Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g01000.t01
CDS Infomation

cds chromosome:12X:4:17421368:17424840:1 gene:VIT_04s0023g01000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGAAATTAGACTTACCAAGGTAGAACAGGGTCAAACCAAAATCAGAAATGTTCCA
ATTGCTGTGACCCCGGAAGGTTTTTGGTGTTGCCCCTCGCCTGTTGTTTTCCAAAAGACT
CTCAAAGCTCAAAACCCTCTAAACAAACCCAAATCCTCACCCCCACCACCCACCAAGACC
TCTGTTCAGAAGAAGCAGGCCCCAATGACTGAGAGAAAACCGACTTCCACTCCATCAAGG
CCAGGAGTTGTTTCTGATGATCAAAGAACTTTTGCTTCTGATGCCCCTGCTCTAAGTGCA
TTGGTTAATGAGAGGGCCCCAAGGCCCAAGATCGAAAATTTACCTAGGAAGGTGGCAATC
GAGTTTGGTGAACCTGGAACCAGTGATATGAAAGTGATCTTAATGGGAAAGCAGGGGTTT
TATGTGAAGTTGAGTGTTCACAAGAACGTTCTCATGGAAAATAGCAGTTTTTTTGCAGAC
AAACTTTCTGAAGAACAGTCTAATTTGTCCTGTCTTGAAATCGAGGATTGTGAAGACATT
GAAATTTATGTTGAAACGGTGGGATTGATGTATTGTAAAGAAACCAAGCAACGGTTGATC
AAACAAAGTGTCTCACGGGTACTTCGTATTCTCAAGGTTGCAGAGCTACTTGGCTTCAAC
TCATGCATGCAATCATGTTTGGAGTATTTAGAGGCAGTCCCTTGGGTTGGTGAAGAAGAA
GAAGAAAAGGTGGTTTCTTCGGTTCTGCAACTCCAGGTAGAGGGTATTGGGGTCACCCCA
GTACTGAAACGAGTCTCTTCTGAAGTCAGTAACTGCCCGAAGGACACACTCTTCCACATA
ATGGAACTGGTTCTAAAGAGTAGTGAGGAGAGAGGCCGACGTGAGATGAAATCTATAGTC
CTGAAGCTCCTTCGAGAAAATAGCAGTGTCCCCAGCTATGCGGGTTCAGCTGACATCTGC
AATGAAACTATTTATAGCTCATGCAGAAGCTGCTTGGATTCATTATTATCTATGTTCAGG
CAAGCTGCTGAACCAGGGTTTACTGATAAACCCATGGAAAACAAAGAACCTGTGTTGAAG
CAGATAACTTTGGAGGCTGATAACCTCTCATGGTTACTTGAAATTTTAGCTGACAGGCAA
GCAGCAGATGAGTTTGCAGTGATGTGGGCTAGCCAGCAAGAGTTAGCAACCCTACATACA
AAGCTTCCTGTTGTCTCTCGCCACCATGTTAGCTGCATTACGGCAAGGCTATTTGTTGGA
ATAGGAAGGGGGGAGCTGCTACCGTCAAAAGACACCCGTCAGTTGTTGTTACAGACCTGG
TTGCAGCCTTTGATCAATGACTACAGCTGGTTACAACATGGGTGTAGGTCATTTGACAGG
AAGGTTGTAGAGGAAGGAATTGGTAGGACAATCCTGACACTGCCTCTAGAGGATCAGCAG
AGTATTTTGCTTGCTTGGTTGGGCAGTTTTCTAAAGGCTGGTGATAACTGCCCAAATCTT
CAGAGGGCCTTTGAGGTCTGGTGGCGGAGAACTTTCGTTAGACCTTATGTTGAACCCCAA
GGAAATCTAATGTAG

Peptide Sequence

PEP ID

VIT_04s0023g01000.t01
PEP Infomation

pep chromosome:12X:4:17421368:17424840:1 gene:VIT_04s0023g01000 transcript:VIT_04s0023g01000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEIRLTKVEQGQTKIRNVPIAVTPEGFWCCPSPVVFQKTLKAQNPLNKPKSSPPPPTKT
SVQKKQAPMTERKPTSTPSRPGVVSDDQRTFASDAPALSALVNERAPRPKIENLPRKVAI
EFGEPGTSDMKVILMGKQGFYVKLSVHKNVLMENSSFFADKLSEEQSNLSCLEIEDCEDI
EIYVETVGLMYCKETKQRLIKQSVSRVLRILKVAELLGFNSCMQSCLEYLEAVPWVGEEE
EEKVVSSVLQLQVEGIGVTPVLKRVSSEVSNCPKDTLFHIMELVLKSSEERGRREMKSIV
LKLLRENSSVPSYAGSADICNETIYSSCRSCLDSLLSMFRQAAEPGFTDKPMENKEPVLK
QITLEADNLSWLLEILADRQAADEFAVMWASQQELATLHTKLPVVSRHHVSCITARLFVG
IGRGELLPSKDTRQLLLQTWLQPLINDYSWLQHGCRSFDRKVVEEGIGRTILTLPLEDQQ
SILLAWLGSFLKAGDNCPNLQRAFEVWWRRTFVRPYVEPQGNLM

Transcript Sequence

Transcript ID

VIT_04s0023g01000.t01
Transcript Infomation

cdna chromosome:12X:4:17421368:17424840:1 gene:VIT_04s0023g01000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTATGCTATAAATTCTTGTTAAATATGGCTGAAATTAGACTTACCAAGGTAGAACAGG
GTCAAACCAAAATCAGAAATGTTCCAATTGCTGTGACCCCGGAAGGTTTTTGGTGTTGCC
CCTCGCCTGTTGTTTTCCAAAAGACTCTCAAAGCTCAAAACCCTCTAAACAAACCCAAAT
CCTCACCCCCACCACCCACCAAGACCTCTGTTCAGAAGAAGCAGGCCCCAATGACTGAGA
GAAAACCGACTTCCACTCCATCAAGGCCAGGAGTTGTTTCTGATGATCAAAGAACTTTTG
CTTCTGATGCCCCTGCTCTAAGTGCATTGGTTAATGAGAGGGCCCCAAGGCCCAAGATCG
AAAATTTACCTAGGAAGGTGGCAATCGAGTTTGGTGAACCTGGAACCAGTGATATGAAAG
TGATCTTAATGGGAAAGCAGGGGTTTTATGTGAAGTTGAGTGTTCACAAGAACGTTCTCA
TGGAAAATAGCAGTTTTTTTGCAGACAAACTTTCTGAAGAACAGTCTAATTTGTCCTGTC
TTGAAATCGAGGATTGTGAAGACATTGAAATTTATGTTGAAACGGTGGGATTGATGTATT
GTAAAGAAACCAAGCAACGGTTGATCAAACAAAGTGTCTCACGGGTACTTCGTATTCTCA
AGGTTGCAGAGCTACTTGGCTTCAACTCATGCATGCAATCATGTTTGGAGTATTTAGAGG
CAGTCCCTTGGGTTGGTGAAGAAGAAGAAGAAAAGGTGGTTTCTTCGGTTCTGCAACTCC
AGGTAGAGGGTATTGGGGTCACCCCAGTACTGAAACGAGTCTCTTCTGAAGTCAGTAACT
GCCCGAAGGACACACTCTTCCACATAATGGAACTGGTTCTAAAGAGTAGTGAGGAGAGAG
GCCGACGTGAGATGAAATCTATAGTCCTGAAGCTCCTTCGAGAAAATAGCAGTGTCCCCA
GCTATGCGGGTTCAGCTGACATCTGCAATGAAACTATTTATAGCTCATGCAGAAGCTGCT
TGGATTCATTATTATCTATGTTCAGGCAAGCTGCTGAACCAGGGTTTACTGATAAACCCA
TGGAAAACAAAGAACCTGTGTTGAAGCAGATAACTTTGGAGGCTGATAACCTCTCATGGT
TACTTGAAATTTTAGCTGACAGGCAAGCAGCAGATGAGTTTGCAGTGATGTGGGCTAGCC
AGCAAGAGTTAGCAACCCTACATACAAAGCTTCCTGTTGTCTCTCGCCACCATGTTAGCT
GCATTACGGCAAGGCTATTTGTTGGAATAGGAAGGGGGGAGCTGCTACCGTCAAAAGACA
CCCGTCAGTTGTTGTTACAGACCTGGTTGCAGCCTTTGATCAATGACTACAGCTGGTTAC
AACATGGGTGTAGGTCATTTGACAGGAAGGTTGTAGAGGAAGGAATTGGTAGGACAATCC
TGACACTGCCTCTAGAGGATCAGCAGAGTATTTTGCTTGCTTGGTTGGGCAGTTTTCTAA
AGGCTGGTGATAACTGCCCAAATCTTCAGAGGGCCTTTGAGGTCTGGTGGCGGAGAACTT
TCGTTAGACCTTATGTTGAACCCCAAGGAAATCTAATGTAG