Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g02000.t01
CDS Infomation

cds chromosome:12X:4:18539924:18546873:-1 gene:VIT_04s0023g02000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCTTCATTCAGGATCTTCAATTCCTCGGCTCTCAATCGCCGCCACCTCTCCGCT
TCACTTCTTAACAAATCTACTTCTCTCAAATTCCCTCCCACCCTTCACCGTCCTTCACTC
TGTCGGAGGGTTTCGCCGTCTTCTCCGCTCTTCGTCGCTTTTCCCAACGTTGTTTCCATA
AACCCCAAATGTTTCGCTCGCATTCGCGCTTCCTCATCGATCGGGCCTTTTCCGCCGTGC
CCTTCTCCAAATTCTAATCCATTTGGGTTTCTTCTATCTCTCTCTCATTCTCACTCCTCT
CCTCCGCTGGAGTTCGATTCCAATGAGAAGGTTCTGGAGTGGAATCGAGCTCCCGAGGGA
GGCGTTAATGGCGGAAGTGTAAGGGATCGTGGTCCTGCCGTCACGGTGGTGTTGCTGGGT
TGGCTTGGAGCGAAGCCGAAGCACTTGAGGAGGTACGTGGATTTGTATACTTCCAGGGGA
ATTCACGCCGTAACTTTCGTTGTTCCCGTGAGAGAGGTGCTCTGGATTGATTTGGGAAGG
AGGGTTGAGAAACGGATCGCGGAGATGACTCAGGAGCTGGTTTCGTGGTTATCGGAAACG
GAAAATGATGGTCGCGAGCGGCACTTGCTTTTTCACACCTTCAGCAATACCGGTTGGTTT
GCTTATGGTGCAATTCTTGACCACTTGCAGGGTAGACCGGACCTAATGGAGAAGATCAAA
GGATGTGTCGTTGATTCGGGAGGTGACCCGGAAATAAATCCTCAGGTCTGGGCAGCTGGA
TTTTCTGCTGCACTGCTGAAAAAAAACAGCTCTTCAGCATACTCTTTAGTTGAAGTCACA
GAAAGAAATGAATCCAAAAGCAAAGTAGATTCATCAAAGGTGCAAGAAAAGGAGCCTCTG
ATAATTGAAACCATGCTTTTGTCGGTATTAGAGTTCTTCTTCTCTGTTATTCTAAGGTTG
CCTGATGTAAATCGGAGGTTAACAAAGATCATCTCCATCCTCTCAAAGAACCAGCCTCCC
TGTTCACAACTTTACCTGTATAGCACAGCTGATAAAGTCATTCCATATCACTCAGTAGAA
ATGTTTATCAATGAGCAGATGAGGATGGGAAAAAAAGTGCGGTCCTTTAACTTTGGATTA
TCCCCCCATGTAGACCATTACAGGACTTTCCCAAATCTATATTCTTCAGAAATACATAAT
TTCTTGAAGGAGTGTTTGGCTGAAGTCAAGAAGATTTTTCTTTCCTCCAGCGTCAGCTCC
TGGCCGCCCCTCCACCTCTCTCTCTCATTTCTCACTTCCTCACCATCACACCTCCCGTCG
CCGCCTCTCAGTCCACCCTCAGCGTCCTCGTCGCTGCGTGGCGGTGAACGTGTGTAG

Peptide Sequence

PEP ID

VIT_04s0023g02000.t01
PEP Infomation

pep chromosome:12X:4:18539924:18546873:-1 gene:VIT_04s0023g02000 transcript:VIT_04s0023g02000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEASFRIFNSSALNRRHLSASLLNKSTSLKFPPTLHRPSLCRRVSPSSPLFVAFPNVVSI
NPKCFARIRASSSIGPFPPCPSPNSNPFGFLLSLSHSHSSPPLEFDSNEKVLEWNRAPEG
GVNGGSVRDRGPAVTVVLLGWLGAKPKHLRRYVDLYTSRGIHAVTFVVPVREVLWIDLGR
RVEKRIAEMTQELVSWLSETENDGRERHLLFHTFSNTGWFAYGAILDHLQGRPDLMEKIK
GCVVDSGGDPEINPQVWAAGFSAALLKKNSSSAYSLVEVTERNESKSKVDSSKVQEKEPL
IIETMLLSVLEFFFSVILRLPDVNRRLTKIISILSKNQPPCSQLYLYSTADKVIPYHSVE
MFINEQMRMGKKVRSFNFGLSPHVDHYRTFPNLYSSEIHNFLKECLAEVKKIFLSSSVSS
WPPLHLSLSFLTSSPSHLPSPPLSPPSASSSLRGGERV

Transcript Sequence

Transcript ID

VIT_04s0023g02000.t01
Transcript Infomation

cdna chromosome:12X:4:18539924:18546873:-1 gene:VIT_04s0023g02000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCAAATCAAATCTAATCTGAGAAACCAGTTTGACAATTTGACAATTTGACAATTTGAAT
GTCCGAAATGGAAAGGGCAGACAGAGCAATGATGTCAACAGTGGAGATACTGTGAAGGCG
CTCCCCGTCTTCAACAATTCTGTTGACGGTTGGGATCTCCACACAGCCATTGTCCGCATT
GATCCACATTAAACCCATCTCACTCGGACCCTCAACACACTACTCTCCGCCATGGAGGCT
TCATTCAGGATCTTCAATTCCTCGGCTCTCAATCGCCGCCACCTCTCCGCTTCACTTCTT
AACAAATCTACTTCTCTCAAATTCCCTCCCACCCTTCACCGTCCTTCACTCTGTCGGAGG
GTTTCGCCGTCTTCTCCGCTCTTCGTCGCTTTTCCCAACGTTGTTTCCATAAACCCCAAA
TGTTTCGCTCGCATTCGCGCTTCCTCATCGATCGGGCCTTTTCCGCCGTGCCCTTCTCCA
AATTCTAATCCATTTGGGTTTCTTCTATCTCTCTCTCATTCTCACTCCTCTCCTCCGCTG
GAGTTCGATTCCAATGAGAAGGTTCTGGAGTGGAATCGAGCTCCCGAGGGAGGCGTTAAT
GGCGGAAGTGTAAGGGATCGTGGTCCTGCCGTCACGGTGGTGTTGCTGGGTTGGCTTGGA
GCGAAGCCGAAGCACTTGAGGAGGTACGTGGATTTGTATACTTCCAGGGGAATTCACGCC
GTAACTTTCGTTGTTCCCGTGAGAGAGGTGCTCTGGATTGATTTGGGAAGGAGGGTTGAG
AAACGGATCGCGGAGATGACTCAGGAGCTGGTTTCGTGGTTATCGGAAACGGAAAATGAT
GGTCGCGAGCGGCACTTGCTTTTTCACACCTTCAGCAATACCGGTTGGTTTGCTTATGGT
GCAATTCTTGACCACTTGCAGGGTAGACCGGACCTAATGGAGAAGATCAAAGGATGTGTC
GTTGATTCGGGAGGTGACCCGGAAATAAATCCTCAGGTCTGGGCAGCTGGATTTTCTGCT
GCACTGCTGAAAAAAAACAGCTCTTCAGCATACTCTTTAGTTGAAGTCACAGAAAGAAAT
GAATCCAAAAGCAAAGTAGATTCATCAAAGGTGCAAGAAAAGGAGCCTCTGATAATTGAA
ACCATGCTTTTGTCGGTATTAGAGTTCTTCTTCTCTGTTATTCTAAGGTTGCCTGATGTA
AATCGGAGGTTAACAAAGATCATCTCCATCCTCTCAAAGAACCAGCCTCCCTGTTCACAA
CTTTACCTGTATAGCACAGCTGATAAAGTCATTCCATATCACTCAGTAGAAATGTTTATC
AATGAGCAGATGAGGATGGGAAAAAAAGTGCGGTCCTTTAACTTTGGATTATCCCCCCAT
GTAGACCATTACAGGACTTTCCCAAATCTATATTCTTCAGAAATACATAATTTCTTGAAG
GAGTGTTTGGCTGAAGTCAAGAAGATTTTTCTTTCCTCCAGCGTCAGCTCCTGGCCGCCC
CTCCACCTCTCTCTCTCATTTCTCACTTCCTCACCATCACACCTCCCGTCGCCGCCTCTC
AGTCCACCCTCAGCGTCCTCGTCGCTGCGTGGCGGTGAACGTGTGTAGAAAATCACCATC
AATCATCAAAATGGGTGCACTTTGGGGTTGGACCGATCGGGCTCAATTCGATAAATGACA
ATACCCAAGCCCGGTACTTTCTATTGGCAATGAAAGATAAATAAACAGCTCCTTCAAAAG
GAATGAAGTGGTTGGTGGGGCAGGTGAACTAGTCCAAGTTCAATAGTTGTTGTCTCTAGA
TCTTATTTCACTA