACACAAG
GTCGAATACGAGGTTCATCGGTTGGTGGTCAACAGAGATCCCAAACATACAAACTTTGTA
GAGTTCCGTACACACAAGGTCATCTACAGGCGATATGCTGGATTGTTCTTCTCATTGTGT
GTTGATATCACTGATAATGAGTTAGCATATTTGGAGTGCATCCATCTCTTTGTTGAGATA
TTGGACCATTTCTTCAGCAATGTGTGTGAGCTAGATTTGGTATTTAACTTTCACAAGGTA
TATCTAATACTTGATGAGTTCATTCTTGCTGGAGAGCTCCAGGAAACAAGCAAGAAGGCA
ATAATAGAGAGAATGGGGGAGTTGGAAAAGCAAGAATGAGAATGGGGGATCTCCACTCAG
TCGTCTTATTTTGTTGTTCATCCAATCTGTTTCTTTGCTTCAAGAACTCTCGCAGCTTTG
TAATGTCGGAAAATGGATCTGTCTCTTGTTCTCCAGCATTTTTCTTATTTGGTATGTGAG
CACCAGGGAGGTGTTGGCTCTCGGAGTTACTAAAAGGTTCATTTTTATGGTTTTGTGTAT
GGTACATGGGGTTTGTGCATAAACATTGTTTTGATTCATTTCCCTTCAAAATGATTCTAG
GCTCATTGTTGGGTCCA