Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g05860.t01
CDS Infomation

cds chromosome:12X:4:5477408:5482561:1 gene:VIT_04s0008g05860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCAAATAAGAAACACAATGATGCAACATGAGGCGTTGTTCAAGGAACAGGTTCAG
GCACTGCACAAGCTGTACAGTATCCAAAAATCAGCAATGCAAGAAAGACAGAAACAAATT
TATTCTCAAGCCCAATTTCTGGCATTTAGTTCTGAAAAACTTGCATTTGCGGATGGTCAA
ATCAGTGGTTCTGTTCTGGAAGGGAAGCCTTTGAGGTCTGCCTATGTTCCTGTTGCAGCT
GACAAAGAAGAATCACTTGCTCTTTCTTTGCAACCTTTTAGTGCAATGAATGGGTTTAAA
GGCTGTGGTTCATTATGGACAGACAGCAGAGGACTCAAAACTTCCCACACTGCTCAGAGC
AAACCAATAAGAAACTTTGATCTTGAAAGACTCCCAGAAGACTATATGGATGAGTCTGAG
ATCCAGGTTGTGTCAAAATGTTCTGACATGCCAGGTGCTAACTCAATTTTGTCTAAAAGA
ACACCGTACAAAGATGAAAATTCGTTTCTTGGAGCCAAAATCTCTTTCAGTCAAGTGGAT
TCTCCAAGTTCAAAGCAGATGCAAGGAGAATCAGACTTGAGAATCCTATTGGTTCCAAGG
AAGGAAATCAATCAAGATTGTGATGGGTCTTCAGAAGGCAAAGTTGATAGTACTAATATT
AAGAAGTATGCTACAGTCCTTCAGAATCTAAATAACACTACTCATAGCACAACGTCACAA
GATTTTCCACTGAAGTATACACCTGGAGTCGGAAACTTCCATGCATGCCAGGATTCGAGC
CCTTCAACTCTATCTCATATGGACAAGCAAATGTCATTGCATCATCAGGGATTATTGGTT
CTCATGACCAAGGGGTTAAATCCTGTTGAATCAGAGAAAGGTCATCTTGAGAGAACCACA
GAGCAAGTCACTGACAGCAGTGTTCAAGTTTTGAAGCAATTACATCAACATCCAGAAGGT
GAAAGTATGGTTGCAACAACTCACCTGAAATTGGGGGAACAGCCGAATGGTTATATTTGT
GGAGCTTCATTTTCTAAAAATCCTCTCATTTTCTCGGTAGGTTCTTCAACCCTGGAACCA
GTGCCAAGTGAAACTAAAGATCTTGAAAATTTCCTTGTCCAAGGATCACGGTCCTCAGAA
ACAAACTCAATTTCTGGAAAGCAAATTTCTCACCCATTTTCTTTGCCCAGCCCTCCAAAA
AGCAAAGATGGTGGAAATGCAAATTCCAATGACTTGGGTACTGAGAATTCCAATGGCTCG
GGTAATGGAAGCAATAGTGTTCATTCCCAAGAGTCCCAAGATACAAAGAGCTGTCAGGAT
GATAAAACTAGCATGCATGTGAAGGACACACCTGGATTTGGTGATGGTTATAGTGAGGCA
GGCCATGCAAGCCAGGGCAGAGGTGAAGCCACTGAGTCTGAACTTGAAGAACTGCTCCTG
GCTGAGGATGGTGCTAAACCTTCTTTCTCCTCTACCATTTCTGAAATCAAGCACATGGAC
AACTGTTCAAATGGTGATCCTAAAACCATCACAAACTCCAATGAACATCTTGTAACATCC
ATCGGTGAGGACCTAAAAGATAAATCAACCCTGGAGAGAGTACGAGAAAACATTGCAGCA
GAGATTTTGCTTAGTTTTGCACCTAGTGGGCCACATGCTGATCACAAACGTACTCAAATT
GAGGCTGAGTCTGGAAGATCAAGCGGAGGCAATATGAGTTCTGATAAGAAGTGGAATCTT
CGAGAGAGAAGGTGCACCAATTATAGCAGCAACAGTGGCATGAACGAATCCATGAGATGG
ACAAAATCTGTTCGCAGAACACGGACCTCCAGAAAACCCCGATAA

Peptide Sequence

PEP ID

VIT_04s0008g05860.t01
PEP Infomation

pep chromosome:12X:4:5477408:5482561:1 gene:VIT_04s0008g05860 transcript:VIT_04s0008g05860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEQIRNTMMQHEALFKEQVQALHKLYSIQKSAMQERQKQIYSQAQFLAFSSEKLAFADGQ
ISGSVLEGKPLRSAYVPVAADKEESLALSLQPFSAMNGFKGCGSLWTDSRGLKTSHTAQS
KPIRNFDLERLPEDYMDESEIQVVSKCSDMPGANSILSKRTPYKDENSFLGAKISFSQVD
SPSSKQMQGESDLRILLVPRKEINQDCDGSSEGKVDSTNIKKYATVLQNLNNTTHSTTSQ
DFPLKYTPGVGNFHACQDSSPSTLSHMDKQMSLHHQGLLVLMTKGLNPVESEKGHLERTT
EQVTDSSVQVLKQLHQHPEGESMVATTHLKLGEQPNGYICGASFSKNPLIFSVGSSTLEP
VPSETKDLENFLVQGSRSSETNSISGKQISHPFSLPSPPKSKDGGNANSNDLGTENSNGS
GNGSNSVHSQESQDTKSCQDDKTSMHVKDTPGFGDGYSEAGHASQGRGEATESELEELLL
AEDGAKPSFSSTISEIKHMDNCSNGDPKTITNSNEHLVTSIGEDLKDKSTLERVRENIAA
EILLSFAPSGPHADHKRTQIEAESGRSSGGNMSSDKKWNLRERRCTNYSSNSGMNESMRW
TKSVRRTRTSRKPR

Transcript Sequence

Transcript ID

VIT_04s0008g05860.t01
Transcript Infomation

cdna chromosome:12X:4:5477408:5482561:1 gene:VIT_04s0008g05860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTCTTCCCACGAATAGCAGGCTTGCACTCCAGATCTGCTAAACTTTCAGGTACTTCCCT
CTTTTTCCTCACCTTGTTTGGTTCCCTAGAAACCTCACCAAGCAGAGGAAAACGATAGAA
AATTTGTGATCCCTTCGGCTTCCCTCTTGTTCCTTTAGTTTCCAGAAGAAGAAAAAGAAA
AGAAGAATTGAGACAGCTCAATTTAGGTCTTAATGGTGGTAGGAGCCAGGAGGCACAGTG
AAAGTGGACTTGATTTGGACTTCCAAGATGTAGAGTTTAAATTTTTTTATCTTAAAGCAA
TTAAAGAGAGGAATCTGAATCAGGACCTCCAATTTCTTTTTAGAACTTCCATCATTCGAT
AACTTATGCCTTGGCTTAACATTCCAGAACAATTCCAAAAAATACATGGAGCAAATAAGA
AACACAATGATGCAACATGAGGCGTTGTTCAAGGAACAGGTTCAGGCACTGCACAAGCTG
TACAGTATCCAAAAATCAGCAATGCAAGAAAGACAGAAACAAATTTATTCTCAAGCCCAA
TTTCTGGCATTTAGTTCTGAAAAACTTGCATTTGCGGATGGTCAAATCAGTGGTTCTGTT
CTGGAAGGGAAGCCTTTGAGGTCTGCCTATGTTCCTGTTGCAGCTGACAAAGAAGAATCA
CTTGCTCTTTCTTTGCAACCTTTTAGTGCAATGAATGGGTTTAAAGGCTGTGGTTCATTA
TGGACAGACAGCAGAGGACTCAAAACTTCCCACACTGCTCAGAGCAAACCAATAAGAAAC
TTTGATCTTGAAAGACTCCCAGAAGACTATATGGATGAGTCTGAGATCCAGGTTGTGTCA
AAATGTTCTGACATGCCAGGTGCTAACTCAATTTTGTCTAAAAGAACACCGTACAAAGAT
GAAAATTCGTTTCTTGGAGCCAAAATCTCTTTCAGTCAAGTGGATTCTCCAAGTTCAAAG
CAGATGCAAGGAGAATCAGACTTGAGAATCCTATTGGTTCCAAGGAAGGAAATCAATCAA
GATTGTGATGGGTCTTCAGAAGGCAAAGTTGATAGTACTAATATTAAGAAGTATGCTACA
GTCCTTCAGAATCTAAATAACACTACTCATAGCACAACGTCACAAGATTTTCCACTGAAG
TATACACCTGGAGTCGGAAACTTCCATGCATGCCAGGATTCGAGCCCTTCAACTCTATCT
CATATGGACAAGCAAATGTCATTGCATCATCAGGGATTATTGGTTCTCATGACCAAGGGG
TTAAATCCTGTTGAATCAGAGAAAGGTCATCTTGAGAGAACCACAGAGCAAGTCACTGAC
AGCAGTGTTCAAGTTTTGAAGCAATTACATCAACATCCAGAAGGTGAAAGTATGGTTGCA
ACAACTCACCTGAAATTGGGGGAACAGCCGAATGGTTATATTTGTGGAGCTTCATTTTCT
AAAAATCCTCTCATTTTCTCGGTAGGTTCTTCAACCCTGGAACCAGTGCCAAGTGAAACT
AAAGATCTTGAAAATTTCCTTGTCCAAGGATCACGGTCCTCAGAAACAAACTCAATTTCT
GGAAAGCAAATTTCTCACCCATTTTCTTTGCCCAGCCCTCCAAAAAGCAAAGATGGTGGA
AATGCAAATTCCAATGACTTGGGTACTGAGAATTCCAATGGCTCGGGTAATGGAAGCAAT
AGTGTTCATTCCCAAGAGTCCCAAGATACAAAGAGCTGTCAGGATGATAAAACTAGCATG
CATGTGAAGGACACACCTGGATTTGGTGATGGTTATAGTGAGGCAGGCCATGCAAGCCAG
GGCAGAGGTGAAGCCACTGAGTCTGAACTTGAAGAACTGCTCCTGGCTGAGGATGGTGCT
AAACCTTCTTTCTCCTCTACCATTTCTGAAATCAAGCACATGGACAACTGTTCAAATGGT
GATCCTAAAACCATCACAAACTCCAATGAACATCTTGTAACATCCATCGGTGAGGACCTA
AAAGATAAATCAACCCTGGAGAGAGTACGAGAAAACATTGCAGCAGAGATTTTGCTTAGT
TTTGCACCTAGTGGGCCACATGCTGATCACAAACGTACTCAAATTGAGGCTGAGTCTGGA
AGATCAAGCGGAGGCAATATGAGTTCTGATAAGAAGTGGAATCTTCGAGAGAGAAGGTGC
ACCAATTATAGCAGCAACAGTGGCATGAACGAATCCATGAGATGGACAAAATCTGTTCGC
AGAACACGGACCTCCAGAAAACCCCGATAACCAGTTTGAAGATTGTTGTACATAGTTGGT
TGATCTTCTTCTGTTTGGAACTTCAATGATTAGAAGCATTTATGTGACAACCTGCTTTGT
CTATATTTAGAACATTGGTGTGGTGTTTTCCCCATCTTCTGAGTGAGGATGCTAAGTATG
AAGTGCTTATAGCCTTAT