Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g06570.t01
CDS Infomation

cds chromosome:12X:4:6534853:6537162:1 gene:VIT_04s0008g06570 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase [Source:UniProtKB/TrEMBL;Acc:D7SV37]
Sequence

ATGGACCTTGAATCAGTGAGAGACTCTTTGATCAGGCAAGAGGATACCATCGTTTTTAGC
CTCATTGAGAGGGCCAAATTCCCCATCAATTCTTGGGCCTACTCTCCCCCTCAGAATGGA
GTTGATGCATTTTCTGCCTCTTCTTTCCTTCACTCCTTTGTCAGGGAATCCGAGGCTCTT
CACGCTAAGGCCGGTAGATATGAGAACCCAGAAGAAAATCCCTTTTTCCCAGATGATTTA
CCACCTTCAATGGTGCCAACCCATGATTATAAGCAGGTTTTGCATCCTGCAGGCTCTTCC
ATTAATGTAAACAAGACTATATGGGATATATACTTAAACAAACTGCTTCCATTGTTTGCT
GCTGAGGGCGATGATGGCAACTATGGACTAACTGCAGCTTGTGATCTTGCATGTTTGCAG
GCCATCTCTAGAAGGATTCACTATGGAAAATTCGTGGCCGAGGTTAAATTCAAGGAATCC
CCAGAAGAATATGGGCCTGCAATCCATGATCAGGATAGAGCAGGTCTGATGAAAATGTTG
ACATTTGAGGCAGTAGAAGAGATGGTGAAGAAAAGGGTGGAGAAGAAAGCTACGGTTTTT
GGACAGGAAGTTAACCTTAGTGACAATAGCAAAAGCAAAGAAACCTATAAAGTCGATCCC
TCCGTGGTTTCTCGGCTGTATGAAGAATGGGTGATGCCACTCACCAAGCAAGTCCAAGTT
GAGTATCTTCTTCGCCGCCTTGACTGA

Peptide Sequence

PEP ID

VIT_04s0008g06570.t01
PEP Infomation

pep chromosome:12X:4:6534853:6537162:1 gene:VIT_04s0008g06570 transcript:VIT_04s0008g06570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase [Source:UniProtKB/TrEMBL;Acc:D7SV37]
Sequence

MDLESVRDSLIRQEDTIVFSLIERAKFPINSWAYSPPQNGVDAFSASSFLHSFVRESEAL
HAKAGRYENPEENPFFPDDLPPSMVPTHDYKQVLHPAGSSINVNKTIWDIYLNKLLPLFA
AEGDDGNYGLTAACDLACLQAISRRIHYGKFVAEVKFKESPEEYGPAIHDQDRAGLMKML
TFEAVEEMVKKRVEKKATVFGQEVNLSDNSKSKETYKVDPSVVSRLYEEWVMPLTKQVQV
EYLLRRLD

Transcript Sequence

Transcript ID

VIT_04s0008g06570.t01
Transcript Infomation

cdna chromosome:12X:4:6534853:6537162:1 gene:VIT_04s0008g06570 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate mutase [Source:UniProtKB/TrEMBL;Acc:D7SV37]
Sequence

TGTGTACGTTTTGGCTGCTGAGAAAATTTTGTTTACTGACCCATATACAAAAAATGGACC
TTGAATCAGTGAGAGACTCTTTGATCAGGCAAGAGGATACCATCGTTTTTAGCCTCATTG
AGAGGGCCAAATTCCCCATCAATTCTTGGGCCTACTCTCCCCCTCAGAATGGAGTTGATG
CATTTTCTGCCTCTTCTTTCCTTCACTCCTTTGTCAGGGAATCCGAGGCTCTTCACGCTA
AGGCCGGTAGATATGAGAACCCAGAAGAAAATCCCTTTTTCCCAGATGATTTACCACCTT
CAATGGTGCCAACCCATGATTATAAGCAGGTTTTGCATCCTGCAGGCTCTTCCATTAATG
TAAACAAGACTATATGGGATATATACTTAAACAAACTGCTTCCATTGTTTGCTGCTGAGG
GCGATGATGGCAACTATGGACTAACTGCAGCTTGTGATCTTGCATGTTTGCAGGCCATCT
CTAGAAGGATTCACTATGGAAAATTCGTGGCCGAGGTTAAATTCAAGGAATCCCCAGAAG
AATATGGGCCTGCAATCCATGATCAGGATAGAGCAGGTCTGATGAAAATGTTGACATTTG
AGGCAGTAGAAGAGATGGTGAAGAAAAGGGTGGAGAAGAAAGCTACGGTTTTTGGACAGG
AAGTTAACCTTAGTGACAATAGCAAAAGCAAAGAAACCTATAAAGTCGATCCCTCCGTGG
TTTCTCGGCTGTATGAAGAATGGGTGATGCCACTCACCAAGCAAGTCCAAGTTGAGTATC
TTCTTCGCCGCCTTGACTGAAATCCTGGGGAGTAGTTTGTATGCATAATTTTGATCAATT
TGATGATCAAGTAATACTTCTTGTTGCAAAATAAAATGCAGTTGATGTATTTGCCAAAAG
ATATCTCTGTATTTG