Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g01790.t01
CDS Infomation

cds chromosome:12X:4:18370614:18382069:-1 gene:VIT_04s0023g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGCGAAGGTATTTCAGTAGCAACATCAACTCCACGCGCACATTGAAGGAGAAGAAA
TGGGACGCTCTGGTGATCGGCGCCGGCCACAACGGCCTCACAGCCGCTGCTTACTTGGCT
CGCTCTGGCCTCTCCGTCGCCGTTCTCGAGCGTCGCCACATCATCGGCGGTGCTGCCATC
ACTGAAGAACTCGTTCCTGGCTTTAAGTTCTCCCGCTGCAGCTACGTCCAGAGCCTCCTC
CGCCCCTCCATCATCAAGGACTTGGAGTTGGCAAAACATGGGTTGAAGTTGTTGAAGATG
AAAGCGGCTACGTTCACACCCTGTGTTGATGGTCGCTATCTTCTTTTGACTTATAATCAG
AAGCAAAATTACAAGGAGATTTCCAGGTTCTCAAAACGAGATGCAGATGCTTTTCCAAGA
TATGAAAGTCAACTAATTAAATTCTGTGAAGTCATGGATTTTCTTTTGGATTCACTTACT
CCCGAAACATTAAATCATGATTCATCTTTTACCGATCGGCTGAGAGACAAGTTGAACAAG
TCAGTTTTTTGGGGTCGTTTTCTGCATCGGGTTCTCTCACTGGGGCAGAAAGATTTGGTG
GACTTTGTGGACCTTCTGTTGTCCCCAACTTCAAAGGTTTTGAACTACTGGTTTGAGACA
GATGTGCTGAAGGCAACACTTGCAGGGGATGCTATCATTGGGAGTATGGCAAGCATCCAT
GCACCTGGAAGTGGATATGTTCTGCTGCATCATGTAATGGGCAATACTGATGGTGAACGT
AATGTTTGGTCGCATGTTGAAGGTGGCATGGGTTCAGTATCATCAGCTATAAGTAAGGCT
GCTAGGGAGGTTGGGGCACATATTGTGACAAATGCAGAGGTTTCACAGTTGATGATTGAA
GACTCTGGTGTTGTAAATGGGGTACTACTGGAGGATGGGACACAGGTGTATTCTTCTGTT
GTTTTGTCAAATGCAACCCCTTATAAGACTTTCATGGAATTAGTGCCTCAAAATGTTCTT
CCAGATGATTTTTTCCATGCTATTAAGAACATTGACTACAAATCTGGAACCACAAAAATT
AATGTAGCTGTTGATAAATTGCCTGAGTTCCAGTGTTACAAGTTCAACCATCCAGAAGCA
GGTCCTCACCATACAGCTACCATTCACATTGGTACTGACAGTATGGAGGAGATTGGCTTA
GCTTGTCAAGATGCTTGGAATGGCCTATCATCACGGAGGCCTGTTATTGAGATGACAATT
CCTTCTTCATTGGACAAGACTATTTCTCCTCCTGGTAAGCATGTGGTCAGTCTATTTACA
CAATATACACCCTATAATCTCACCGATGGTAGCTGGGAAGATCCTGCATACAGAGAATCA
TATGCAAAAAGGTGTTTCAACTTGATTGATGAATATGCCCCTGGCTTTAGCTCATCTGTC
ATTGGTTATGACATGCTGGCACCACCGGATCTTGAGAGGGTGATTGGTCTGACAGGGGGG
AATATTTTTCATGGTGCTATGAGTTTGGATTCTCTTTTCCTGATGCGCCCTGTCAAAGGA
TGGTCAGGTTATAGGACTCCAGTGAGAGGGCTGTATTTGTGCGGCAGTGGAACACATCCT
GGTGGTGGTGTGATGGGGGCGCCTGGTCGTAACTCTGCGCAAGTCGTCATTCAAGATCTT
AAAAAATATTACGTATGA

Peptide Sequence

PEP ID

VIT_04s0023g01790.t01
PEP Infomation

pep chromosome:12X:4:18370614:18382069:-1 gene:VIT_04s0023g01790 transcript:VIT_04s0023g01790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWRRYFSSNINSTRTLKEKKWDALVIGAGHNGLTAAAYLARSGLSVAVLERRHIIGGAAI
TEELVPGFKFSRCSYVQSLLRPSIIKDLELAKHGLKLLKMKAATFTPCVDGRYLLLTYNQ
KQNYKEISRFSKRDADAFPRYESQLIKFCEVMDFLLDSLTPETLNHDSSFTDRLRDKLNK
SVFWGRFLHRVLSLGQKDLVDFVDLLLSPTSKVLNYWFETDVLKATLAGDAIIGSMASIH
APGSGYVLLHHVMGNTDGERNVWSHVEGGMGSVSSAISKAAREVGAHIVTNAEVSQLMIE
DSGVVNGVLLEDGTQVYSSVVLSNATPYKTFMELVPQNVLPDDFFHAIKNIDYKSGTTKI
NVAVDKLPEFQCYKFNHPEAGPHHTATIHIGTDSMEEIGLACQDAWNGLSSRRPVIEMTI
PSSLDKTISPPGKHVVSLFTQYTPYNLTDGSWEDPAYRESYAKRCFNLIDEYAPGFSSSV
IGYDMLAPPDLERVIGLTGGNIFHGAMSLDSLFLMRPVKGWSGYRTPVRGLYLCGSGTHP
GGGVMGAPGRNSAQVVIQDLKKYYV

Transcript Sequence

Transcript ID

VIT_04s0023g01790.t01
Transcript Infomation

cdna chromosome:12X:4:18370614:18382069:-1 gene:VIT_04s0023g01790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGAAATGTGGCGAAGGTATTTCAGTAGCAACATCAACTCCACGCGCACATTGAAGGAGA
AGAAATGGGACGCTCTGGTGATCGGCGCCGGCCACAACGGCCTCACAGCCGCTGCTTACT
TGGCTCGCTCTGGCCTCTCCGTCGCCGTTCTCGAGCGTCGCCACATCATCGGCGGTGCTG
CCATCACTGAAGAACTCGTTCCTGGCTTTAAGTTCTCCCGCTGCAGCTACGTCCAGAGCC
TCCTCCGCCCCTCCATCATCAAGGACTTGGAGTTGGCAAAACATGGGTTGAAGTTGTTGA
AGATGAAAGCGGCTACGTTCACACCCTGTGTTGATGGTCGCTATCTTCTTTTGACTTATA
ATCAGAAGCAAAATTACAAGGAGATTTCCAGGTTCTCAAAACGAGATGCAGATGCTTTTC
CAAGATATGAAAGTCAACTAATTAAATTCTGTGAAGTCATGGATTTTCTTTTGGATTCAC
TTACTCCCGAAACATTAAATCATGATTCATCTTTTACCGATCGGCTGAGAGACAAGTTGA
ACAAGTCAGTTTTTTGGGGTCGTTTTCTGCATCGGGTTCTCTCACTGGGGCAGAAAGATT
TGGTGGACTTTGTGGACCTTCTGTTGTCCCCAACTTCAAAGGTTTTGAACTACTGGTTTG
AGACAGATGTGCTGAAGGCAACACTTGCAGGGGATGCTATCATTGGGAGTATGGCAAGCA
TCCATGCACCTGGAAGTGGATATGTTCTGCTGCATCATGTAATGGGCAATACTGATGGTG
AACGTAATGTTTGGTCGCATGTTGAAGGTGGCATGGGTTCAGTATCATCAGCTATAAGTA
AGGCTGCTAGGGAGGTTGGGGCACATATTGTGACAAATGCAGAGGTTTCACAGTTGATGA
TTGAAGACTCTGGTGTTGTAAATGGGGTACTACTGGAGGATGGGACACAGGTGTATTCTT
CTGTTGTTTTGTCAAATGCAACCCCTTATAAGACTTTCATGGAATTAGTGCCTCAAAATG
TTCTTCCAGATGATTTTTTCCATGCTATTAAGAACATTGACTACAAATCTGGAACCACAA
AAATTAATGTAGCTGTTGATAAATTGCCTGAGTTCCAGTGTTACAAGTTCAACCATCCAG
AAGCAGGTCCTCACCATACAGCTACCATTCACATTGGTACTGACAGTATGGAGGAGATTG
GCTTAGCTTGTCAAGATGCTTGGAATGGCCTATCATCACGGAGGCCTGTTATTGAGATGA
CAATTCCTTCTTCATTGGACAAGACTATTTCTCCTCCTGGTAAGCATGTGGTCAGTCTAT
TTACACAATATACACCCTATAATCTCACCGATGGTAGCTGGGAAGATCCTGCATACAGAG
AATCATATGCAAAAAGGTGTTTCAACTTGATTGATGAATATGCCCCTGGCTTTAGCTCAT
CTGTCATTGGTTATGACATGCTGGCACCACCGGATCTTGAGAGGGTGATTGGTCTGACAG
GGGGGAATATTTTTCATGGTGCTATGAGTTTGGATTCTCTTTTCCTGATGCGCCCTGTCA
AAGGATGGTCAGGTTATAGGACTCCAGTGAGAGGGCTGTATTTGTGCGGCAGTGGAACAC
ATCCTGGTGGTGGTGTGATGGGGGCGCCTGGTCGTAACTCTGCGCAAGTCGTCATTCAAG
ATCTTAAAAAATATTACGTATGAGAGTTG