Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g06920.t01
CDS Infomation

cds chromosome:12X:4:6948652:6957457:-1 gene:VIT_04s0008g06920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCACCATGCAACCTTCTAGTGTGACCCAAGAACCCAGTAGTGTGTTGGATTTTGAG
TCCAAGTTGGGAGCTGTTGCTCTTGATTCAAGGTTTCACCTCTTGAATTCTGATGGGTAC
GCTTCGTTTCTGTCTAATTACTTGTACTTCGATAGGTCTGGGGGTTTGGTTGGTGAGAAG
GGGCCTAAGTTGGTGGCGTCTTTGAGTTGGAGTAGTCGAGGTGTGTCGAGGGTGAGGAGG
ATTTTCGGTGAGTTCAATAGGGCTGTTAGGTTTCATTGTGAGAAAATCCCAATTGGGTTC
GCTTCGGTTCATGTTAATTCTGGGGATAATAATGGGTTGAGAGGAGATGGGAATGGTGTT
TTGGAGGACGAGGGATTGGTCTTGAATGTTGTGGAGGCTGAGAAACCCAAAAAAGTTCTT
ATTTTGATGAGTGATACTGGTGGTGGTCACCGAGCTTCTGCGGAAGCTATTAAGGCGGCA
TTCAATGAAGAATTCGGGGAGGAGTATCAGGTGTTTGTTACTGACTTATGGTCAGATCAC
ACCCCTTGGCCATTTAATCAATTGCCCAGGAGCTATAACTTCTTGGTGAAACATGGCCCC
CTGTGGAAAATGACCTATTATGGAACTGCTCCACGTTTGGTGCATCAATCAAATTTTGCT
GCAACTACTACATTTATAGCTCGAGAGGTTGCCAAAGGACTTATGAAATACCAACCTGAC
ATTATTATTAGCGTACATCCTCTGATGCAACATGTTCCACTCCGTATTTTGAGGGCAAAG
GGCCTTTTGAAAAAGATCGTCTTCACAACAGTAGTTACAGATTTAAGCACTTGCCATCCT
ACATGGTTTCACAAGCTTGTAACAAGATGCTATTGCCCAACAACTGATGTTGCAAAAAGG
GCATTGAAAGCTGGGCTCCAGTCTTCACAGATTAAGGTTTATGGCCTTCCCGTCCGACCA
TCCTTTGTTAAGCCTGTCCGACCTAAGGATGAATTGAGAAAGGAACTTGGAATGGATGAA
GATCTTCCTGCAGTATTACTTATGGGAGGAGGAGAAGGGATGGGCCCCATTGAGGCTACT
GCTCGTGCCCTTGGAAATGCATTATACAATGAAGATCTTGGGGAGTCAATAGGTCAGGTC
CTTGTGATATGTGGCCGCAATAAAAAGCTAGCTGACAAATTACGCTCAATTCCTTGGAAA
ATTCCTGTCCAGGTGAAGGGGTTTGTCACTAAGATGGAGGAATGCATGGGGGCCTGTGAT
TGCATTATTACAAAGGCGGGCCCAGGAACTATTGCAGAAGCCATGATACGAGGACTTCCT
ATAATTCTCAATGATTACATTGCTGGACAGGAAGTTGGAAATGTGCCATACGTGGTGGAA
AATGGGTGTGGGAAATTTTCAAAGTCGCCAAAGGAGATAGCAAAGATCGTGGGGGAGTGG
TTTGGTCCAAAAGCAGAGGAGCTTGCAGTCATGTCACAGAATGCACTGAAGCTGGCAAGA
CCAGATGCTGTGTTTAAGATAGTTCATGATCTGCATGAGCTGGTTAGGCAGAGAAGTTTT
GTAACCCAGTACTCTTGTACAACTTGA

Peptide Sequence

PEP ID

VIT_04s0008g06920.t01
PEP Infomation

pep chromosome:12X:4:6948652:6957457:-1 gene:VIT_04s0008g06920 transcript:VIT_04s0008g06920.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPTMQPSSVTQEPSSVLDFESKLGAVALDSRFHLLNSDGYASFLSNYLYFDRSGGLVGEK
GPKLVASLSWSSRGVSRVRRIFGEFNRAVRFHCEKIPIGFASVHVNSGDNNGLRGDGNGV
LEDEGLVLNVVEAEKPKKVLILMSDTGGGHRASAEAIKAAFNEEFGEEYQVFVTDLWSDH
TPWPFNQLPRSYNFLVKHGPLWKMTYYGTAPRLVHQSNFAATTTFIAREVAKGLMKYQPD
IIISVHPLMQHVPLRILRAKGLLKKIVFTTVVTDLSTCHPTWFHKLVTRCYCPTTDVAKR
ALKAGLQSSQIKVYGLPVRPSFVKPVRPKDELRKELGMDEDLPAVLLMGGGEGMGPIEAT
ARALGNALYNEDLGESIGQVLVICGRNKKLADKLRSIPWKIPVQVKGFVTKMEECMGACD
CIITKAGPGTIAEAMIRGLPIILNDYIAGQEVGNVPYVVENGCGKFSKSPKEIAKIVGEW
FGPKAEELAVMSQNALKLARPDAVFKIVHDLHELVRQRSFVTQYSCTT

Transcript Sequence

Transcript ID

VIT_04s0008g06920.t01
Transcript Infomation

cdna chromosome:12X:4:6948652:6957457:-1 gene:VIT_04s0008g06920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAAAACCATATTCTCTTGCATTTTGGGTGTTTTTATGGATTGATGGATTAAACTCTTT
CACATATAAAATGCCCACCATGCAACCTTCTAGTGTGACCCAAGAACCCAGTAGTGTGTT
GGATTTTGAGTCCAAGTTGGGAGCTGTTGCTCTTGATTCAAGGTTTCACCTCTTGAATTC
TGATGGGTACGCTTCGTTTCTGTCTAATTACTTGTACTTCGATAGGTCTGGGGGTTTGGT
TGGTGAGAAGGGGCCTAAGTTGGTGGCGTCTTTGAGTTGGAGTAGTCGAGGTGTGTCGAG
GGTGAGGAGGATTTTCGGTGAGTTCAATAGGGCTGTTAGGTTTCATTGTGAGAAAATCCC
AATTGGGTTCGCTTCGGTTCATGTTAATTCTGGGGATAATAATGGGTTGAGAGGAGATGG
GAATGGTGTTTTGGAGGACGAGGGATTGGTCTTGAATGTTGTGGAGGCTGAGAAACCCAA
AAAAGTTCTTATTTTGATGAGTGATACTGGTGGTGGTCACCGAGCTTCTGCGGAAGCTAT
TAAGGCGGCATTCAATGAAGAATTCGGGGAGGAGTATCAGGTGTTTGTTACTGACTTATG
GTCAGATCACACCCCTTGGCCATTTAATCAATTGCCCAGGAGCTATAACTTCTTGGTGAA
ACATGGCCCCCTGTGGAAAATGACCTATTATGGAACTGCTCCACGTTTGGTGCATCAATC
AAATTTTGCTGCAACTACTACATTTATAGCTCGAGAGGTTGCCAAAGGACTTATGAAATA
CCAACCTGACATTATTATTAGCGTACATCCTCTGATGCAACATGTTCCACTCCGTATTTT
GAGGGCAAAGGGCCTTTTGAAAAAGATCGTCTTCACAACAGTAGTTACAGATTTAAGCAC
TTGCCATCCTACATGGTTTCACAAGCTTGTAACAAGATGCTATTGCCCAACAACTGATGT
TGCAAAAAGGGCATTGAAAGCTGGGCTCCAGTCTTCACAGATTAAGGTTTATGGCCTTCC
CGTCCGACCATCCTTTGTTAAGCCTGTCCGACCTAAGGATGAATTGAGAAAGGAACTTGG
AATGGATGAAGATCTTCCTGCAGTATTACTTATGGGAGGAGGAGAAGGGATGGGCCCCAT
TGAGGCTACTGCTCGTGCCCTTGGAAATGCATTATACAATGAAGATCTTGGGGAGTCAAT
AGGTCAGGTCCTTGTGATATGTGGCCGCAATAAAAAGCTAGCTGACAAATTACGCTCAAT
TCCTTGGAAAATTCCTGTCCAGGTGAAGGGGTTTGTCACTAAGATGGAGGAATGCATGGG
GGCCTGTGATTGCATTATTACAAAGGCGGGCCCAGGAACTATTGCAGAAGCCATGATACG
AGGACTTCCTATAATTCTCAATGATTACATTGCTGGACAGGAAGTTGGAAATGTGCCATA
CGTGGTGGAAAATGGGTGTGGGAAATTTTCAAAGTCGCCAAAGGAGATAGCAAAGATCGT
GGGGGAGTGGTTTGGTCCAAAAGCAGAGGAGCTTGCAGTCATGTCACAGAATGCACTGAA
GCTGGCAAGACCAGATGCTGTGTTTAAGATAGTTCATGATCTGCATGAGCTGGTTAGGCA
GAGAAGTTTTGTAACCCAGTACTCTTGTACAACTTGAATTTTGTGTGTAGCCCTCCTTCC
ATTCAAATTTTGTTTCTCAACTCCTCTCTTGTAATGAATAACTGGG