Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0023g00150.t01
CDS Infomation

cds chromosome:12X:4:16186675:16227869:1 gene:VIT_04s0023g00150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACCTCGGAGAAGCTCCTCACACACCTCCGACGACGACGTTTCCGTGAAATCTCC
TCTCTTTCTAACTCGCTCTCCTTTGCCGTCCCTCCTCCAATCTCACATCGCAGCCTCATA
AACCCTAATTCTCACTATCAGCTTCACCATCATGGCTTGTTTAAATCCAGACATAATCTT
TATTTTCCGTCAAATCTCATCTCACTTGCGCCATTCAGCTTCTCTCACTCGCGGTCCTTC
TCCAGCGGTGATTCGGACTACGTGGGAACGGACGTTGCTGTCGAGTCGGCCATTGAGTCG
ATTCCTCCAGTTCGTTTTCTGGTTTCATTGCTGGATGGATACCATGATGTTACTGGATGG
CCTTGGTGGATAATAATTGCTTCCTCTACTTTGGCTCTCAGAATTGCACTATTCCCCATT
TTGGTGCTGCAACTTAAGAAAATGAAAAGGATTGCAGAGTTGTTACCTAAATTGCCTCCT
CCACTGCCACCACCCCTCTCAGGAAGAAGTTATTTTGACCAAATTTCACTTTTTCGTAAG
GAAAAACGAGCAATTGGCTGCCCTTCATTTTTATGGTTCCTTGCATCCTTATCCACCCAG
GTGCCATGCTTTATCTTGTGGATGATGAGCATTCGATGGATGTCATTGGATCATCATCCT
GGCTTTGATTCTGGTGGTGCTCTGTGGTTTCAAAATTTGACTGAATTTCCAAATGGTGTT
TTGGGACCCATCTTTCCAATACTGATTTCTGGTTTGCATTTCATAAATGTTCAGATTTCT
TTTAGCACCTCTTCAGTTGGACAAGTACCTGGACTTCTTGGTTTATTAGCCAAATACTAC
AAATTCTATTTGGAGATTTTGACGGTACCTATATTCTTTACTGGGTTCTATATTCCCCAG
GGCAGTTTAGTCTATTGGGTCACCAACAGTTCATTATCTGCCATTCAGCAATTAACTATC
AGGCATCCCACTGTTCGTGCAAAGCTGGGATTACCAGATAAGCAAGCTCCAAATGCAGCT
GCAAAAGAAATGCATACACCTGGAGAAGGATCATTAGGTCCACCAACAAAGCAGCAATAC
ATTTCTCCAGAAAGTGTATCCCCTCAAGAACTGCCTGGAATCAAATCAATGTATCCTCGA
AGGAAGCAGCATCAAATTCCCATTGAAAGCCTGTCCCCTCGAGATCTGATTGCTCTTTCA
GTTCAAATTTTATCTAAAGGAGATAAAGATGGAGCAATTCCATTCATACGCATGGCACTT
GACAAGGATCCCAATTATGTAAGAGCTTTGGTTGTCATGGGGCAGACTCTATTGCAAAAG
GAACAAGTGGAAGAGGCCAGTGATTACTTAGAGCGTGCTGTTACCAAGCTCTTTCTCATC
GGCCATCCAACAGAAGATGAGGTTGATCTTATGATTCTTGCATCTCAATGGGCTGGTGCT
GCTTGTGTAAGACAGGGAAAAACTGCAGAAGGACTAGTACACCTAGAACGAATAGCAAAT
TTGAAAGAGCCAGATGAACCAAAGAGCAAAGCCCACTACTTTGACGGGTTGCTATTGCTT
GCAAGTACTTTATATCGTGAAGGTCGTAACGCAGAAGCAGCAAAGCATCTGCGCAAGGCA
GCTGCTTACAACCCAGCCTACAAGGAGTATTTGGAAGAATGTGAGAGAGAAGACGGCTTT
GTGAATGATCTGGTCAGCAGCAGAAGAGGAGATTACTGA

Peptide Sequence

PEP ID

VIT_04s0023g00150.t01
PEP Infomation

pep chromosome:12X:4:16186675:16227869:1 gene:VIT_04s0023g00150 transcript:VIT_04s0023g00150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATSEKLLTHLRRRRFREISSLSNSLSFAVPPPISHRSLINPNSHYQLHHHGLFKSRHNL
YFPSNLISLAPFSFSHSRSFSSGDSDYVGTDVAVESAIESIPPVRFLVSLLDGYHDVTGW
PWWIIIASSTLALRIALFPILVLQLKKMKRIAELLPKLPPPLPPPLSGRSYFDQISLFRK
EKRAIGCPSFLWFLASLSTQVPCFILWMMSIRWMSLDHHPGFDSGGALWFQNLTEFPNGV
LGPIFPILISGLHFINVQISFSTSSVGQVPGLLGLLAKYYKFYLEILTVPIFFTGFYIPQ
GSLVYWVTNSSLSAIQQLTIRHPTVRAKLGLPDKQAPNAAAKEMHTPGEGSLGPPTKQQY
ISPESVSPQELPGIKSMYPRRKQHQIPIESLSPRDLIALSVQILSKGDKDGAIPFIRMAL
DKDPNYVRALVVMGQTLLQKEQVEEASDYLERAVTKLFLIGHPTEDEVDLMILASQWAGA
ACVRQGKTAEGLVHLERIANLKEPDEPKSKAHYFDGLLLLASTLYREGRNAEAAKHLRKA
AAYNPAYKEYLEECEREDGFVNDLVSSRRGDY

Transcript Sequence

Transcript ID

VIT_04s0023g00150.t01
Transcript Infomation

cdna chromosome:12X:4:16186675:16227869:1 gene:VIT_04s0023g00150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCACCACCGCCACCATCGGCAATGGCCACCTCGGAGAAGCTCCTCACACACCTCCGACGA
CGACGTTTCCGTGAAATCTCCTCTCTTTCTAACTCGCTCTCCTTTGCCGTCCCTCCTCCA
ATCTCACATCGCAGCCTCATAAACCCTAATTCTCACTATCAGCTTCACCATCATGGCTTG
TTTAAATCCAGACATAATCTTTATTTTCCGTCAAATCTCATCTCACTTGCGCCATTCAGC
TTCTCTCACTCGCGGTCCTTCTCCAGCGGTGATTCGGACTACGTGGGAACGGACGTTGCT
GTCGAGTCGGCCATTGAGTCGATTCCTCCAGTTCGTTTTCTGGTTTCATTGCTGGATGGA
TACCATGATGTTACTGGATGGCCTTGGTGGATAATAATTGCTTCCTCTACTTTGGCTCTC
AGAATTGCACTATTCCCCATTTTGGTGCTGCAACTTAAGAAAATGAAAAGGATTGCAGAG
TTGTTACCTAAATTGCCTCCTCCACTGCCACCACCCCTCTCAGGAAGAAGTTATTTTGAC
CAAATTTCACTTTTTCGTAAGGAAAAACGAGCAATTGGCTGCCCTTCATTTTTATGGTTC
CTTGCATCCTTATCCACCCAGGTGCCATGCTTTATCTTGTGGATGATGAGCATTCGATGG
ATGTCATTGGATCATCATCCTGGCTTTGATTCTGGTGGTGCTCTGTGGTTTCAAAATTTG
ACTGAATTTCCAAATGGTGTTTTGGGACCCATCTTTCCAATACTGATTTCTGGTTTGCAT
TTCATAAATGTTCAGATTTCTTTTAGCACCTCTTCAGTTGGACAAGTACCTGGACTTCTT
GGTTTATTAGCCAAATACTACAAATTCTATTTGGAGATTTTGACGGTACCTATATTCTTT
ACTGGGTTCTATATTCCCCAGGGCAGTTTAGTCTATTGGGTCACCAACAGTTCATTATCT
GCCATTCAGCAATTAACTATCAGGCATCCCACTGTTCGTGCAAAGCTGGGATTACCAGAT
AAGCAAGCTCCAAATGCAGCTGCAAAAGAAATGCATACACCTGGAGAAGGATCATTAGGT
CCACCAACAAAGCAGCAATACATTTCTCCAGAAAGTGTATCCCCTCAAGAACTGCCTGGA
ATCAAATCAATGTATCCTCGAAGGAAGCAGCATCAAATTCCCATTGAAAGCCTGTCCCCT
CGAGATCTGATTGCTCTTTCAGTTCAAATTTTATCTAAAGGAGATAAAGATGGAGCAATT
CCATTCATACGCATGGCACTTGACAAGGATCCCAATTATGTAAGAGCTTTGGTTGTCATG
GGGCAGACTCTATTGCAAAAGGAACAAGTGGAAGAGGCCAGTGATTACTTAGAGCGTGCT
GTTACCAAGCTCTTTCTCATCGGCCATCCAACAGAAGATGAGGTTGATCTTATGATTCTT
GCATCTCAATGGGCTGGTGCTGCTTGTGTAAGACAGGGAAAAACTGCAGAAGGACTAGTA
CACCTAGAACGAATAGCAAATTTGAAAGAGCCAGATGAACCAAAGAGCAAAGCCCACTAC
TTTGACGGGTTGCTATTGCTTGCAAGTACTTTATATCGTGAAGGTCGTAACGCAGAAGCA
GCAAAGCATCTGCGCAAGGCAGCTGCTTACAACCCAGCCTACAAGGAGTATTTGGAAGAA
TGTGAGAGAGAAGACGGCTTTGTGAATGATCTGGTCAGCAGCAGAAGAGGAGATTACTGA