Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g05390.t01
CDS Infomation

cds chromosome:12X:4:4839707:4840639:-1 gene:VIT_04s0008g05390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCTTTATTGGAGAAGCATCAGCTTACTTCAAAGTTTTTTCTGATGGTTCAATAAAA
CGTGTGGAATGGGAAAGCGCCCCTGCCTCCAATGATTCATCATCCAATGGATATAAGTCC
AAGGATGTAATCATTAACTCAACCAAGCCAATATCTGCACGAATATTTCTGCCTGATGTT
CCGGGCTCCTCTGACCGGCTTCCAGTTCTAGTTTACTTCCATGGTGGCGGTTTCTGTTTA
GGCTCAACGACATGGCTTGGGTACCATACTTTCCTTGGAGACTTTGCGGTGGCTTCCCAA
TCAATAGTTCTTTCTGTGGACTACCGACATGCACCTGAAAACAGGCTCCCTATAGCTTAT
GATGATTGTTATAGTTCACTTGAGTGGCTAAGTTGCCAGGTGAGCTCTGAACCATGGCTT
CAGAGAGCTGACCTCTCTCGAGTGTTTCTCTCAGGGGACAGTGCTGGAGGAAACATCGTT
CACAATGTTGCTCTCAGAACAATTCAGGAACAATCTTGTGATCAAGTCAAGATTAAAGGG
TTGTTGCTAATACATCCTTTTTTTGGGAGCGAGGAGAGGATTGAGAAGGAGAGGGCCAGT
GGAGAAGCTGAGAATTTGGCATTAACCGACTGGATGTGGAAAGTAAGCTTGCCAGAAGGG
TCAAACCGAGACCATTATTGGTGTAACTATGAGATGGCAGAATTGTCCAGGGCTGAATGG
TGTCGGTTTCCACCAGCTGTGGTTTATGTGGCTGGTTTGGATTTCTTAAAAGAAAGGGGA
GTTATGTATGCAGCCTTTCTGGAGAAGAACGGGGTGGAGGTGAAGCTGGTGGAAGCCGAA
GGAGAGAAGCATGTGTATCATATGCTCCATCCTGAATCTGAGGCGACTCGTTTGCTTCAG
AAGCAAATGAGTGAGTTCATTCATAACTTTTAG

Peptide Sequence

PEP ID

VIT_04s0008g05390.t01
PEP Infomation

pep chromosome:12X:4:4839707:4840639:-1 gene:VIT_04s0008g05390 transcript:VIT_04s0008g05390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSFIGEASAYFKVFSDGSIKRVEWESAPASNDSSSNGYKSKDVIINSTKPISARIFLPDV
PGSSDRLPVLVYFHGGGFCLGSTTWLGYHTFLGDFAVASQSIVLSVDYRHAPENRLPIAY
DDCYSSLEWLSCQVSSEPWLQRADLSRVFLSGDSAGGNIVHNVALRTIQEQSCDQVKIKG
LLLIHPFFGSEERIEKERASGEAENLALTDWMWKVSLPEGSNRDHYWCNYEMAELSRAEW
CRFPPAVVYVAGLDFLKERGVMYAAFLEKNGVEVKLVEAEGEKHVYHMLHPESEATRLLQ
KQMSEFIHNF

Transcript Sequence

Transcript ID

VIT_04s0008g05390.t01
Transcript Infomation

cdna chromosome:12X:4:4839707:4840639:-1 gene:VIT_04s0008g05390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCTTTATTGGAGAAGCATCAGCTTACTTCAAAGTTTTTTCTGATGGTTCAATAAAA
CGTGTGGAATGGGAAAGCGCCCCTGCCTCCAATGATTCATCATCCAATGGATATAAGTCC
AAGGATGTAATCATTAACTCAACCAAGCCAATATCTGCACGAATATTTCTGCCTGATGTT
CCGGGCTCCTCTGACCGGCTTCCAGTTCTAGTTTACTTCCATGGTGGCGGTTTCTGTTTA
GGCTCAACGACATGGCTTGGGTACCATACTTTCCTTGGAGACTTTGCGGTGGCTTCCCAA
TCAATAGTTCTTTCTGTGGACTACCGACATGCACCTGAAAACAGGCTCCCTATAGCTTAT
GATGATTGTTATAGTTCACTTGAGTGGCTAAGTTGCCAGGTGAGCTCTGAACCATGGCTT
CAGAGAGCTGACCTCTCTCGAGTGTTTCTCTCAGGGGACAGTGCTGGAGGAAACATCGTT
CACAATGTTGCTCTCAGAACAATTCAGGAACAATCTTGTGATCAAGTCAAGATTAAAGGG
TTGTTGCTAATACATCCTTTTTTTGGGAGCGAGGAGAGGATTGAGAAGGAGAGGGCCAGT
GGAGAAGCTGAGAATTTGGCATTAACCGACTGGATGTGGAAAGTAAGCTTGCCAGAAGGG
TCAAACCGAGACCATTATTGGTGTAACTATGAGATGGCAGAATTGTCCAGGGCTGAATGG
TGTCGGTTTCCACCAGCTGTGGTTTATGTGGCTGGTTTGGATTTCTTAAAAGAAAGGGGA
GTTATGTATGCAGCCTTTCTGGAGAAGAACGGGGTGGAGGTGAAGCTGGTGGAAGCCGAA
GGAGAGAAGCATGTGTATCATATGCTCCATCCTGAATCTGAGGCGACTCGTTTGCTTCAG
AAGCAAATGAGTGAGTTCATTCATAACTTTTAG