Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g07340.t01
CDS Infomation

cds chromosome:12X:4:7669706:7671321:-1 gene:VIT_04s0008g07340 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONSTANS-like protein 4 [Source:UniProtKB/TrEMBL;Acc:F6H3L9]
Sequence

ATGGTTGTTGAAGTGGAAAGTTGGAGGATGGCGTCCAAGCTCTGCGACTCCTGTAAATCG
GCCCCGCCCACTCTCTTCTGCCGTGCCGACTCCGCCTTTCTGTGCGTGGCCTGTGACTCC
AAGGTCCATGCGGCCAACAAGCTCGCCTCTCGCCACGCGCGGGTGTGGATGTGCGAGGTC
TGCGAGCAGGCTCCTGCCCATGTCACGTGCAAGGCCGACGCCGCCGCTCTCTGCGTCACA
TGCGACCGCGATATCCACTCCGCCAACCCTCTCGCTCGCCGCCACGAGCGAGTTCCGGTG
GTGCCGTTCTACGACTCTGCCGCCGCTGCTGCTAAGTCCAACGCCGTCAACCTTCTAGTT
GACGACCGTTATTACTCCGATCCCGACGGCGATGCTAGCCGCGAAGAGGCCGAGGCCGCT
TCCTGGTTGCTCCCGAACCCAAACCCTAAGCTCGCTGAGAGTTCAGATCTGAATTCGAGT
CATTACATGTTCTCTGACATAGATCCGTATCTGGATCTGGATTATCCGTCGATGGATCCA
AAGCTTCAATCGCAGCAGCAGCAGCAAAGTTCGGGAACTGATGGAGTTGTTCCAGTACAG
AACAAGAGTGTTCAAGCTCCATTGGTGAACGACAACTGCTTTGACATGGATTTCTCAGGC
TCCAAGTCCTTCTACAACGGACAATCTCTCAGCCAAAGTGTATCGTCCTCCTCTTTAGAA
GTGGGAGTCGTGCCAGATGGTAACGCCATGGTTGATGTAACAAACCCTTTCGGTAGATCG
ATGAACACCGGATCCGAATCAGCTAATCAAACTGCTCAAATTTCATCAGGAATAGATCGA
GAAGCTAGGGTTTTGAGGTACAGAGAGAAGAGAAAGAACAGAAAGTTTGAGAAAACGATC
CGATACGCATCACGAAAAGCCTACGCCGAAACGAGACCGAGAATCAAGGGAAGGTTCGCG
AAGCGATCGGAGATCGAAGTCGATTACAGCTCGTCTGGAGCACTGACCGCCGACTCAGGA
TACGGCGTCGTTCCATCGTTTTGA

Peptide Sequence

PEP ID

VIT_04s0008g07340.t01
PEP Infomation

pep chromosome:12X:4:7669706:7671321:-1 gene:VIT_04s0008g07340 transcript:VIT_04s0008g07340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONSTANS-like protein 4 [Source:UniProtKB/TrEMBL;Acc:F6H3L9]
Sequence

MVVEVESWRMASKLCDSCKSAPPTLFCRADSAFLCVACDSKVHAANKLASRHARVWMCEV
CEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVVPFYDSAAAAAKSNAVNLLV
DDRYYSDPDGDASREEAEAASWLLPNPNPKLAESSDLNSSHYMFSDIDPYLDLDYPSMDP
KLQSQQQQQSSGTDGVVPVQNKSVQAPLVNDNCFDMDFSGSKSFYNGQSLSQSVSSSSLE
VGVVPDGNAMVDVTNPFGRSMNTGSESANQTAQISSGIDREARVLRYREKRKNRKFEKTI
RYASRKAYAETRPRIKGRFAKRSEIEVDYSSSGALTADSGYGVVPSF

Transcript Sequence

Transcript ID

VIT_04s0008g07340.t01
Transcript Infomation

cdna chromosome:12X:4:7669706:7671321:-1 gene:VIT_04s0008g07340 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONSTANS-like protein 4 [Source:UniProtKB/TrEMBL;Acc:F6H3L9]
Sequence

ATCACAATTATCATTTCAGTGAGACTGCGGAAAATACTGAGAGCACTGTAGTGGAGACAT
GGTTGTTGAAGTGGAAAGTTGGAGGATGGCGTCCAAGCTCTGCGACTCCTGTAAATCGGC
CCCGCCCACTCTCTTCTGCCGTGCCGACTCCGCCTTTCTGTGCGTGGCCTGTGACTCCAA
GGTCCATGCGGCCAACAAGCTCGCCTCTCGCCACGCGCGGGTGTGGATGTGCGAGGTCTG
CGAGCAGGCTCCTGCCCATGTCACGTGCAAGGCCGACGCCGCCGCTCTCTGCGTCACATG
CGACCGCGATATCCACTCCGCCAACCCTCTCGCTCGCCGCCACGAGCGAGTTCCGGTGGT
GCCGTTCTACGACTCTGCCGCCGCTGCTGCTAAGTCCAACGCCGTCAACCTTCTAGTTGA
CGACCGTTATTACTCCGATCCCGACGGCGATGCTAGCCGCGAAGAGGCCGAGGCCGCTTC
CTGGTTGCTCCCGAACCCAAACCCTAAGCTCGCTGAGAGTTCAGATCTGAATTCGAGTCA
TTACATGTTCTCTGACATAGATCCGTATCTGGATCTGGATTATCCGTCGATGGATCCAAA
GCTTCAATCGCAGCAGCAGCAGCAAAGTTCGGGAACTGATGGAGTTGTTCCAGTACAGAA
CAAGAGTGTTCAAGCTCCATTGGTGAACGACAACTGCTTTGACATGGATTTCTCAGGCTC
CAAGTCCTTCTACAACGGACAATCTCTCAGCCAAAGTGTATCGTCCTCCTCTTTAGAAGT
GGGAGTCGTGCCAGATGGTAACGCCATGGTTGATGTAACAAACCCTTTCGGTAGATCGAT
GAACACCGGATCCGAATCAGCTAATCAAACTGCTCAAATTTCATCAGGAATAGATCGAGA
AGCTAGGGTTTTGAGGTACAGAGAGAAGAGAAAGAACAGAAAGTTTGAGAAAACGATCCG
ATACGCATCACGAAAAGCCTACGCCGAAACGAGACCGAGAATCAAGGGAAGGTTCGCGAA
GCGATCGGAGATCGAAGTCGATTACAGCTCGTCTGGAGCACTGACCGCCGACTCAGGATA
CGGCGTCGTTCCATCGTTTTGATGGGCCATGTACCAATATGCTAATCGCTTTTTATTGTT
GTTATTTCTTCTCGCTCTTCCTTTTTGCAGAGCAATTATGCTGTGTTGTTCTTGTGTACG
AATGTTTTTGTATATACTAAGTGACGATGTTTGATCGACGACATGGTAGCCGTGGATTTG
TTCCAAGTT