Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g01770.t01
CDS Infomation

cds chromosome:12X:4:18349918:18353490:1 gene:VIT_04s0023g01770 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7SPE0]
Sequence

ATGATACGGGCGGTGATAGTGATGAACACACAGGGCAAGCCCCGCCTCACCAAATTTTAC
GATTACATGCCTCCGGAGAAGCAGCAAGAACTCATTCGGCGCGTCTTTGGAGTCTTATGC
AGTAGAGCTGAGAACGTCAGCAATTTTGTGGAGGCGGATTCGGTTTTTGGTCCGGATACT
CGTCTTGTGTACAAGCACTATGCAACTCTCTATTTTGTCTTTGTATTTGATAGTTCTGAA
AATGAGTTAGCCATGCTTGATTTGATACAAGTTCTGGTGGAAACATTGGACAAGTGCTTC
AAAAATGTATGCGAGCTTGACATAGTGTTCAATTATAGCAAGTTGCATACTATTTTGGAT
GAGATCATTTTTGGCGGTCAAGTGCTAGAAACAAGTTCTGCAGAAGTTATGAAGGCTGTT
GAAGAAATATCAAGGTTGGAAACAGCCTCAAATACTATCACACTTGTCCCTAAGTCCATT
TCTGGTTGGCGAAGTTGA

Peptide Sequence

PEP ID

VIT_04s0023g01770.t01
PEP Infomation

pep chromosome:12X:4:18349918:18353490:1 gene:VIT_04s0023g01770 transcript:VIT_04s0023g01770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7SPE0]
Sequence

MIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDT
RLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLDKCFKNVCELDIVFNYSKLHTILD
EIIFGGQVLETSSAEVMKAVEEISRLETASNTITLVPKSISGWRS

Transcript Sequence

Transcript ID

VIT_04s0023g01770.t01
Transcript Infomation

cdna chromosome:12X:4:18349918:18353490:1 gene:VIT_04s0023g01770 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7SPE0]
Sequence

AGGCAGAGGAGGAGTGGGGTACGTAGCAAGAGGGGATAGCGAGGAAGACATGATACGGGC
GGTGATAGTGATGAACACACAGGGCAAGCCCCGCCTCACCAAATTTTACGATTACATGCC
TCCGGAGAAGCAGCAAGAACTCATTCGGCGCGTCTTTGGAGTCTTATGCAGTAGAGCTGA
GAACGTCAGCAATTTTGTGGAGGCGGATTCGGTTTTTGGTCCGGATACTCGTCTTGTGTA
CAAGCACTATGCAACTCTCTATTTTGTCTTTGTATTTGATAGTTCTGAAAATGAGTTAGC
CATGCTTGATTTGATACAAGTTCTGGTGGAAACATTGGACAAGTGCTTCAAAAATGTATG
CGAGCTTGACATAGTGTTCAATTATAGCAAGTTGCATACTATTTTGGATGAGATCATTTT
TGGCGGTCAAGTGCTAGAAACAAGTTCTGCAGAAGTTATGAAGGCTGTTGAAGAAATATC
AAGGTTGGAAACAGCCTCAAATACTATCACACTTGTCCCTAAGTCCATTTCTGGTTGGCG
AAGTTGATAGCATGCATGAATAGAAGTCATTGGATGCTCTAGTGACGGTGGACGTGTTTT
TCATTACCTCGGATAAGTTGATGGCTCATAGATGTGCAGTATGGGTAGTTCCCCTCACAC
CTTTTTAAGTCCAAGAAAATGGTTTATTCGTGAGCGATCAACATTGGTTGCTGGGCTGTT
TACCACCTGGTATGTCTGCGCTTATTGGGTCTGCCTAAGGATGCAAGATTTGAAGAGGTG
AAGGCCAGGGCTATGGCGTGCTCCACCTTTTGTATGTAATAAAGTCCTTGTCAGAATGTT
AGTTTGATTTACCAAGAGAACTGTGAGCATATTCTCAATCATTTCTAGACATCCTTTATT
CCAAGCTCATGTAGGTTGATTAATTTT