Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g02040.t01
CDS Infomation

cds chromosome:12X:4:18558616:18560926:-1 gene:VIT_04s0023g02040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RER1 [Source:UniProtKB/TrEMBL;Acc:F6GWV2]
Sequence

ATGGAGGAAAACGGAGGCGATTTCGCCTTGGCTGCGGCGCCGCTGGCCAAATGGAAGAGC
GACTTTTCGAGGGCTTTTCAGTACTATTTGGATAGATCTGCACCACATATAGCTGAGAGG
TGGCTAGGAACACTAGTGGCAGCATCAATTTACTTTTTGCGAGTTTACTATGTTCAAGGG
TTTTATGTGATCTCCTATGGGTTGGGAATCTATGTTTTGAATCTCTTGATCGGCTTTCTG
TCGCCCAAGGTTGATCCTGAACTGGAGGCTTTGGATGGGGCTTCGCTGCCCACGAAAGAT
TCCGACGAGTTTAAGCCTTTCGTTAGACGCCTCCCTGAATTTAAGTTCTGGTATTCCATT
ACCAAGGCTTTTGTTGTTGCATTCGGATTGACCTTCTTCTCTATGTTGGATGTACCTGTT
TTCTGGCCCATATTGTTATGCTACTGGATATTTCTGTTTGTCCTCACGATGAAGCGTCAA
ATTCTACACATGATCAAATACAAATACGTCCCATTTGACATGGGAAAGATGAGGTACACT
GGGAAGAAGCCTTCTGCAAGTGGCAGCCGGTTAGCTAGAGACTGA

Peptide Sequence

PEP ID

VIT_04s0023g02040.t01
PEP Infomation

pep chromosome:12X:4:18558616:18560926:-1 gene:VIT_04s0023g02040 transcript:VIT_04s0023g02040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RER1 [Source:UniProtKB/TrEMBL;Acc:F6GWV2]
Sequence

MEENGGDFALAAAPLAKWKSDFSRAFQYYLDRSAPHIAERWLGTLVAASIYFLRVYYVQG
FYVISYGLGIYVLNLLIGFLSPKVDPELEALDGASLPTKDSDEFKPFVRRLPEFKFWYSI
TKAFVVAFGLTFFSMLDVPVFWPILLCYWIFLFVLTMKRQILHMIKYKYVPFDMGKMRYT
GKKPSASGSRLARD

Transcript Sequence

Transcript ID

VIT_04s0023g02040.t01
Transcript Infomation

cdna chromosome:12X:4:18558616:18560926:-1 gene:VIT_04s0023g02040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RER1 [Source:UniProtKB/TrEMBL;Acc:F6GWV2]
Sequence

AACAAACCCATTTTCCAGACTTGATTGCTTTTAGTTTGATTCTTCAATCCTCAAACTTTC
TATCCCTCCATTATTATCCAGGGGTTTATCTGTGTTTTAAGGAGAGCCCTGCAATTCAAG
ATTTGAGTTTCGTGGGACCAAGAAACAGAAAATCAGAGTGAAATCTCACTTCACATGGAG
GAAAACGGAGGCGATTTCGCCTTGGCTGCGGCGCCGCTGGCCAAATGGAAGAGCGACTTT
TCGAGGGCTTTTCAGTACTATTTGGATAGATCTGCACCACATATAGCTGAGAGGTGGCTA
GGAACACTAGTGGCAGCATCAATTTACTTTTTGCGAGTTTACTATGTTCAAGGGTTTTAT
GTGATCTCCTATGGGTTGGGAATCTATGTTTTGAATCTCTTGATCGGCTTTCTGTCGCCC
AAGGTTGATCCTGAACTGGAGGCTTTGGATGGGGCTTCGCTGCCCACGAAAGATTCCGAC
GAGTTTAAGCCTTTCGTTAGACGCCTCCCTGAATTTAAGTTCTGGTATTCCATTACCAAG
GCTTTTGTTGTTGCATTCGGATTGACCTTCTTCTCTATGTTGGATGTACCTGTTTTCTGG
CCCATATTGTTATGCTACTGGATATTTCTGTTTGTCCTCACGATGAAGCGTCAAATTCTA
CACATGATCAAATACAAATACGTCCCATTTGACATGGGAAAGATGAGGTACACTGGGAAG
AAGCCTTCTGCAAGTGGCAGCCGGTTAGCTAGAGACTGAACTGAAGCTGCGCATTTCCAT
TCTCCAACGGACCCTGGGAATGGAGCTCAAGTTTTTAACTGCTTTTAGCGTTTTGATGTT
GGGTCCTTCACATTGTAATGGGTTTCCTCCCAAACTCTATTAAGGGTTCAGATTCTGGAA
AGTTTTGCTTCTCTCCGGTGCTGAGGTTCATCTTTATGGTTTCATGGACTATCAATCAAT
GTCAGTCGGCCAGAAGTGAAGCTTGATTGTGCATACCTATAGGATGAATATTCTATTTTC
ATATGATATTACAGCAAAAACTCCCTTCAA