Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g00590.t01
CDS Infomation

cds chromosome:12X:4:16788083:16797020:-1 gene:VIT_04s0023g00590 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:F6GX20]
Sequence

ATGAAAAGAAAAGAGAAGTCGCAGCCAAAAAACGACACCCGTTTCATCTCCGACAGTCTA
CAGTTGGAGAGTTCGCCGGAAGGTACTTGGAATAGAATGGCATTGGTCACAACCGCTGAA
GTTTGTGATGCAAACCCACAGCTAATTGTTAGTGGAGAGCTCCGGGCACTGCAGCCCGTG
TTCCAGATTTATGGTCGGCGCCCAGTCTTCTCTGGACCAATTGTTACCCTCAAAGTCTTT
GAAGATAATGTCTTGATCCGCGAGTTTCTTGAGGAGAAAGGTAATGGCAGAGTTCTTGTT
GTTGATGGGGGTGGAAGCATGCGGTGTGCAATTCTGGGGGGCAATCCTGTGGTGCAAGCT
CAGAATAATGGATGGGCAGGTATAGTGGTCAATGGCTGTATACGGGATGTTGATGAGATC
AATGGTTGTGATATTGGGGTAAGAGCTCTGAACTCCCACCCAATGAAAGCCAATAAGAAG
GGGATTGGGGAGAAACATGTACCAATAGCCATTGCTGGGACAAGAATCTCCGATGGGGAA
TGGCTTTATGCAGATACTGATGGAATTCTGATTTCCCGAACTGAGTTATCTGTCTAA

Peptide Sequence

PEP ID

VIT_04s0023g00590.t01
PEP Infomation

pep chromosome:12X:4:16788083:16797020:-1 gene:VIT_04s0023g00590 transcript:VIT_04s0023g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:F6GX20]
Sequence

MKRKEKSQPKNDTRFISDSLQLESSPEGTWNRMALVTTAEVCDANPQLIVSGELRALQPV
FQIYGRRPVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSMRCAILGGNPVVQA
QNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPMKANKKGIGEKHVPIAIAGTRISDGE
WLYADTDGILISRTELSV

Transcript Sequence

Transcript ID

VIT_04s0023g00590.t01
Transcript Infomation

cdna chromosome:12X:4:16788083:16797020:-1 gene:VIT_04s0023g00590 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-hydroxy-4-methyl-2-oxoglutarate aldolase [Source:UniProtKB/TrEMBL;Acc:F6GX20]
Sequence

ATGAAAAGAAAAGAGAAGTCGCAGCCAAAAAACGACACCCGTTTCATCTCCGACAGTCTA
CAGTTGGAGAGTTCGCCGGAAGGTACTTGGAATAGAATGGCATTGGTCACAACCGCTGAA
GTTTGTGATGCAAACCCACAGCTAATTGTTAGTGGAGAGCTCCGGGCACTGCAGCCCGTG
TTCCAGATTTATGGTCGGCGCCCAGTCTTCTCTGGACCAATTGTTACCCTCAAAGTCTTT
GAAGATAATGTCTTGATCCGCGAGTTTCTTGAGGAGAAAGGTAATGGCAGAGTTCTTGTT
GTTGATGGGGGTGGAAGCATGCGGTGTGCAATTCTGGGGGGCAATCCTGTGGTGCAAGCT
CAGAATAATGGATGGGCAGGTATAGTGGTCAATGGCTGTATACGGGATGTTGATGAGATC
AATGGTTGTGATATTGGGGTAAGAGCTCTGAACTCCCACCCAATGAAAGCCAATAAGAAG
GGGATTGGGGAGAAACATGTACCAATAGCCATTGCTGGGACAAGAATCTCCGATGGGGAA
TGGCTTTATGCAGATACTGATGGAATTCTGATTTCCCGAACTGAGTTATCTGTCTAAGCG
TCCTTTCCTCTGAGACCAGTACTTGCATGAAGCTATTTCTGGGAAGTAAGTTTTATTGTA
TTGCTTTGTTGGTAAATTTGTGTTCTTAAGCTCACTTCAGAGCCTTGATGTTTGTACTAT
TCTCCAAATATGTGATAATGGAAGTATGCTGTTCTGTC