Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g05830.t01
CDS Infomation

cds chromosome:12X:4:5420646:5423923:-1 gene:VIT_04s0008g05830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAAGTGCGAGCGAAACGACGTCGGATCGTTAGTCCTCAACCGCGCCGCTGGCGGT
GGAAGTTTTCGTCTATTTTCGTCATCCTCCGGTGCGACATTTCGCAAGAAAGTATTTGAT
TTCGTTCGTTGTGGTGGTTCCCGCCATTTCCGGGAAGATGAGGTGGCAGGCGTTCAGCCC
TTGCCGCTGGCTCCGGAGCCGGCGCAAGAGCGATCGGAGCCGAGGAGGAAGGGATCGGAG
AAGCTGTCGGAGCTGTTGAAGAATTCGTGGGAGGGTTGGGGTGAAGAGGATGGGAATGCT
GAAGAGACGAAGAGGAAGACTGAGGCGTTTGAGGAGGTGAAGCGCGTGGTAAGGGATCTT
CAGGTTGGGGAAGGAGTGAGGAAGAGTGGAGGTGCGGTGGAGGTGAGGAGGCGTGCGAAG
GAAGACTTGGAAGCTCGAACTACGCTCGCAATGCTCGGAGCCATTCCTCCTCTGGTAGGG
ATGCTAGATTCTGAGGATCAGGAGTCTCAGATCGCGTCATTGTACGCTCTTCTTAATCTC
GGGATCGGAAACGATGAGAACAAAGCAGCCATTGTCAAAGCAGGAGCTGTCCACAAGATG
CTAAAGCTCATTGAATCTCCAAATGAACTCCCAAATTCAGCTGTCTCTGAAGCAGTTGTC
GCAAATTTTCTTGGCTTAAGTGCATTAGACTCAAACAAGTCAATTATTGGTTCTTCTGGG
GCCGTTCCAATTTTAGTAAGAACCCTAAAAAATTTGGACAAGACCAGCAGTTCCCAAGCA
ATGCAAGACTCTTTGAGAGCGCTATACAATCTTTCCATATTACCTTTGAACATTTCAGTA
ATTCTGGAAACTGATTTTGTCTCATTTCTGCTAAATACATTGGGGGACATGGAAGTGAGT
GAAAGAATCCTCTCAATTTTAAGCAATGTGGTATCTACCCCAGAAGGTAGAAAGGCTATC
AGCACTGTGCCAGATGCATTCCCTATTTTGATTGATGTTCTGAATTGGAATGACTCTACG
GGTTGCCAGGAGAAGGCATCTTATATCTTGATGGTAATGGCACACAAATCTTATGGAGAT
AGGCAGGCTATGATTGATGCTGGAATTGTATCTTCCCTACTTGAATTGTCTCTTTTAGGC
AGCACATTAGCACAAAAGAGGGCCTCCCGGATTTTGGAGTGTTTGAGGGTTGATAAAGGG
AAGCAGGTTTCAGAAAGTTATGGTGGCAGTTTGGGTAGCGTTGGAGTATCTGCTCCCATA
TGTGGATCATCTTCCTCATCTGCAGATCCAAATCTCAGTTCCAAGGAGGCTTTCGAGGAG
GAGGAAGACATGATGAGTGAGGAGAAAAAGGCAGTGAAGCAATTAGTCCAGCAGAGTTTG
CAGAATAACATGAGGAGAATTGTTAAGAGGGCCAATTTGCCGCAAGACTTTGTTCCATCG
GATCATTTCAAGGCACTCACATCAAGTTCAACTTCAAAGAGCTTACCATTTTGA

Peptide Sequence

PEP ID

VIT_04s0008g05830.t01
PEP Infomation

pep chromosome:12X:4:5420646:5423923:-1 gene:VIT_04s0008g05830 transcript:VIT_04s0008g05830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKCERNDVGSLVLNRAAGGGSFRLFSSSSGATFRKKVFDFVRCGGSRHFREDEVAGVQP
LPLAPEPAQERSEPRRKGSEKLSELLKNSWEGWGEEDGNAEETKRKTEAFEEVKRVVRDL
QVGEGVRKSGGAVEVRRRAKEDLEARTTLAMLGAIPPLVGMLDSEDQESQIASLYALLNL
GIGNDENKAAIVKAGAVHKMLKLIESPNELPNSAVSEAVVANFLGLSALDSNKSIIGSSG
AVPILVRTLKNLDKTSSSQAMQDSLRALYNLSILPLNISVILETDFVSFLLNTLGDMEVS
ERILSILSNVVSTPEGRKAISTVPDAFPILIDVLNWNDSTGCQEKASYILMVMAHKSYGD
RQAMIDAGIVSSLLELSLLGSTLAQKRASRILECLRVDKGKQVSESYGGSLGSVGVSAPI
CGSSSSSADPNLSSKEAFEEEEDMMSEEKKAVKQLVQQSLQNNMRRIVKRANLPQDFVPS
DHFKALTSSSTSKSLPF

Transcript Sequence

Transcript ID

VIT_04s0008g05830.t01
Transcript Infomation

cdna chromosome:12X:4:5420646:5423923:-1 gene:VIT_04s0008g05830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCACCTCATTTTCTACTTCCTCCCTATTTTTCTACTAATCCTCTGTGCAATGTAGACT
CTGAGTTTCGGAATGGCCAAGTGCGAGCGAAACGACGTCGGATCGTTAGTCCTCAACCGC
GCCGCTGGCGGTGGAAGTTTTCGTCTATTTTCGTCATCCTCCGGTGCGACATTTCGCAAG
AAAGTATTTGATTTCGTTCGTTGTGGTGGTTCCCGCCATTTCCGGGAAGATGAGGTGGCA
GGCGTTCAGCCCTTGCCGCTGGCTCCGGAGCCGGCGCAAGAGCGATCGGAGCCGAGGAGG
AAGGGATCGGAGAAGCTGTCGGAGCTGTTGAAGAATTCGTGGGAGGGTTGGGGTGAAGAG
GATGGGAATGCTGAAGAGACGAAGAGGAAGACTGAGGCGTTTGAGGAGGTGAAGCGCGTG
GTAAGGGATCTTCAGGTTGGGGAAGGAGTGAGGAAGAGTGGAGGTGCGGTGGAGGTGAGG
AGGCGTGCGAAGGAAGACTTGGAAGCTCGAACTACGCTCGCAATGCTCGGAGCCATTCCT
CCTCTGGTAGGGATGCTAGATTCTGAGGATCAGGAGTCTCAGATCGCGTCATTGTACGCT
CTTCTTAATCTCGGGATCGGAAACGATGAGAACAAAGCAGCCATTGTCAAAGCAGGAGCT
GTCCACAAGATGCTAAAGCTCATTGAATCTCCAAATGAACTCCCAAATTCAGCTGTCTCT
GAAGCAGTTGTCGCAAATTTTCTTGGCTTAAGTGCATTAGACTCAAACAAGTCAATTATT
GGTTCTTCTGGGGCCGTTCCAATTTTAGTAAGAACCCTAAAAAATTTGGACAAGACCAGC
AGTTCCCAAGCAATGCAAGACTCTTTGAGAGCGCTATACAATCTTTCCATATTACCTTTG
AACATTTCAGTAATTCTGGAAACTGATTTTGTCTCATTTCTGCTAAATACATTGGGGGAC
ATGGAAGTGAGTGAAAGAATCCTCTCAATTTTAAGCAATGTGGTATCTACCCCAGAAGGT
AGAAAGGCTATCAGCACTGTGCCAGATGCATTCCCTATTTTGATTGATGTTCTGAATTGG
AATGACTCTACGGGTTGCCAGGAGAAGGCATCTTATATCTTGATGGTAATGGCACACAAA
TCTTATGGAGATAGGCAGGCTATGATTGATGCTGGAATTGTATCTTCCCTACTTGAATTG
TCTCTTTTAGGCAGCACATTAGCACAAAAGAGGGCCTCCCGGATTTTGGAGTGTTTGAGG
GTTGATAAAGGGAAGCAGGTTTCAGAAAGTTATGGTGGCAGTTTGGGTAGCGTTGGAGTA
TCTGCTCCCATATGTGGATCATCTTCCTCATCTGCAGATCCAAATCTCAGTTCCAAGGAG
GCTTTCGAGGAGGAGGAAGACATGATGAGTGAGGAGAAAAAGGCAGTGAAGCAATTAGTC
CAGCAGAGTTTGCAGAATAACATGAGGAGAATTGTTAAGAGGGCCAATTTGCCGCAAGAC
TTTGTTCCATCGGATCATTTCAAGGCACTCACATCAAGTTCAACTTCAAAGAGCTTACCA
TTTTGAGAATATTTCGTCAATGTCAGACACAAATCCAGAAATTACAACCAAGGAGATGGA
GATTCGTGACCCAATTTGGATAGGAGGGGGAAGAATCTGAGCTGTTTGTGGTTAAAATAA
CTGTGTTCAGTTTTGTCCCCTCCAGGTATATATGTATCATATAATATCCATTGTGGGGTG
TAGCTAGTTTTTCCCTTTTTCTTTTTTCCTCCTCGTGAATCTTTAATTTTCCGTGGTC