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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g00450.t01
CDS Infomation

cds chromosome:12X:4:16649310:16652953:-1 gene:VIT_04s0023g00450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:D7SPR0]
Sequence

ATGATTGAATGGGGAGATGTTTACAAGGTGGTGGAAGCCATGGCACCACTCTACGTTGCA
CTGCTGCTGGGCTACGCCTCCGTGAGGTGGTGGCACATGTTCAGCTCCGATCAATGCGCC
GCCATCAACCGCTTCATCTGCTACTTCATTTTCCCATTCTACAGCTTTGATTTCACCTCC
CATATCGACCCTTTCTCCATGAATTACAAGTACATGGGGGCCGATATCATGAGCAAGTTC
ATCTGTGTTGCTGCGCTTGGCCTCTGGTGCAAGTGCAGTAGCAGAACCGGCAGCTATGGC
TGGTTCGTCACCTGCTTCAGTCTCTGCACAATGACTAATTCTCTCTTTATCGGGGTGCCC
ATTTTAGAGGCCATGTATGGCCGGACGGGGGTCAATCTCGTCCTCCAGGCTTCCGTCGTC
CAAGTCATTATCTATAGCACCGTCTTCTTGATTCTCTTGGAGTTCTGGAAATCTTTCGTT
TCTTTAAACAAAACAATTCCTGAGGACTCTAATATTGCACCGGTGGGGGCTGCAGAGGAA
GATTTGGAAGGGCATAGGACGACGGAGGTGTCGGAAAGCTCGGGGCCGTCGTCTTTCTGG
CCACTGATGAGGAACGCGTTGCTGAAACTCGTGAAGAACCCAAACATTTATGCCTGTGTT
CTTGGCCTCATTTGGGCTTTTCTATCAAAGCGGTGGCATATTGGAATGCCAAAAATTGTG
GAGGGATCCGTACAAATCATGTCAAGAGCTGGGACATCCACTGCCATGTTTAGTCTTGGG
TTCTTCATGGCAATGCAAGGAAAGGTGATGGCATGTGGAGCGACTCTGACTGCGTTTGGG
ATGATTATAAGGTTCATTGCTACACCGGTGACCATGGGGGTGGTCGCCTTGGCAATTGGC
TTGCGTGGCAATGTTTTGCGCATCGCCATAATCCAGGCTGCATTGCCACAATCACTTGCT
TCATTCGTCTTCGTCAAGGAATATGGCTTGCATACAGAAGTGATTAGCACTGCGGTGATC
CTTGGAATTATAATTTGTCTTCCCTTGTTGGTTGCATATTACGCGATTTTGGTATACATA
AGATGA

Peptide Sequence

PEP ID

VIT_04s0023g00450.t01
PEP Infomation

pep chromosome:12X:4:16649310:16652953:-1 gene:VIT_04s0023g00450 transcript:VIT_04s0023g00450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:D7SPR0]
Sequence

MIEWGDVYKVVEAMAPLYVALLLGYASVRWWHMFSSDQCAAINRFICYFIFPFYSFDFTS
HIDPFSMNYKYMGADIMSKFICVAALGLWCKCSSRTGSYGWFVTCFSLCTMTNSLFIGVP
ILEAMYGRTGVNLVLQASVVQVIIYSTVFLILLEFWKSFVSLNKTIPEDSNIAPVGAAEE
DLEGHRTTEVSESSGPSSFWPLMRNALLKLVKNPNIYACVLGLIWAFLSKRWHIGMPKIV
EGSVQIMSRAGTSTAMFSLGFFMAMQGKVMACGATLTAFGMIIRFIATPVTMGVVALAIG
LRGNVLRIAIIQAALPQSLASFVFVKEYGLHTEVISTAVILGIIICLPLLVAYYAILVYI
R

Transcript Sequence

Transcript ID

VIT_04s0023g00450.t01
Transcript Infomation

cdna chromosome:12X:4:16649310:16652953:-1 gene:VIT_04s0023g00450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:D7SPR0]
Sequence

AGAAAGAAAGATGATTGAATGGGGAGATGTTTACAAGGTGGTGGAAGCCATGGCACCACT
CTACGTTGCACTGCTGCTGGGCTACGCCTCCGTGAGGTGGTGGCACATGTTCAGCTCCGA
TCAATGCGCCGCCATCAACCGCTTCATCTGCTACTTCATTTTCCCATTCTACAGCTTTGA
TTTCACCTCCCATATCGACCCTTTCTCCATGAATTACAAGTACATGGGGGCCGATATCAT
GAGCAAGTTCATCTGTGTTGCTGCGCTTGGCCTCTGGTGCAAGTGCAGTAGCAGAACCGG
CAGCTATGGCTGGTTCGTCACCTGCTTCAGTCTCTGCACAATGACTAATTCTCTCTTTAT
CGGGGTGCCCATTTTAGAGGCCATGTATGGCCGGACGGGGGTCAATCTCGTCCTCCAGGC
TTCCGTCGTCCAAGTCATTATCTATAGCACCGTCTTCTTGATTCTCTTGGAGTTCTGGAA
ATCTTTCGTTTCTTTAAACAAAACAATTCCTGAGGACTCTAATATTGCACCGGTGGGGGC
TGCAGAGGAAGATTTGGAAGGGCATAGGACGACGGAGGTGTCGGAAAGCTCGGGGCCGTC
GTCTTTCTGGCCACTGATGAGGAACGCGTTGCTGAAACTCGTGAAGAACCCAAACATTTA
TGCCTGTGTTCTTGGCCTCATTTGGGCTTTTCTATCAAAGCGGTGGCATATTGGAATGCC
AAAAATTGTGGAGGGATCCGTACAAATCATGTCAAGAGCTGGGACATCCACTGCCATGTT
TAGTCTTGGGTTCTTCATGGCAATGCAAGGAAAGGTGATGGCATGTGGAGCGACTCTGAC
TGCGTTTGGGATGATTATAAGGTTCATTGCTACACCGGTGACCATGGGGGTGGTCGCCTT
GGCAATTGGCTTGCGTGGCAATGTTTTGCGCATCGCCATAATCCAGGCTGCATTGCCACA
ATCACTTGCTTCATTCGTCTTCGTCAAGGAATATGGCTTGCATACAGAAGTGATTAGCAC
TGCGGTGATCCTTGGAATTATAATTTGTCTTCCCTTGTTGGTTGCATATTACGCGATTTT
GGTATACATAAGATGA