Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g05560.t01
CDS Infomation

cds chromosome:12X:4:5035893:5039384:-1 gene:VIT_04s0008g05560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7SUV3]
Sequence

ATGGAACTTCAATTGGGTCTGGCACTTCCAGCCTACACTCCTGCAGTGAAGGTGGTGGAG
CTGAAAGGTTGTGGAAATGAGGCAAAGCAGAAGCTGGGTTCCCAGCCTTGGAGCTTTGGG
TGTGAAAGCTACATGAAAAACAAGCGTGGTTTTGGTGAGGCTTTTGAGAAAATTGAAGAT
CATGACCATGTGTCAGATGGGACTTCATTGCCTTTGCTATTGTGGCATGGCCAGCCAAAT
GACGAGGATGATCACAATGGTCTCGGGAAGAGAGCCTCTTGCCCCATTAACAAGAATGGT
GAGGAAGGAAATGCAGTTGTTGGGTGGCCACCAGTAAAATCATGGAGAAAGAAGGTGATC
TGCCAGCATCAAGGTGGTCGAATGGTGTTTGATCGGACGGCAGAGAAGGAAAGTGGTGGA
GCAGGCCCCATCTACGTGAAGGTGAAGATGGAGGGAGTGGCGATAGCGAGGAAGATCAAT
CTAAAGCTGTATCAGTCGTATCAGATGCTCAAAAACTCCTTGACTGCAATGTTTGCTCGG
TGCAAAAAATGTGACGTGGATTGTGTACACTACACTCTTACCTACCAAGACAAGGAGGGT
GATTGGCTGCTTGCCGGAGATGTTCCATGGAGAACATTCATCGAGTCTGTGCAGCGCCTG
GAGTTAGTAAGGAATGGAGGTTGA

Peptide Sequence

PEP ID

VIT_04s0008g05560.t01
PEP Infomation

pep chromosome:12X:4:5035893:5039384:-1 gene:VIT_04s0008g05560 transcript:VIT_04s0008g05560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7SUV3]
Sequence

MELQLGLALPAYTPAVKVVELKGCGNEAKQKLGSQPWSFGCESYMKNKRGFGEAFEKIED
HDHVSDGTSLPLLLWHGQPNDEDDHNGLGKRASCPINKNGEEGNAVVGWPPVKSWRKKVI
CQHQGGRMVFDRTAEKESGGAGPIYVKVKMEGVAIARKINLKLYQSYQMLKNSLTAMFAR
CKKCDVDCVHYTLTYQDKEGDWLLAGDVPWRTFIESVQRLELVRNGG

Transcript Sequence

Transcript ID

VIT_04s0008g05560.t01
Transcript Infomation

cdna chromosome:12X:4:5035893:5039384:-1 gene:VIT_04s0008g05560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7SUV3]
Sequence

AACTCCCATATCTCCCTCTCTTTCTCTCTCTCTCTCTTACTTGCTTTTTTCCATCTTATT
TTATTGTTGTTTGTGCTTTGTTTGTTGTTCTGGGGTATGGAACTTCAATTGGGTCTGGCA
CTTCCAGCCTACACTCCTGCAGTGAAGGTGGTGGAGCTGAAAGGTTGTGGAAATGAGGCA
AAGCAGAAGCTGGGTTCCCAGCCTTGGAGCTTTGGGTGTGAAAGCTACATGAAAAACAAG
CGTGGTTTTGGTGAGGCTTTTGAGAAAATTGAAGATCATGACCATGTGTCAGATGGGACT
TCATTGCCTTTGCTATTGTGGCATGGCCAGCCAAATGACGAGGATGATCACAATGGTCTC
GGGAAGAGAGCCTCTTGCCCCATTAACAAGAATGGTGAGGAAGGAAATGCAGTTGTTGGG
TGGCCACCAGTAAAATCATGGAGAAAGAAGGTGATCTGCCAGCATCAAGGTGGTCGAATG
GTGTTTGATCGGACGGCAGAGAAGGAAAGTGGTGGAGCAGGCCCCATCTACGTGAAGGTG
AAGATGGAGGGAGTGGCGATAGCGAGGAAGATCAATCTAAAGCTGTATCAGTCGTATCAG
ATGCTCAAAAACTCCTTGACTGCAATGTTTGCTCGGTGCAAAAAATGTGACGTGGATTGT
GTACACTACACTCTTACCTACCAAGACAAGGAGGGTGATTGGCTGCTTGCCGGAGATGTT
CCATGGAGAACATTCATCGAGTCTGTGCAGCGCCTGGAGTTAGTAAGGAATGGAGGTTGA
TGAAAGTGCAGGCAGATTTGCAGGCTGAGATCTGGATTTCCCAATTATGCTACTTTAGCT
AAACTATATAATGTATGATCTATGGATGTTAATTGTTAGCTTGAATAAGTGATTGTAGAA
AATGAGTGAAGTTTGCCTAGTTTATTACTTTAATTATTAGTTGCTTGTGACTTTCTACTG
TAACAAATATCCGATGCCTGAGTTGAGATTAGCATATATGTTTGCCTACTAAGAAAATTG
TGTAGTTCCCTTCTA