Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g06610.t01
CDS Infomation

cds chromosome:12X:4:6578496:6598764:-1 gene:VIT_04s0008g06610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAAGAGCTAAAGCAGTGTTGTCACCAGCAGTGAGGTGTTCCCTACAGAGATTTGGG
GTTTTCTCTCATCACAGAAGCTTCTCTGCTCTGCCAAATTATGCCCGAAACGATGATCTC
CAAGAGCAGGTGTTAGTGGAAGGGAGGGCAAAGTCAAGGGCAGCCATTCTCAATAGACCA
TCTGATCTCAATGCTCTCACTATTCCAATGGTGGCCCGGCTCAAAAGACTATATGAATCA
TGGGAAGAAAACTCAGATCTTGGATTTGTCATAATGAAGGGTAGTGGCAGGGCCTTATGT
TCTGGTGGAGATGTTGTTGCTCTCAATCAGCTGATTAATGAAGGGAAAGTTGAGGAGTGT
AAAAAGTTTTTTGAGACTTTGTATAAGTTCGTATACCTTCTAGGAACGTATGTGAAGCCA
AATGTGGCTATCGTGGATGGTATTACCATGGGAGGTGGCGCTGGAATTTCCATCCCGGCA
ATGTTTCGTGTGGTAACTGATAAAACGGTTTTTGCCACTCCAGAGACTCAAATGGGATTC
CATCCTGATGCTGGTGCTTCATTCTATCTTTCTCGTCTACCAGGATATTTAGGGGAATAC
TTGGCTCTAACAGGAGAAAAGCTCAATGGTGTAGAAATGATTGCCTGTGGCCTTGCTACA
CACTACTCACTGACTGCAAGACTTCCCTTGATTGAAGAACGTCTTGGTAAATTGATCACG
GATGATCCTTCTGTCATAGAGTCTTCTCTTGAGCAATATGGTGACCTTGTCTACCCAGAT
AAGAGGAGTGTTCTTCATAAGATTGAGACAATTGATAAATGTTTCTGCCATGATACGGTT
GAGGAAATTATTAATGCCTTGGAAAATGAGGCATCCAGTTCATATGATGAATGGTCTGCC
ACAGCCCTCAAGAAACTGAAAGAAGCCTCCCCATTGAGCTTAAAGGTTACTTTACGATCT
ATACGAGAAGGTAGATTTCAACCTCTTGATCAGTGTCTGGCTCGAGAATATCGCATATCT
CTTGTTGGGATCACCAAATGGGTCTCTGATGATTTCTGTGAGGGTGTTCGAGCACGGTTC
GTGGACAAGGACTTTGCTCCAAAGTGGGATCCTCCAAGTCTGGGAGAAGTAACCAAAGAC
ATGGTTGATTGCTATTTCACCCGACTCGATGAATTCGAGCCTGAACTAGAGCTACCAACG
GCATTGCGAGAGCCTTACATGTGA

Peptide Sequence

PEP ID

VIT_04s0008g06610.t01
PEP Infomation

pep chromosome:12X:4:6578496:6598764:-1 gene:VIT_04s0008g06610 transcript:VIT_04s0008g06610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQRAKAVLSPAVRCSLQRFGVFSHHRSFSALPNYARNDDLQEQVLVEGRAKSRAAILNRP
SDLNALTIPMVARLKRLYESWEENSDLGFVIMKGSGRALCSGGDVVALNQLINEGKVEEC
KKFFETLYKFVYLLGTYVKPNVAIVDGITMGGGAGISIPAMFRVVTDKTVFATPETQMGF
HPDAGASFYLSRLPGYLGEYLALTGEKLNGVEMIACGLATHYSLTARLPLIEERLGKLIT
DDPSVIESSLEQYGDLVYPDKRSVLHKIETIDKCFCHDTVEEIINALENEASSSYDEWSA
TALKKLKEASPLSLKVTLRSIREGRFQPLDQCLAREYRISLVGITKWVSDDFCEGVRARF
VDKDFAPKWDPPSLGEVTKDMVDCYFTRLDEFEPELELPTALREPYM

Transcript Sequence

Transcript ID

VIT_04s0008g06610.t01
Transcript Infomation

cdna chromosome:12X:4:6578496:6598764:-1 gene:VIT_04s0008g06610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGATAACCGGATTGATTGAAATAGGCGTAGCCGAGTAGCTGAACGTTTAAGGCAGTTTT
GGGCAGTGAGAGGGAGAGAGGCGAAGATGCAAAGAGCTAAAGCAGTGTTGTCACCAGCAG
TGAGGTGTTCCCTACAGAGATTTGGGGTTTTCTCTCATCACAGAAGCTTCTCTGCTCTGC
CAAATTATGCCCGAAACGATGATCTCCAAGAGCAGGTGTTAGTGGAAGGGAGGGCAAAGT
CAAGGGCAGCCATTCTCAATAGACCATCTGATCTCAATGCTCTCACTATTCCAATGGTGG
CCCGGCTCAAAAGACTATATGAATCATGGGAAGAAAACTCAGATCTTGGATTTGTCATAA
TGAAGGGTAGTGGCAGGGCCTTATGTTCTGGTGGAGATGTTGTTGCTCTCAATCAGCTGA
TTAATGAAGGGAAAGTTGAGGAGTGTAAAAAGTTTTTTGAGACTTTGTATAAGTTCGTAT
ACCTTCTAGGAACGTATGTGAAGCCAAATGTGGCTATCGTGGATGGTATTACCATGGGAG
GTGGCGCTGGAATTTCCATCCCGGCAATGTTTCGTGTGGTAACTGATAAAACGGTTTTTG
CCACTCCAGAGACTCAAATGGGATTCCATCCTGATGCTGGTGCTTCATTCTATCTTTCTC
GTCTACCAGGATATTTAGGGGAATACTTGGCTCTAACAGGAGAAAAGCTCAATGGTGTAG
AAATGATTGCCTGTGGCCTTGCTACACACTACTCACTGACTGCAAGACTTCCCTTGATTG
AAGAACGTCTTGGTAAATTGATCACGGATGATCCTTCTGTCATAGAGTCTTCTCTTGAGC
AATATGGTGACCTTGTCTACCCAGATAAGAGGAGTGTTCTTCATAAGATTGAGACAATTG
ATAAATGTTTCTGCCATGATACGGTTGAGGAAATTATTAATGCCTTGGAAAATGAGGCAT
CCAGTTCATATGATGAATGGTCTGCCACAGCCCTCAAGAAACTGAAAGAAGCCTCCCCAT
TGAGCTTAAAGGTTACTTTACGATCTATACGAGAAGGTAGATTTCAACCTCTTGATCAGT
GTCTGGCTCGAGAATATCGCATATCTCTTGTTGGGATCACCAAATGGGTCTCTGATGATT
TCTGTGAGGGTGTTCGAGCACGGTTCGTGGACAAGGACTTTGCTCCAAAGTGGGATCCTC
CAAGTCTGGGAGAAGTAACCAAAGACATGGTTGATTGCTATTTCACCCGACTCGATGAAT
TCGAGCCTGAACTAGAGCTACCAACGGCATTGCGAGAGCCTTACATGTGATGCAGATTCT
CCGATGTATTCAGAGGGCAAGTGTAAAATTTTGCAATTTTTTTGTGAGCAGCAGTGCTGA
GGGATATCTGGAAATACGCCTTTTAATTTCAATTATGTATTGTGATAGACTGTTAGCTCA
AGGTTGCCACCCAAGGCCATTATTTTTAAGAGGGCTTGATGTGTATTTCAAGTTTTCTAT
ACATTATTCACAGCTGATAACCAATAAATTGGGGTCCTTGTTTCCCAACCTATCTCCCAT
AGCATTTGAAAGATGTGTATCTTTTATTTTTGTTTTCCTAGTTACATTTGATAGGCAAGC
ACGATGATATATATCCAACACAA