Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g02790.t01
CDS Infomation

cds chromosome:12X:4:19370563:19372899:1 gene:VIT_04s0023g02790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACATTACATGGTAGGAAACACTACGAGCATCGTGAGAGGCATTGCCCAGAGGAGCCA
CCCGCATGCCTGGTGCCACTGCCGGAGATGTACAAGTCGCCAGTTGAGTGGCCCCAAAGC
AGAGATAAGATATGGTATCACAATGTTCCTCACACCCTTCTGGCAGAGGTGAAGGGGCAC
CAGAACTGGGTGAAGGTGACTGGGGAGTTCCTCACTTTCCCTGGCGGTGGAACACAATTC
ATTCACGGAGCCATGCACTACATTGATTTTATTGAAAAAGCGGTACCTGATATTGCATGG
GGGAAGCGCACTCGGGTAATATTGGACGTTGGCTGCGGGGTTGCCAGCTTTGGCGGCTAT
CTTTTCGAAAGAGACGTGCTTACAATGTCTTTTGCACCCAAGGACGAACATGAAGCTCAA
GTTCAATTCGCCCTCGAAAGGGGAATACCTGCTATCTCTGCCGTGATGGGATCTCAGCGC
CTGCCATTTCCAAGCAGGGTCTTTGATGTTGTGCACTGTGCGCGTTGTAGAGTCCCATGG
CATGTAGAAGGTGGTACTCTTCTCTTGGAACTGAACCGGGTTCTGCGTCCTGGAGGTTAT
TTTGTATGGTCAGCCACCCCTGTATACCAAAAGCTTAAAGAAGATGTTGAGATATGGAAA
GAGATGTCAGCACTCACAATGTCCATGTGTTGGGAGCTTGTGAGCATCAACAGGGATAAA
TTGAATTCTGTAGGTGCTGCCATCTATCGCAAACCTACCTCCAATGTTTGTTATGACCAA
AGAAAGCACAAGCGTCCTCCAATGTGTAAAACCGATGATGATCCGAATGCAGCCTGGTAT
GTGCCTCTGCAGGCATGCATGCATCGGGCACCAGTTGATGGAGCAGAGAGAGGAACACGG
TGGCCTGAGGAATGGCCGCGTAGACTGCAGGTAAGTCCATACTGGTTAAACAAAGCGCAG
ATGGGAATATATGGAAGGCCAGCTCCTGATGATTTCGCATCGGACTATGAACACTGGAAG
CGAGTGGTGAACAAGTCTTATCTTAATGGACTGGGCATCAGCTGGTCCAACGTCAGAAAC
GTCATGGACATGAGAGCTGTTTATGGAGGGTTTGCAGCGGCACTGAAGGACCTCAAGGTG
TGGGTCTTAAATGTGGTGAACATAGATTCTCCAGATACACTTCCCATAATCTACGAGCGG
GGTCTCTTTGGAATATATCATGACTGGTGCGAATCCTTCAGCACATATCCTCGAACCTAT
GATCTGCTGCATGCTGATCATCTTTTCTCAAAGCTGAAAAAGAGGTGCAAAATTGCTCCG
TTGATGGCAGAGATCGATAGAATAGTGAGACCTGGAGGTAAATTGATTGTGAGAGATGAG
TCCAGCGCAATTGGGGAAGTGGAGAACCTGTTGAAATCTCTGCATTGGGAGGTCCATCTA
GCCTTCTCCAAAGACCAAGAAGGAATACTCAGCGCACAGAAATCCTATTGGCGGCCAGAC
ATACATGTGGCTTCTTCCTGA

Peptide Sequence

PEP ID

VIT_04s0023g02790.t01
PEP Infomation

pep chromosome:12X:4:19370563:19372899:1 gene:VIT_04s0023g02790 transcript:VIT_04s0023g02790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTLHGRKHYEHRERHCPEEPPACLVPLPEMYKSPVEWPQSRDKIWYHNVPHTLLAEVKGH
QNWVKVTGEFLTFPGGGTQFIHGAMHYIDFIEKAVPDIAWGKRTRVILDVGCGVASFGGY
LFERDVLTMSFAPKDEHEAQVQFALERGIPAISAVMGSQRLPFPSRVFDVVHCARCRVPW
HVEGGTLLLELNRVLRPGGYFVWSATPVYQKLKEDVEIWKEMSALTMSMCWELVSINRDK
LNSVGAAIYRKPTSNVCYDQRKHKRPPMCKTDDDPNAAWYVPLQACMHRAPVDGAERGTR
WPEEWPRRLQVSPYWLNKAQMGIYGRPAPDDFASDYEHWKRVVNKSYLNGLGISWSNVRN
VMDMRAVYGGFAAALKDLKVWVLNVVNIDSPDTLPIIYERGLFGIYHDWCESFSTYPRTY
DLLHADHLFSKLKKRCKIAPLMAEIDRIVRPGGKLIVRDESSAIGEVENLLKSLHWEVHL
AFSKDQEGILSAQKSYWRPDIHVASS

Transcript Sequence

Transcript ID

VIT_04s0023g02790.t01
Transcript Infomation

cdna chromosome:12X:4:19370563:19372899:1 gene:VIT_04s0023g02790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACTCAGGCGGATCAATCCGAGAATCAAAAGGAGAGAAGGAAGGATGGGCCAGATGGGAC
TATCTATGGCTACACTTGGCAGCTCTGCAATGAAACAGCAGGCCCAGACTATATTCCCTG
TTTGGACAACGAGAAAGCAATAATGACATTACATGGTAGGAAACACTACGAGCATCGTGA
GAGGCATTGCCCAGAGGAGCCACCCGCATGCCTGGTGCCACTGCCGGAGATGTACAAGTC
GCCAGTTGAGTGGCCCCAAAGCAGAGATAAGATATGGTATCACAATGTTCCTCACACCCT
TCTGGCAGAGGTGAAGGGGCACCAGAACTGGGTGAAGGTGACTGGGGAGTTCCTCACTTT
CCCTGGCGGTGGAACACAATTCATTCACGGAGCCATGCACTACATTGATTTTATTGAAAA
AGCGGTACCTGATATTGCATGGGGGAAGCGCACTCGGGTAATATTGGACGTTGGCTGCGG
GGTTGCCAGCTTTGGCGGCTATCTTTTCGAAAGAGACGTGCTTACAATGTCTTTTGCACC
CAAGGACGAACATGAAGCTCAAGTTCAATTCGCCCTCGAAAGGGGAATACCTGCTATCTC
TGCCGTGATGGGATCTCAGCGCCTGCCATTTCCAAGCAGGGTCTTTGATGTTGTGCACTG
TGCGCGTTGTAGAGTCCCATGGCATGTAGAAGGTGGTACTCTTCTCTTGGAACTGAACCG
GGTTCTGCGTCCTGGAGGTTATTTTGTATGGTCAGCCACCCCTGTATACCAAAAGCTTAA
AGAAGATGTTGAGATATGGAAAGAGATGTCAGCACTCACAATGTCCATGTGTTGGGAGCT
TGTGAGCATCAACAGGGATAAATTGAATTCTGTAGGTGCTGCCATCTATCGCAAACCTAC
CTCCAATGTTTGTTATGACCAAAGAAAGCACAAGCGTCCTCCAATGTGTAAAACCGATGA
TGATCCGAATGCAGCCTGGTATGTGCCTCTGCAGGCATGCATGCATCGGGCACCAGTTGA
TGGAGCAGAGAGAGGAACACGGTGGCCTGAGGAATGGCCGCGTAGACTGCAGGTAAGTCC
ATACTGGTTAAACAAAGCGCAGATGGGAATATATGGAAGGCCAGCTCCTGATGATTTCGC
ATCGGACTATGAACACTGGAAGCGAGTGGTGAACAAGTCTTATCTTAATGGACTGGGCAT
CAGCTGGTCCAACGTCAGAAACGTCATGGACATGAGAGCTGTTTATGGAGGGTTTGCAGC
GGCACTGAAGGACCTCAAGGTGTGGGTCTTAAATGTGGTGAACATAGATTCTCCAGATAC
ACTTCCCATAATCTACGAGCGGGGTCTCTTTGGAATATATCATGACTGGTGCGAATCCTT
CAGCACATATCCTCGAACCTATGATCTGCTGCATGCTGATCATCTTTTCTCAAAGCTGAA
AAAGAGGTGCAAAATTGCTCCGTTGATGGCAGAGATCGATAGAATAGTGAGACCTGGAGG
TAAATTGATTGTGAGAGATGAGTCCAGCGCAATTGGGGAAGTGGAGAACCTGTTGAAATC
TCTGCATTGGGAGGTCCATCTAGCCTTCTCCAAAGACCAAGAAGGAATACTCAGCGCACA
GAAATCCTATTGGCGGCCAGACATACATGTGGCTTCTTCCTGA