Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g05580.t01
CDS Infomation

cds chromosome:12X:4:5060714:5066168:1 gene:VIT_04s0008g05580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTACCATTGATCTGGACGATATTGTGCCCAAGGTTTCACGATCTGCTGCTCTGCGT
TTCTCGCCATTGCTCGTTATCAATGGCCTTTCTCGGAAGGCTTCTTTCTATTGGAAGCTT
CCTCAACAGCCCATCAAGCTCTCTGTTCTCAAATTGGATGGCTCTTGTTTCCAAATTGAA
GTAACAAAGACATCAACTGTTGCAGAGCTCAAGCAGGCAGTGGAGGATGCCTTTAGTCAT
TTGCCGAAGAAGGGACCTGGAAAGATTTCATGGCTGCATGTTTGGGGCCATTTCTGCTTA
TGTTATAATGATCAGAAGCTAGTAACTGAAACCGAGTATATCAAAAACTATGGGATCAAA
GACGGTGATCAGGTGCAGCTTCATTTTGTCCGGCATCAATCAATCAACTATAACTTGAGA
AAAAGGCGACAAAAAAGGCGGTGTGGTGCTTTGACACAACCCAGAATATCAGATGGCTGT
GAAGAGAAAGAATCCAATGGCGAAGAAGATGATAATCAAGAGAATCAGAAGAAGGAAATT
TTCAGAAAACGGGAGAAGTTCAAATTGTCAATGTTATTGGGTGGTTGGTTCTCATACTCC
AAACTCACAAGCCCAGGAAGAAGGAAATATGAAGGCAAGACGAGTAAATCAAAATTTAGC
AGTGGCTTGTTGGGCAGTTTTAGAAAGATGGTACGGATTTACAATAAGAAATCCGCCTTC
TCAAAGAATGGCATGGAGAGAGGATTAATGGGGTCCAAGTAA

Peptide Sequence

PEP ID

VIT_04s0008g05580.t01
PEP Infomation

pep chromosome:12X:4:5060714:5066168:1 gene:VIT_04s0008g05580 transcript:VIT_04s0008g05580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPTIDLDDIVPKVSRSAALRFSPLLVINGLSRKASFYWKLPQQPIKLSVLKLDGSCFQIE
VTKTSTVAELKQAVEDAFSHLPKKGPGKISWLHVWGHFCLCYNDQKLVTETEYIKNYGIK
DGDQVQLHFVRHQSINYNLRKRRQKRRCGALTQPRISDGCEEKESNGEEDDNQENQKKEI
FRKREKFKLSMLLGGWFSYSKLTSPGRRKYEGKTSKSKFSSGLLGSFRKMVRIYNKKSAF
SKNGMERGLMGSK

Transcript Sequence

Transcript ID

VIT_04s0008g05580.t01
Transcript Infomation

cdna chromosome:12X:4:5060714:5066168:1 gene:VIT_04s0008g05580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAGATTCTCTATTGCTCTCCACGATAACCTCCGACACAAGCTGAAAAAGCAAAACCCTA
ACCCTAACTCCACCAAAACGATGCGTGTTCCTCTCTCTCAAGAATCTCTCTCCTCCTCTC
TCTTTTCTTCTTCTATAAATCCCGCCTCTCCTCCCTGAACCACATTGCTTCTCCTTCTAC
CCCATTCCAGCCGTGCCTTTTATTTTCACTCCTCCTATACTCTCCTTCACTTGTTACTAT
GCCTACCATTGATCTGGACGATATTGTGCCCAAGGTTTCACGATCTGCTGCTCTGCGTTT
CTCGCCATTGCTCGTTATCAATGGCCTTTCTCGGAAGGCTTCTTTCTATTGGAAGCTTCC
TCAACAGCCCATCAAGCTCTCTGTTCTCAAATTGGATGGCTCTTGTTTCCAAATTGAAGT
AACAAAGACATCAACTGTTGCAGAGCTCAAGCAGGCAGTGGAGGATGCCTTTAGTCATTT
GCCGAAGAAGGGACCTGGAAAGATTTCATGGCTGCATGTTTGGGGCCATTTCTGCTTATG
TTATAATGATCAGAAGCTAGTAACTGAAACCGAGTATATCAAAAACTATGGGATCAAAGA
CGGTGATCAGGTGCAGCTTCATTTTGTCCGGCATCAATCAATCAACTATAACTTGAGAAA
AAGGCGACAAAAAAGGCGGTGTGGTGCTTTGACACAACCCAGAATATCAGATGGCTGTGA
AGAGAAAGAATCCAATGGCGAAGAAGATGATAATCAAGAGAATCAGAAGAAGGAAATTTT
CAGAAAACGGGAGAAGTTCAAATTGTCAATGTTATTGGGTGGTTGGTTCTCATACTCCAA
ACTCACAAGCCCAGGAAGAAGGAAATATGAAGGCAAGACGAGTAAATCAAAATTTAGCAG
TGGCTTGTTGGGCAGTTTTAGAAAGATGGTACGGATTTACAATAAGAAATCCGCCTTCTC
AAAGAATGGCATGGAGAGAGGATTAATGGGGTCCAAGTAAAATGCACTACTGAGGGTATT
TGAATGGTTAAATTTCATCGGCTTCAAATTGGAAAGCTGTGTGCTGATGCTGTGTTGGAA
AGATCATACATGGAGAGAGGATAAGTTCAATTAAAATGCACATTTCTGAGACTGCCTGCC
TGGAGATTTTTGTTTTGTTCAACCATTCTTCAAATCAACAATATGCTATTGAAACTTCTC
TACTTGTTGAAATTTTGCTTACAAAGCAGAATGAATGTAAATGAGTAAGAGTTTGGTTGG
GTCTATACGGTTAATCATCCACTAGATGCTCTACTGGGATACCCTGAGCTGGTGTTTGGT
TTTTCTGTTTGGGCTAGAGTCACGAGGTGCATTATGCAGTATACCTGTGAAATAAAGGAA
ATTAATTACAAATCAC