Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g05170.t01
CDS Infomation

cds chromosome:12X:4:4666598:4674279:-1 gene:VIT_04s0008g05170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGAAGAAGTCATCGAAAGAAGTGGCTACTTCTCTTCAAGGAATGTTGGAGAAGTTG
ACTCCCCTGTCGACTACATGCTGTATATATAGAGTGCCACAGAAACTGCGGAAAGCAAAT
ATGGAAGCCTACACGCCTAGAGTAGTCTCCATCGGTCCCCTACATCATGGCGAAGAGCAC
TTGGTAGCCATGGAAGAGCATAAGCTGAGGTACCTCCAAAAATTTCTTTCTGAAACCCGC
AAAACCTTAGAGGAGTGTGTTGAAATTATATACAGGGAGGAGGAAAAGGCCCGAGGCTAT
TACATGGAAAGCATAAAGATGAGCAGAGAAGAATTTGTGAAGATGATTCTAGTGGATGCT
TGCTTCATCATTGAAGTGATCTTGGGCTTTTCCAGCAGTCATTCTATCGAAACAGGTGAT
CGGATATACAACAAGCCACGGTTGTTCATTGATGTGCGCCGCGACATGACCTTACTAGAA
AACCAGCTTCCATTCTTTCTTCTCCTCTCTCTCTACAGCCTGCGGGCTCCTCCAGGACCC
CTTCCAGAAAACCAAAATGACTACGCCCACTACTCATTCCTTCTCTTGTCTGTCAAATTC
TTCAAAGACTACTTGCAAATGCCAGAAGCCAAAAGTTCTGATGAAATAGTGACTGAAATT
AAGAAGAAGATCTCAAGTCGTCATGAGATAAAACACTTTGTTGATTTGCTAATAGTTTGT
CTGCAGCCTTCATCCTCTAGTCTACCACCAGAATCAAAGTCGTTCAAATTCGTGATACCT
ACTGCAACATATCTCCGTGAGGCGGGAGTGCGGTTTAAGTTGGGATCGAAAGACAAAGAC
AACGACAAATTACTTGATTTAGACTATAATAATGGTGTTCTGAAAATCCCACATCTGATA
CTGCAAGAAAAGTGTGAATCCTTGTTTCGAAACCTCATTGCCTACGAGGAATGTCACGAC
CATGCACAAACTTACATAACCGACTACATGTACCTCATGGATCACCTTATCAACACTACT
AAAGACGTTAACTTACTTGTTAGGAAGGGAATTATCAGTAACCATCTGGGCGACAACCAT
GCGGTTAAGAATCTATTTAACAGACTGCTAATTGATACGACAACATGTAAGGAGACCTTC
CATTTTGCAGGTATATATGAGAAGCTGAATAAATACTACGATAGTCCATGGAACCGTTGG
CAGGCAACATTGAGACATGACTATTTCAGTTCTCCATGGAGAGGAGCTTCTACAATTGCT
GCAGTTATACTCCTCGTACTCACTCTCATACAAACCGTATTTACATGGATGTCTGTTAAC
CTTCCGATAAGATTGAAAATGTTTATTACTTATTTATTGTCAGTAATATATGATTTTCCG
GGAAACACGAGGTTGAATTGGGAATTCAAAAGGTGTAAGGATAGGGCTGGACTAATTCTC
ATGTTGCTGGACTTGGATTATACTGTTAGATACAACCACACTGCACACACTGGTTAG

Peptide Sequence

PEP ID

VIT_04s0008g05170.t01
PEP Infomation

pep chromosome:12X:4:4666598:4674279:-1 gene:VIT_04s0008g05170 transcript:VIT_04s0008g05170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLKKSSKEVATSLQGMLEKLTPLSTTCCIYRVPQKLRKANMEAYTPRVVSIGPLHHGEEH
LVAMEEHKLRYLQKFLSETRKTLEECVEIIYREEEKARGYYMESIKMSREEFVKMILVDA
CFIIEVILGFSSSHSIETGDRIYNKPRLFIDVRRDMTLLENQLPFFLLLSLYSLRAPPGP
LPENQNDYAHYSFLLLSVKFFKDYLQMPEAKSSDEIVTEIKKKISSRHEIKHFVDLLIVC
LQPSSSSLPPESKSFKFVIPTATYLREAGVRFKLGSKDKDNDKLLDLDYNNGVLKIPHLI
LQEKCESLFRNLIAYEECHDHAQTYITDYMYLMDHLINTTKDVNLLVRKGIISNHLGDNH
AVKNLFNRLLIDTTTCKETFHFAGIYEKLNKYYDSPWNRWQATLRHDYFSSPWRGASTIA
AVILLVLTLIQTVFTWMSVNLPIRLKMFITYLLSVIYDFPGNTRLNWEFKRCKDRAGLIL
MLLDLDYTVRYNHTAHTG

Transcript Sequence

Transcript ID

VIT_04s0008g05170.t01
Transcript Infomation

cdna chromosome:12X:4:4666598:4674279:-1 gene:VIT_04s0008g05170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCAAACATTCAGAGAAAAACATCAACCATGTCATTTCAGGATAACAATTCTGTTAATAC
TTAATAGTGTTAAATATTAAGTTGTTTGTTTTTAGGAGAAGCTGGAAAAGAAGGCCATGG
TGAAATGTTGAAGAAGTCATCGAAAGAAGTGGCTACTTCTCTTCAAGGAATGTTGGAGAA
GTTGACTCCCCTGTCGACTACATGCTGTATATATAGAGTGCCACAGAAACTGCGGAAAGC
AAATATGGAAGCCTACACGCCTAGAGTAGTCTCCATCGGTCCCCTACATCATGGCGAAGA
GCACTTGGTAGCCATGGAAGAGCATAAGCTGAGGTACCTCCAAAAATTTCTTTCTGAAAC
CCGCAAAACCTTAGAGGAGTGTGTTGAAATTATATACAGGGAGGAGGAAAAGGCCCGAGG
CTATTACATGGAAAGCATAAAGATGAGCAGAGAAGAATTTGTGAAGATGATTCTAGTGGA
TGCTTGCTTCATCATTGAAGTGATCTTGGGCTTTTCCAGCAGTCATTCTATCGAAACAGG
TGATCGGATATACAACAAGCCACGGTTGTTCATTGATGTGCGCCGCGACATGACCTTACT
AGAAAACCAGCTTCCATTCTTTCTTCTCCTCTCTCTCTACAGCCTGCGGGCTCCTCCAGG
ACCCCTTCCAGAAAACCAAAATGACTACGCCCACTACTCATTCCTTCTCTTGTCTGTCAA
ATTCTTCAAAGACTACTTGCAAATGCCAGAAGCCAAAAGTTCTGATGAAATAGTGACTGA
AATTAAGAAGAAGATCTCAAGTCGTCATGAGATAAAACACTTTGTTGATTTGCTAATAGT
TTGTCTGCAGCCTTCATCCTCTAGTCTACCACCAGAATCAAAGTCGTTCAAATTCGTGAT
ACCTACTGCAACATATCTCCGTGAGGCGGGAGTGCGGTTTAAGTTGGGATCGAAAGACAA
AGACAACGACAAATTACTTGATTTAGACTATAATAATGGTGTTCTGAAAATCCCACATCT
GATACTGCAAGAAAAGTGTGAATCCTTGTTTCGAAACCTCATTGCCTACGAGGAATGTCA
CGACCATGCACAAACTTACATAACCGACTACATGTACCTCATGGATCACCTTATCAACAC
TACTAAAGACGTTAACTTACTTGTTAGGAAGGGAATTATCAGTAACCATCTGGGCGACAA
CCATGCGGTTAAGAATCTATTTAACAGACTGCTAATTGATACGACAACATGTAAGGAGAC
CTTCCATTTTGCAGGTATATATGAGAAGCTGAATAAATACTACGATAGTCCATGGAACCG
TTGGCAGGCAACATTGAGACATGACTATTTCAGTTCTCCATGGAGAGGAGCTTCTACAAT
TGCTGCAGTTATACTCCTCGTACTCACTCTCATACAAACCGTATTTACATGGATGTCTGT
TAACCTTCCGATAAGATTGAAAATGTTTATTACTTATTTATTGTCAGTAATATATGATTT
TCCGGGAAACACGAGGTTGAATTGGGAATTCAAAAGGTGTAAGGATAGGGCTGGACTAAT
TCTCATGTTGCTGGACTTGGATTATACTGTTAGATACAACCACACTGCACACACTGGTTA
G