Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g01030.t01
CDS Infomation

cds chromosome:12X:4:17449558:17456408:1 gene:VIT_04s0023g01030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTGGCTAACCAAGATTCTAAAAGGCTCTGGCCATAAAATCTCAGAAGGCCAGTAT
CATGGGAGATATGGGGATGACAGAATTTGGGAAGAGCCGTCAACTCCTGTGGATGTATCC
ACAGATTTTGACCATGATGATCTTGCTGTTGCTATGGCTCGTTCCCTTGAAGATTACCCT
GAGGAAGATCAGAAAGGGAAAAAAGTAGTTGATACTGAATCTCAATTGGAGGAAGATGAA
CAACTTGCTAGAGCTCTTCAAGAGAGTTTGAACGTGGAGTCTCCTCCTCGACATGATGCT
GGAAATATATTTCAACCTTTTCCATCATTCTTTTCACCTGGTTATAGGATCTGTGCTGGG
TGCAACTGCGAGATTGGTCATGGAAGATATTTGAGTTGCATGGGTGCTGTTTGGCATCCA
GAATGTTTTCGTTGCCGTGCTTGTGGGCTTCCCATTTTTGAACATGAGTTTTCTATGTCC
GGAAGTCATCCTTATCACAAATCATGCTACAAGGAACAAAATCATCCAAAATGTGATGTT
TGCAGGAACTTTATTCCAACAAATGCAGCTGGACTTATTGAGTATAGAGCACATCCGTTC
TGGATGCAAAAGTACTGTCCCTCACACGAGCATGATGGAACTCCTCGGTGTTGTAGTTGT
GAAAGAATGGAGGCAAGGGACACTAGATATCTATCACTTGATGATGGTAGGAAACTATGT
CTGGAGTGTCTGGACTCTGCTATCATGGAAACTGTAGAGTGCCAGCCTCTTTACCTTGAA
ATACAAGAATTTTATGAGGGTTTGAATATGAAAGTGGAGCAGCAAGTCCCTCTTCTCTTG
GTTGAGAGACAAGCACTAAATGAGGCCATGGAGGGAGAAAAGAATGGACATCATCACTTG
CCTGAGACTAGAGGACTCTGCCTGTCCGAAGAACAGACTGTTAGCACTATTTCGGGGAGG
CCTAGGATTGGCACAGGCTATCGGATTATAGACATGATGACAGAACCTTATAGGCTAATC
CGTCGATGTGAAGTGACAGCAATTCTCATTTTGTATGGGCTCCCAAGGTTGCTGACTGGG
TCGATCCTGGCTCACGAGATGATGCATGCATGGCTCCGACTGAAAGGATATCCAAATCTG
AGTCAGGATGTTGAAGAAGGCATCTGCCAGGTGTTGGCTTATATGTGGTTGGATTCAGAG
ATATATTCAAGTGCTGGTAGTGATGTTGCTTCGGCTTCTTCTTCTTCTTCATCATCATCA
TCATCATCATCCTCATCCACAACATCAAAGAAGGGTGCACGGTCTCAGTTTGAGAAGAAA
CTTGGTGAGTTTTTCAAACACCAGATAGAGACGGATAGTTCACCAGCTTATGGGGACGGA
TTTAGAGCAGGTAACCAAGCAGTGCAGAAGTACGGCCTCAAGAGTACCCTTGACCATATT
CGGCTGACAGGAAGCTTTCCTTACTGA

Peptide Sequence

PEP ID

VIT_04s0023g01030.t01
PEP Infomation

pep chromosome:12X:4:17449558:17456408:1 gene:VIT_04s0023g01030 transcript:VIT_04s0023g01030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDWLTKILKGSGHKISEGQYHGRYGDDRIWEEPSTPVDVSTDFDHDDLAVAMARSLEDYP
EEDQKGKKVVDTESQLEEDEQLARALQESLNVESPPRHDAGNIFQPFPSFFSPGYRICAG
CNCEIGHGRYLSCMGAVWHPECFRCRACGLPIFEHEFSMSGSHPYHKSCYKEQNHPKCDV
CRNFIPTNAAGLIEYRAHPFWMQKYCPSHEHDGTPRCCSCERMEARDTRYLSLDDGRKLC
LECLDSAIMETVECQPLYLEIQEFYEGLNMKVEQQVPLLLVERQALNEAMEGEKNGHHHL
PETRGLCLSEEQTVSTISGRPRIGTGYRIIDMMTEPYRLIRRCEVTAILILYGLPRLLTG
SILAHEMMHAWLRLKGYPNLSQDVEEGICQVLAYMWLDSEIYSSAGSDVASASSSSSSSS
SSSSSSTTSKKGARSQFEKKLGEFFKHQIETDSSPAYGDGFRAGNQAVQKYGLKSTLDHI
RLTGSFPY

Transcript Sequence

Transcript ID

VIT_04s0023g01030.t01
Transcript Infomation

cdna chromosome:12X:4:17449558:17456408:1 gene:VIT_04s0023g01030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGGATATGCGTAGGATTCAATTAAGGGTATCAAGGAAAATATCTAGTCTCCTCTTTAAT
CTTTACTTGCTTACTTTGCCTTCAAGCCAATTCTGGGATCGATCAGATTCCATTATGCCT
GCAGATTCTTAATCTGTTTCAGGCAAGATTTTGCCAGCCCACAAGGGAATAAAATTTCTC
ATTATGGATTGGCTAACCAAGATTCTAAAAGGCTCTGGCCATAAAATCTCAGAAGGCCAG
TATCATGGGAGATATGGGGATGACAGAATTTGGGAAGAGCCGTCAACTCCTGTGGATGTA
TCCACAGATTTTGACCATGATGATCTTGCTGTTGCTATGGCTCGTTCCCTTGAAGATTAC
CCTGAGGAAGATCAGAAAGGGAAAAAAGTAGTTGATACTGAATCTCAATTGGAGGAAGAT
GAACAACTTGCTAGAGCTCTTCAAGAGAGTTTGAACGTGGAGTCTCCTCCTCGACATGAT
GCTGGAAATATATTTCAACCTTTTCCATCATTCTTTTCACCTGGTTATAGGATCTGTGCT
GGGTGCAACTGCGAGATTGGTCATGGAAGATATTTGAGTTGCATGGGTGCTGTTTGGCAT
CCAGAATGTTTTCGTTGCCGTGCTTGTGGGCTTCCCATTTTTGAACATGAGTTTTCTATG
TCCGGAAGTCATCCTTATCACAAATCATGCTACAAGGAACAAAATCATCCAAAATGTGAT
GTTTGCAGGAACTTTATTCCAACAAATGCAGCTGGACTTATTGAGTATAGAGCACATCCG
TTCTGGATGCAAAAGTACTGTCCCTCACACGAGCATGATGGAACTCCTCGGTGTTGTAGT
TGTGAAAGAATGGAGGCAAGGGACACTAGATATCTATCACTTGATGATGGTAGGAAACTA
TGTCTGGAGTGTCTGGACTCTGCTATCATGGAAACTGTAGAGTGCCAGCCTCTTTACCTT
GAAATACAAGAATTTTATGAGGGTTTGAATATGAAAGTGGAGCAGCAAGTCCCTCTTCTC
TTGGTTGAGAGACAAGCACTAAATGAGGCCATGGAGGGAGAAAAGAATGGACATCATCAC
TTGCCTGAGACTAGAGGACTCTGCCTGTCCGAAGAACAGACTGTTAGCACTATTTCGGGG
AGGCCTAGGATTGGCACAGGCTATCGGATTATAGACATGATGACAGAACCTTATAGGCTA
ATCCGTCGATGTGAAGTGACAGCAATTCTCATTTTGTATGGGCTCCCAAGGTTGCTGACT
GGGTCGATCCTGGCTCACGAGATGATGCATGCATGGCTCCGACTGAAAGGATATCCAAAT
CTGAGTCAGGATGTTGAAGAAGGCATCTGCCAGGTGTTGGCTTATATGTGGTTGGATTCA
GAGATATATTCAAGTGCTGGTAGTGATGTTGCTTCGGCTTCTTCTTCTTCTTCATCATCA
TCATCATCATCATCCTCATCCACAACATCAAAGAAGGGTGCACGGTCTCAGTTTGAGAAG
AAACTTGGTGAGTTTTTCAAACACCAGATAGAGACGGATAGTTCACCAGCTTATGGGGAC
GGATTTAGAGCAGGTAACCAAGCAGTGCAGAAGTACGGCCTCAAGAGTACCCTTGACCAT
ATTCGGCTGACAGGAAGCTTTCCTTACTGAGAGCTGACCAATAACTCAGCCCTATCATCT
TTTAGTTTTACAGGACCTAGACCCAACATGAATTATGAACATCACAAGAATAAGTAAGCA
GCTAAATGCCGCTTCTCATGCGCAATTGCTGTAATTCCCCAATAGTGGGCGCCACATATT
TTACTATTTTGCCTAATAATTAATAACATATAGGGAAAAAAAAGAAGTTAGAATTGCTTA
TGAC