Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g06040.t01
CDS Infomation

cds chromosome:12X:4:5725900:5739416:1 gene:VIT_04s0008g06040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:F6H3U9]
Sequence

ATGTATTCGGCTTCCGCCATTGACAAGGCTACCGAATTTTGCTTCTTACTATGCCATGAA
ACAAGCTACAACTACAAGTACTCGATCAGAGTGCCTGTCACCGAATCTAATCCGCATCAC
TGTGATCCAATTATACCTCTTCTCCTCGCAATGACCATAATACCCTCAAAGATGATGGCT
TCAACAATGCTCTCTCTCGTCTCTGCTGCTCTGCCACTACAAGAAAATCACAAGGGGAAG
ATGAATCTTGGCAGTTCTGATTGTAGTTCTTTTTTGAGGAAAGAGAAAAGAAACCCCTTC
ATGAAGACCAAGTCTTTTGGCCGGATAAATATGGCTATTGCAGTCAATACCTCTCGTTTT
GAAGGTGTAACAATGGCCCCTCCTGATCCAATTCTTGGAGTTTCTGAGGCTTTCAGAGCA
GACAATAGTGAGATGAAGCTCAACCTTGGAGTCGGGGCCTACCGAACAGAAGAACTCCAA
CCTTATGTGCTTAATGTTGTCAAGAAGGCAGAAAATCTTATGCTGGAGAGAGGAGAAAAT
AAAGAGTATCTTCCGATCGAAGGTTTGGCTGCATTTAATAAAGTTACAGCAGAGTTATTA
TTTGGAGCAGGCAATCCAGTAATTGAGCAACAAAGGGTTGCAACCGTTCAAGGTCTTTCT
GGAACTGGTTCTCTTCGACTTGCTGCGGCCCTTATAGAACGATATTTTCCTGGGGCAAAA
GTTTTGATATCATCGCCAACATGGGGTAATCACAAGAATATTTTCAATGATGCTAGAGTT
CCCTGGTCTGAATACCGATACTATGACCCAAAAACAGTTGGCTTGGATTTTGATGGGATG
ATATCCGATATAAAGGCAGCCCCAGAAGGATCTTTTGTGTTGCTTCATGGCTGTGCTCAC
AACCCAACTGGTATTGATCCAACTCCTGAACAGTGGGAAAAGATTGCTGATGTCATTCAA
GAGAAGAATCACATTCCTTTCTTTGATGTTGCATACCAGGGATTTGCAAGTGGAAGCCTT
GATGCAGATGCGTCATCCGTGAGATTGTTTGCTGCACGTGGTATGGAGCTTCTGGTTGCC
CAATCATACAGTAAAAATCTGGGTCTTTATGCAGAAAGGATTGGGGCAATCAATGTGGTC
TGCTCATCAGCAGATGCAGCAGCAAGGGTAAAGAGTCAGTTGAAAAGGATTGCTCGACCA
ATGTACTCAAATCCTCCTATTCATGGAGCTAGGATTGTTGCCAATGTTGTTGGTGATCCA
GCTCTCTTCAATGAATGGAAAGAGGAGATGGAATTGATGGCTGGAAGGATAAAGAATGTG
AGACAGAAACTATTTGACAGCCTCTCTGCAAAAGATAAGTGTGGAAAGGATTGGTCATTT
ATACTAAAGCAGATTGGCATGTTCTCATTCACAGGGCTGAGCAAAGTTCAGAGTGAGAAT
ATGACAAATAAGTGGCATGTGTACATGACCAAGGACGGGAGGATCTCATTGGCTGGATTG
TCTTTGGCCAAATGCGAATATCTTGCAGATGCCATCATTGATTCATTTCACTGTGTCAGT
TGA

Peptide Sequence

PEP ID

VIT_04s0008g06040.t01
PEP Infomation

pep chromosome:12X:4:5725900:5739416:1 gene:VIT_04s0008g06040 transcript:VIT_04s0008g06040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:F6H3U9]
Sequence

MYSASAIDKATEFCFLLCHETSYNYKYSIRVPVTESNPHHCDPIIPLLLAMTIIPSKMMA
STMLSLVSAALPLQENHKGKMNLGSSDCSSFLRKEKRNPFMKTKSFGRINMAIAVNTSRF
EGVTMAPPDPILGVSEAFRADNSEMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGEN
KEYLPIEGLAAFNKVTAELLFGAGNPVIEQQRVATVQGLSGTGSLRLAAALIERYFPGAK
VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFDGMISDIKAAPEGSFVLLHGCAH
NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDADASSVRLFAARGMELLVA
QSYSKNLGLYAERIGAINVVCSSADAAARVKSQLKRIARPMYSNPPIHGARIVANVVGDP
ALFNEWKEEMELMAGRIKNVRQKLFDSLSAKDKCGKDWSFILKQIGMFSFTGLSKVQSEN
MTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHCVS

Transcript Sequence

Transcript ID

VIT_04s0008g06040.t01
Transcript Infomation

cdna chromosome:12X:4:5725900:5739416:1 gene:VIT_04s0008g06040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:F6H3U9]
Sequence

ATGTATTCGGCTTCCGCCATTGACAAGGCTACCGAATTTTGCTTCTTACTATGCCATGAA
ACAAGCTACAACTACAAGTACTCGATCAGAGTGCCTGTCACCGAATCTAATCCGCATCAC
TGTGATCCAATTATACCTCTTCTCCTCGCAATGACCATAATACCCTCAAAGATGATGGCT
TCAACAATGCTCTCTCTCGTCTCTGCTGCTCTGCCACTACAAGAAAATCACAAGGGGAAG
ATGAATCTTGGCAGTTCTGATTGTAGTTCTTTTTTGAGGAAAGAGAAAAGAAACCCCTTC
ATGAAGACCAAGTCTTTTGGCCGGATAAATATGGCTATTGCAGTCAATACCTCTCGTTTT
GAAGGTGTAACAATGGCCCCTCCTGATCCAATTCTTGGAGTTTCTGAGGCTTTCAGAGCA
GACAATAGTGAGATGAAGCTCAACCTTGGAGTCGGGGCCTACCGAACAGAAGAACTCCAA
CCTTATGTGCTTAATGTTGTCAAGAAGGCAGAAAATCTTATGCTGGAGAGAGGAGAAAAT
AAAGAGTATCTTCCGATCGAAGGTTTGGCTGCATTTAATAAAGTTACAGCAGAGTTATTA
TTTGGAGCAGGCAATCCAGTAATTGAGCAACAAAGGGTTGCAACCGTTCAAGGTCTTTCT
GGAACTGGTTCTCTTCGACTTGCTGCGGCCCTTATAGAACGATATTTTCCTGGGGCAAAA
GTTTTGATATCATCGCCAACATGGGGTAATCACAAGAATATTTTCAATGATGCTAGAGTT
CCCTGGTCTGAATACCGATACTATGACCCAAAAACAGTTGGCTTGGATTTTGATGGGATG
ATATCCGATATAAAGGCAGCCCCAGAAGGATCTTTTGTGTTGCTTCATGGCTGTGCTCAC
AACCCAACTGGTATTGATCCAACTCCTGAACAGTGGGAAAAGATTGCTGATGTCATTCAA
GAGAAGAATCACATTCCTTTCTTTGATGTTGCATACCAGGGATTTGCAAGTGGAAGCCTT
GATGCAGATGCGTCATCCGTGAGATTGTTTGCTGCACGTGGTATGGAGCTTCTGGTTGCC
CAATCATACAGTAAAAATCTGGGTCTTTATGCAGAAAGGATTGGGGCAATCAATGTGGTC
TGCTCATCAGCAGATGCAGCAGCAAGGGTAAAGAGTCAGTTGAAAAGGATTGCTCGACCA
ATGTACTCAAATCCTCCTATTCATGGAGCTAGGATTGTTGCCAATGTTGTTGGTGATCCA
GCTCTCTTCAATGAATGGAAAGAGGAGATGGAATTGATGGCTGGAAGGATAAAGAATGTG
AGACAGAAACTATTTGACAGCCTCTCTGCAAAAGATAAGTGTGGAAAGGATTGGTCATTT
ATACTAAAGCAGATTGGCATGTTCTCATTCACAGGGCTGAGCAAAGTTCAGAGTGAGAAT
ATGACAAATAAGTGGCATGTGTACATGACCAAGGACGGGAGGATCTCATTGGCTGGATTG
TCTTTGGCCAAATGCGAATATCTTGCAGATGCCATCATTGATTCATTTCACTGTGTCAGT
TGATATCGGTGGATGGATGATAGATATGCATTTTACAAGCACACAATTGATCATACTGGG
TGAGTCCTGAATTCCCTAGCAATTATTCCATTCAGACTTTTTGCAAAATCTTGTAATAAT
TTA