Plant GARDEN
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g06580.t01
CDS Infomation

cds chromosome:12X:4:6539106:6551264:1 gene:VIT_04s0008g06580 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase subunit beta [Source:UniProtKB/TrEMBL;Acc:F6H335]
Sequence

ATGGGGGCATCTGATGCCAAGGGAGATTTGGGCATGAGCAGTAGTATGGGTGAAAAGCTT
TCAAACGGAGTCCAAATGGAAATAGATGATGATCTGATGGGCTCAATCGAGATAGACGAC
TTAAACAAAGAATATTTGAAAACATTTTGCAAAAAGGTTGCGGTATCATTCTTTAATGAG
TATGGACTCATTCAGCATCAGATCAACTCCTTCAACGACTTCATCAAAAATGGAATTCAA
AGGGTTTTTGATTCTTTTGGCGAGATCCCTGTGGAGCCTGGGTATGACCCATCTAAGAGG
GGAGAGGGTGATTGGAGATACGCTTCTGTGAGGTTCGGGAAGGTCACCCTTGAACGGCCG
AGGGTATGGGCTGGTGAATCAGATGGTAAGGAGTCCCTGAATTTTTTGCCGAGACATGCA
CGTCTTCAGAACATGACGTACTCATCTCGGATGAAAGCTCAAGTTCATTTCCAGGTATAT
ACTCAGAAACTTGTAAGAAGTGACAAGTACAAAACTGGAAAAGACAACAAGTATGTTGAG
AAGAAGGTTATATTCGAAGATAACAGGGACATATTAATTGGGAGGATCCCTGTGATGGTG
AAGTCAGAACTATGTTGGATGAATGGTGTCGAGAGAGGTGACTGTGAATATGATCATGGA
GGATATTTTTTGATCAAGGGTGCAGAGAAAACATTCATTGCACAAGAACAGATTTGTTTG
AAGAGACTGTGGGTTTCCAGTAATCCAACTTGGATGGTTGCATACCGGCCAATCTGGAAA
AGGAAAAGAGTATATGTTAAATTAGAACCTCCAAAAGATGAAAATAATAGAGGAGGAGAA
AAAGTTCTTACAGTGTATTTTTCATCAACAGAGATTCCCATTTGGATATTGTTTTTTGCG
CTTGGTGCATCGTCAGACAAGGAAGTTGTTGATTTGATTGATTTCAACATTGATGATGCT
GGTATTTCAAATATTCTTGTTGCATCTATTCATGAAGCGGACAGGGAAGCAGAAAAGAAA
GGCATGTACTTCCGTAGACAAGGCAATGCTATCAGCTTTGTAGATAAACTTGTGAAAAGT
TGTAAATTTCCTCCTGGAGAAAGTATTCAAGAATGCATTAGCAAGTATTTGTTTCCCAAC
TTTAGTGGCGTCAAGCAAAAGGCTCGCTTTCTTGGGTATATGGTGAAGTGTCTTCTACAA
GCCTATACTGGGCGCAGAAAATGTGATAACAGAGATGATTTCAGAAACAAAAGATTAGAA
TTGGCTGGTGAGCTGCTTGAGCGAGAGCTTAGAGTGCACATTAGACATGCTGAAAGGCGC
ATGGTAAAAGCTATGCAGAGAGAACTTTATGGAGATCGTGACCTGCGACCTATTGAAAAT
TATCTGGATGCTTCCATTATCACCAATGGTCTTTCCAGGGCATTCTCAACTGGGCAATGG
TCCCATCCTTTCAAGAGGATGGAAAGGATATCTGGTGTAGTGGCAACTCTTAGACGAACA
AATCCCTTGCAGATGACAGCTGACATGAGGAAAACACGTCAGCAGGTCCAATACACAGGA
AAGGTTGGGGATGCCAGATACCCACACCCTTCTCACTGGGGGAAGGTTTGCTTTCTCTCT
ACTCCGGATGGTGAAAATTGTGGGCTTGTAAAAAATTTGGCCATTACAGGACTTGTCTCA
ACAGAGGTATTGGATCCATTGGTTGATAAATTGTTTGATTGTGGAATGGAGAAACTGGTA
GATGATACCTCTACCAAGCTGTCTGGAAAGAATAAAGTTTTTCTGGATGGTGACTGGGTT
GGAGTATGCGAAGATCCCATTTCATTTGTTGTGGAGCTAAGAACTAAACGGCGGCACAAG
GAATTGCCTCAACAGGTGGAAATCAAAAGAGACGAACAACAAGGAGAAGTTCGCATTTTT
TCTGACGCTGGAAGGATTCTACGTCCTCTCTTAGTAGTTGAGAATTTAAAGAAGGTTAAA
ACATTTAAAGGGGATGATTTTACTTTCCAGTCTCTTTTGGACAAGGGAATCGTGGAGCTC
ATTGGAGCTGAGGAAGAAGAAGATTGCTCTACAGCATGGGGCATTAAATACCTCTTAAAG
GGACATGATGACCCACCGGTGAAATACACACATTGTGAACTTGATATGTCTTTTTTATTA
GGGTTAAGTTGTGGAATAATCCCTTATGCAAATCATGACCATGCAAGGAGAGTACTATAC
CAGTCTGAGAAGCACTCTCAACAGGCTATTGGTTTTTCCACAACGAACCCTAATATTAGA
GTGGATACCCTCTCTCACCAACTATACTACCCTCAGAGGCCACTTTTTCGGACAATGATT
TCTGATTGTCTGGGAAAACCAGGATATTCAGAAGGTCATAAAGGAATAGTGCCAAGGCCT
GAATACTTCAATGGGCAGATTGCCATTGTTGCAGTTAATGTTCACCTGGGGTACAACCAA
GAGGACTCATTGGTAATGAACCGGGCTTCATTAGAGCGTGGTATGTTTCGTTCAGAGCAC
ATAAGAAGTTATAAATCTGAGGTCGACAATAATGAATCATTGGACAAAAAGCGAAAGTCC
GAGGACTCTGTACATTTTGGAAAGATGCAGAGTAAAATTGGACGTGTTGACAGCCTTGAT
GATGATGGTTTTCCATTCATCGGTGCAAACCTGCAGAATGGTGATATTGTCATTGGAAGG
TGTGCAGAATCTGGGGTTGATCACAGCATAAAACTGAAGCATACTGAGAGGGGCATGGTT
CAAAAGGTTGTGGTGTCAGCAAATGATGATGGAAAAAATTTTGCTGTAGTATCTCTGAGA
CAGGTCCGAACTCCATGCCTTGGAGACAAGTTTTCAAGCATGCATGGGCAAAAGGGTGTT
CTGGGGTTTCTAGAGTCCCAGGAGAACTTCCCTTTCACAATACAAGGAATAGTTCCAGAT
ATTGTAATAAACCCACATGCATTTCCTTCACGTCAGACTCCTGGTCAATTGCTAGAGGCT
GCTTTGGGAAAGGGGATTGCCTGTGGTGGTTTGCTGAGACATGCCACCCCTTTCTCCACC
CTCTCTGTGGATGCAATAGCAGATCAACTTCACAGGGCTGGATTTTCAAGATGGGGACAT
GAAAGGGTGTACAATGGACGCACTGGAGAAATGCTTCGCTCACTCATATTTATGGGGCCA
ACATTCTACCAGCGCCTGATTCACATGGCTGAGGATAAAGTAAAGTTCCGCAACACGGGG
CCAGTCCACCCGCTCACCCGTCAGCCAGTGTCGGATCGGAAGCGCTTTGGTGGGATCAAA
TTTGGGGAGATGGAGCGCGACTGCCTCATTGCTCACGGTGCTGCAGCAAATCTACATGAA
CGTCTCTTCACCCTCAGCGACTCAGCCTATATGCACATCTGTCGGAGATGCAAGAATATA
TCGAATGTGATCCAGCGTTCTGTGGCGGGTGGGCGGAAGGTAAGGGGCCCGTATTGTCGA
TACTGCGAGTCTTCTGAGGAAATAGTGAAGGTGAACGTGCCATATGGGGCGAAGTTGTTG
TGCCAGGAGCTCTTCAGCATGGGCATATCTTTGAAGTTTGAGACCCAGCTGTGTTAA

Peptide Sequence

PEP ID

VIT_04s0008g06580.t01
PEP Infomation

pep chromosome:12X:4:6539106:6551264:1 gene:VIT_04s0008g06580 transcript:VIT_04s0008g06580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase subunit beta [Source:UniProtKB/TrEMBL;Acc:F6H335]
Sequence

MGASDAKGDLGMSSSMGEKLSNGVQMEIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNE
YGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERP
RVWAGESDGKESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVE
KKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICL
KRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWILFFA
LGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKS
CKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLE
LAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQW
SHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLS
TPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWV
GVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVK
TFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGHDDPPVKYTHCELDMSFLL
GLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMI
SDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH
IRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGR
CAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGV
LGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFST
LSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTG
PVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNI
SNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC

Transcript Sequence

Transcript ID

VIT_04s0008g06580.t01
Transcript Infomation

cdna chromosome:12X:4:6539106:6551264:1 gene:VIT_04s0008g06580 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase subunit beta [Source:UniProtKB/TrEMBL;Acc:F6H335]
Sequence

ATTTCAACTCTAATGGGGGCATCTGATGCCAAGGGAGATTTGGGCATGAGCAGTAGTATG
GGTGAAAAGCTTTCAAACGGAGTCCAAATGGAAATAGATGATGATCTGATGGGCTCAATC
GAGATAGACGACTTAAACAAAGAATATTTGAAAACATTTTGCAAAAAGGTTGCGGTATCA
TTCTTTAATGAGTATGGACTCATTCAGCATCAGATCAACTCCTTCAACGACTTCATCAAA
AATGGAATTCAAAGGGTTTTTGATTCTTTTGGCGAGATCCCTGTGGAGCCTGGGTATGAC
CCATCTAAGAGGGGAGAGGGTGATTGGAGATACGCTTCTGTGAGGTTCGGGAAGGTCACC
CTTGAACGGCCGAGGGTATGGGCTGGTGAATCAGATGGTAAGGAGTCCCTGAATTTTTTG
CCGAGACATGCACGTCTTCAGAACATGACGTACTCATCTCGGATGAAAGCTCAAGTTCAT
TTCCAGGTATATACTCAGAAACTTGTAAGAAGTGACAAGTACAAAACTGGAAAAGACAAC
AAGTATGTTGAGAAGAAGGTTATATTCGAAGATAACAGGGACATATTAATTGGGAGGATC
CCTGTGATGGTGAAGTCAGAACTATGTTGGATGAATGGTGTCGAGAGAGGTGACTGTGAA
TATGATCATGGAGGATATTTTTTGATCAAGGGTGCAGAGAAAACATTCATTGCACAAGAA
CAGATTTGTTTGAAGAGACTGTGGGTTTCCAGTAATCCAACTTGGATGGTTGCATACCGG
CCAATCTGGAAAAGGAAAAGAGTATATGTTAAATTAGAACCTCCAAAAGATGAAAATAAT
AGAGGAGGAGAAAAAGTTCTTACAGTGTATTTTTCATCAACAGAGATTCCCATTTGGATA
TTGTTTTTTGCGCTTGGTGCATCGTCAGACAAGGAAGTTGTTGATTTGATTGATTTCAAC
ATTGATGATGCTGGTATTTCAAATATTCTTGTTGCATCTATTCATGAAGCGGACAGGGAA
GCAGAAAAGAAAGGCATGTACTTCCGTAGACAAGGCAATGCTATCAGCTTTGTAGATAAA
CTTGTGAAAAGTTGTAAATTTCCTCCTGGAGAAAGTATTCAAGAATGCATTAGCAAGTAT
TTGTTTCCCAACTTTAGTGGCGTCAAGCAAAAGGCTCGCTTTCTTGGGTATATGGTGAAG
TGTCTTCTACAAGCCTATACTGGGCGCAGAAAATGTGATAACAGAGATGATTTCAGAAAC
AAAAGATTAGAATTGGCTGGTGAGCTGCTTGAGCGAGAGCTTAGAGTGCACATTAGACAT
GCTGAAAGGCGCATGGTAAAAGCTATGCAGAGAGAACTTTATGGAGATCGTGACCTGCGA
CCTATTGAAAATTATCTGGATGCTTCCATTATCACCAATGGTCTTTCCAGGGCATTCTCA
ACTGGGCAATGGTCCCATCCTTTCAAGAGGATGGAAAGGATATCTGGTGTAGTGGCAACT
CTTAGACGAACAAATCCCTTGCAGATGACAGCTGACATGAGGAAAACACGTCAGCAGGTC
CAATACACAGGAAAGGTTGGGGATGCCAGATACCCACACCCTTCTCACTGGGGGAAGGTT
TGCTTTCTCTCTACTCCGGATGGTGAAAATTGTGGGCTTGTAAAAAATTTGGCCATTACA
GGACTTGTCTCAACAGAGGTATTGGATCCATTGGTTGATAAATTGTTTGATTGTGGAATG
GAGAAACTGGTAGATGATACCTCTACCAAGCTGTCTGGAAAGAATAAAGTTTTTCTGGAT
GGTGACTGGGTTGGAGTATGCGAAGATCCCATTTCATTTGTTGTGGAGCTAAGAACTAAA
CGGCGGCACAAGGAATTGCCTCAACAGGTGGAAATCAAAAGAGACGAACAACAAGGAGAA
GTTCGCATTTTTTCTGACGCTGGAAGGATTCTACGTCCTCTCTTAGTAGTTGAGAATTTA
AAGAAGGTTAAAACATTTAAAGGGGATGATTTTACTTTCCAGTCTCTTTTGGACAAGGGA
ATCGTGGAGCTCATTGGAGCTGAGGAAGAAGAAGATTGCTCTACAGCATGGGGCATTAAA
TACCTCTTAAAGGGACATGATGACCCACCGGTGAAATACACACATTGTGAACTTGATATG
TCTTTTTTATTAGGGTTAAGTTGTGGAATAATCCCTTATGCAAATCATGACCATGCAAGG
AGAGTACTATACCAGTCTGAGAAGCACTCTCAACAGGCTATTGGTTTTTCCACAACGAAC
CCTAATATTAGAGTGGATACCCTCTCTCACCAACTATACTACCCTCAGAGGCCACTTTTT
CGGACAATGATTTCTGATTGTCTGGGAAAACCAGGATATTCAGAAGGTCATAAAGGAATA
GTGCCAAGGCCTGAATACTTCAATGGGCAGATTGCCATTGTTGCAGTTAATGTTCACCTG
GGGTACAACCAAGAGGACTCATTGGTAATGAACCGGGCTTCATTAGAGCGTGGTATGTTT
CGTTCAGAGCACATAAGAAGTTATAAATCTGAGGTCGACAATAATGAATCATTGGACAAA
AAGCGAAAGTCCGAGGACTCTGTACATTTTGGAAAGATGCAGAGTAAAATTGGACGTGTT
GACAGCCTTGATGATGATGGTTTTCCATTCATCGGTGCAAACCTGCAGAATGGTGATATT
GTCATTGGAAGGTGTGCAGAATCTGGGGTTGATCACAGCATAAAACTGAAGCATACTGAG
AGGGGCATGGTTCAAAAGGTTGTGGTGTCAGCAAATGATGATGGAAAAAATTTTGCTGTA
GTATCTCTGAGACAGGTCCGAACTCCATGCCTTGGAGACAAGTTTTCAAGCATGCATGGG
CAAAAGGGTGTTCTGGGGTTTCTAGAGTCCCAGGAGAACTTCCCTTTCACAATACAAGGA
ATAGTTCCAGATATTGTAATAAACCCACATGCATTTCCTTCACGTCAGACTCCTGGTCAA
TTGCTAGAGGCTGCTTTGGGAAAGGGGATTGCCTGTGGTGGTTTGCTGAGACATGCCACC
CCTTTCTCCACCCTCTCTGTGGATGCAATAGCAGATCAACTTCACAGGGCTGGATTTTCA
AGATGGGGACATGAAAGGGTGTACAATGGACGCACTGGAGAAATGCTTCGCTCACTCATA
TTTATGGGGCCAACATTCTACCAGCGCCTGATTCACATGGCTGAGGATAAAGTAAAGTTC
CGCAACACGGGGCCAGTCCACCCGCTCACCCGTCAGCCAGTGTCGGATCGGAAGCGCTTT
GGTGGGATCAAATTTGGGGAGATGGAGCGCGACTGCCTCATTGCTCACGGTGCTGCAGCA
AATCTACATGAACGTCTCTTCACCCTCAGCGACTCAGCCTATATGCACATCTGTCGGAGA
TGCAAGAATATATCGAATGTGATCCAGCGTTCTGTGGCGGGTGGGCGGAAGGTAAGGGGC
CCGTATTGTCGATACTGCGAGTCTTCTGAGGAAATAGTGAAGGTGAACGTGCCATATGGG
GCGAAGTTGTTGTGCCAGGAGCTCTTCAGCATGGGCATATCTTTGAAGTTTGAGACCCAG
CTGTGTTAAAGAGTCTGCAGGCTCTTCAAGTAACCAGTGGAGGACCTAGTTGTAATTACA
AGACAAACATTGGTATTATTATGAATGACATT