Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g04960.t01
CDS Infomation

cds chromosome:12X:4:4451360:4455011:-1 gene:VIT_04s0008g04960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGCGCTCTTCTTGCTCCCGAAGCATCGCTTTCTTCTCTCTCTCACTTCCCTCTTC
CACACCAACCCTAACCCTAACCTTAATTTTCAAAGACCACCATTTCACAAGCTCATCAAT
AGGCCTCCATCATATCGCCATTGGGACCTGCCAATCCCCACTCTCAAGCAATCCCTAAAC
CCTAACCCTAACCCTAATTTTTCTCAGTCTGACTTCTCCACCATTTGCGCTCTTCTCACT
GACCCCGCTCTCTCTTCCGGTGCGCCTCTCGAAGATGCTTTGAACCGGACAGGAATTAAG
CCTTGTTCGGGTCTGTTGCAAGCCATTTTCAGCCATTTTGATGCATCTCCCAAGCCTTTG
TTCACTCTCTTTCGCTGGGCTATGAAGCAGCCTGGGTTTGAATCCTCTATGACTCTCTTC
AACTCCATGATCGATGTGCTTGCGAAATCGCGGGCTTTCGATTCCGCGTGGTTACTGGTG
CTTGATCGTATAGAGGGTGGAGAGGAACCTGAATTGGTTTCGAGCAATACATTTGCAGTA
CTGATAAGGCGGTATGCTCGCGCAGGTATGACCTTATCTGCCATTCGGACATTTGAATTT
GCATTTAGTTTAGATTCGATTAGGGACCGAGATTCAGAATGGAGTTTGTTTAAGATTCTA
TTGGATTCTCTCTGTAAGGAAGGGCATGTTAGAGTAGCTTCTGAATATTTTGATCAACAA
AGAGGACTGGACCCGAGTTGGGTTCCTTCAATTCGAGTATATAATGTATTATTGAATGGT
TGGTTTCGATCAAGGAAGCTCAAGCGTGCAGAGCAGCTTTGGAGAACGATGAAGAGGGAA
AATGTGAAACCGACTGTTGTAACATACGGTACCCTTGTTGAAGGGTATTGCCGGATGCGA
CGTTCTGAGAAGGCAATTGAATTAGTGGGTGAGATGAGGGGGAAAGGAATTGAGCCAAAT
GTAATTGTATATAATCCAATAATTGATTCATTAGCAGAAGCAGGGAGGTTTAAGGAGGCG
ATGGGGATGATGGAACGATGTTTGGTTTCAGAGACAGGTCCCACTATTTCAACATACAAT
TCTTTAGTGAAGGGTTTTTGCAAGGCAGGAGATCTAGTAGGTGCGAGTAAGGTACTCAAG
ATGATGATTAGTAGGGGTTTTGACCCAACTCTGACAACTTATAATTACTTTTTTCGGTAC
TTCTCAAGATGTGGGAAAACTGAAGAGGGGATGAACCTTTATACCAAGATGATTGAATCT
GGACATACCCCAGATCGGCTCACTTACCATCTGTTGATTAAGATGATGTGTGAGGAGGAA
AGATTGGACTTGGCAGTGCAAGTTAGCAAGGAAATGAGAGCTAGGGGATGCGATTTGGAC
TTGGCTACAAGCACCATGCTGGTCCATTTACTGTGCAAAATGCATAGACTGGAAGAGGCT
TTTGCAGAGTTTGAAGACATGATTCGAAGAGGAATTGTTCCTCAGTACCTTACTTTTGAG
AGAATGAATAATGCACTAAGAAAACGAGGATTGACTGAAATGGCACGGAAATTATGTGAT
ATGATGGCATCTGTCCCTCATTCATCAAAGTTACCAAATACATATTCTGGAGATGGAGAT
GCATCACGGGCAAGGAAAACAAGTATAATACAGAGGGCCGAAGCAATGTCTGATATTTTG
AAGACTTGTAATGATCCGAGAGAACTTGTTAAACGTAGAAGTTCATTTGAAAATACTGTA
TTGGTTGCAGACCAGTTGATAGAGGATATCAAGAGAAGAGCTAACAAGACATGA

Peptide Sequence

PEP ID

VIT_04s0008g04960.t01
PEP Infomation

pep chromosome:12X:4:4451360:4455011:-1 gene:VIT_04s0008g04960 transcript:VIT_04s0008g04960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKALFLLPKHRFLLSLTSLFHTNPNPNLNFQRPPFHKLINRPPSYRHWDLPIPTLKQSLN
PNPNPNFSQSDFSTICALLTDPALSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPL
FTLFRWAMKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAV
LIRRYARAGMTLSAIRTFEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQ
RGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMR
RSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYN
SLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIES
GHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEA
FAEFEDMIRRGIVPQYLTFERMNNALRKRGLTEMARKLCDMMASVPHSSKLPNTYSGDGD
ASRARKTSIIQRAEAMSDILKTCNDPRELVKRRSSFENTVLVADQLIEDIKRRANKT

Transcript Sequence

Transcript ID

VIT_04s0008g04960.t01
Transcript Infomation

cdna chromosome:12X:4:4451360:4455011:-1 gene:VIT_04s0008g04960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGCATTATGCCGCCGTCGATCCTCCAACATTTGAGGAGGAACGTTAAAAAATGGAGGGC
TACTAAAATTGTCTGCAACTACAATGAAAGCGCTCTTCTTGCTCCCGAAGCATCGCTTTC
TTCTCTCTCTCACTTCCCTCTTCCACACCAACCCTAACCCTAACCTTAATTTTCAAAGAC
CACCATTTCACAAGCTCATCAATAGGCCTCCATCATATCGCCATTGGGACCTGCCAATCC
CCACTCTCAAGCAATCCCTAAACCCTAACCCTAACCCTAATTTTTCTCAGTCTGACTTCT
CCACCATTTGCGCTCTTCTCACTGACCCCGCTCTCTCTTCCGGTGCGCCTCTCGAAGATG
CTTTGAACCGGACAGGAATTAAGCCTTGTTCGGGTCTGTTGCAAGCCATTTTCAGCCATT
TTGATGCATCTCCCAAGCCTTTGTTCACTCTCTTTCGCTGGGCTATGAAGCAGCCTGGGT
TTGAATCCTCTATGACTCTCTTCAACTCCATGATCGATGTGCTTGCGAAATCGCGGGCTT
TCGATTCCGCGTGGTTACTGGTGCTTGATCGTATAGAGGGTGGAGAGGAACCTGAATTGG
TTTCGAGCAATACATTTGCAGTACTGATAAGGCGGTATGCTCGCGCAGGTATGACCTTAT
CTGCCATTCGGACATTTGAATTTGCATTTAGTTTAGATTCGATTAGGGACCGAGATTCAG
AATGGAGTTTGTTTAAGATTCTATTGGATTCTCTCTGTAAGGAAGGGCATGTTAGAGTAG
CTTCTGAATATTTTGATCAACAAAGAGGACTGGACCCGAGTTGGGTTCCTTCAATTCGAG
TATATAATGTATTATTGAATGGTTGGTTTCGATCAAGGAAGCTCAAGCGTGCAGAGCAGC
TTTGGAGAACGATGAAGAGGGAAAATGTGAAACCGACTGTTGTAACATACGGTACCCTTG
TTGAAGGGTATTGCCGGATGCGACGTTCTGAGAAGGCAATTGAATTAGTGGGTGAGATGA
GGGGGAAAGGAATTGAGCCAAATGTAATTGTATATAATCCAATAATTGATTCATTAGCAG
AAGCAGGGAGGTTTAAGGAGGCGATGGGGATGATGGAACGATGTTTGGTTTCAGAGACAG
GTCCCACTATTTCAACATACAATTCTTTAGTGAAGGGTTTTTGCAAGGCAGGAGATCTAG
TAGGTGCGAGTAAGGTACTCAAGATGATGATTAGTAGGGGTTTTGACCCAACTCTGACAA
CTTATAATTACTTTTTTCGGTACTTCTCAAGATGTGGGAAAACTGAAGAGGGGATGAACC
TTTATACCAAGATGATTGAATCTGGACATACCCCAGATCGGCTCACTTACCATCTGTTGA
TTAAGATGATGTGTGAGGAGGAAAGATTGGACTTGGCAGTGCAAGTTAGCAAGGAAATGA
GAGCTAGGGGATGCGATTTGGACTTGGCTACAAGCACCATGCTGGTCCATTTACTGTGCA
AAATGCATAGACTGGAAGAGGCTTTTGCAGAGTTTGAAGACATGATTCGAAGAGGAATTG
TTCCTCAGTACCTTACTTTTGAGAGAATGAATAATGCACTAAGAAAACGAGGATTGACTG
AAATGGCACGGAAATTATGTGATATGATGGCATCTGTCCCTCATTCATCAAAGTTACCAA
ATACATATTCTGGAGATGGAGATGCATCACGGGCAAGGAAAACAAGTATAATACAGAGGG
CCGAAGCAATGTCTGATATTTTGAAGACTTGTAATGATCCGAGAGAACTTGTTAAACGTA
GAAGTTCATTTGAAAATACTGTATTGGTTGCAGACCAGTTGATAGAGGATATCAAGAGAA
GAGCTAACAAGACATGAGGCTTTTTTTAAGCCTAGAGTTCAACATCCACATGAAAGGACT
CTTTAAATGCCTTTTCAAATTGGGTGACTTTAGTCAGTCACCTGTAGTTTGGTTTTGGAG
AGCTTTATATGTTGTAACTTGTGTCAGACTATGCAATGCTGAATTAGACTGCGACCATCT
CCATTCATTTCTTTTTATGAGTTTCAACAAATAACAGTGAATTTCTTGTGGAGGCCTGGT
TCCGTAATCTTTCAATTTTGTCTAAGGGAAAACACAAACCATGTTAAACGGTCCCCTGAT
TGCAAGTGAAATTGTTCACTGTTCTTTTCCCACTTCTATTTGTATCTCTTTTGGTCGTGT
GTTATGATGTTCAATTACTTATTGGAAGCTATTATTGATTTATTTATCATAAGCTTCTTT
GGCATGCAACAAAAAAAGACAAACTTGTTAAGGAGGAGGCAACTTCCTGGGAAGCAGAAG
AATACCTACTCATCCTTGGTTCTAAGTGGCTG