Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g04710.t01
CDS Infomation

cds chromosome:12X:4:4158184:4159738:-1 gene:VIT_04s0008g04710 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6H3S9]
Sequence

ATGTCGGAAACAAATCCAAACACACCCTTGATTCCACCATCGCCATCCCGAAAGCTTCCC
GATTTCAAAAAGTCTGTGAAATTGAAATACGTGAAACTTGGCTACCATTACCTCATTACC
CATGGCATGTACCTTTTCCTATCGCCTCTCATTGTCCTCATTGCTGCCCAGCTCTCCACA
TTCTCTCTCCAAGATCTCCATGATCTCTGGGAAAATCTTAAATTCAATCTCATTTCAGTG
ATCCTTTGCTCGGCTCTCCTTGTCTTTTTATCGACCCTCTTTGTCCTTACTCGTCCTCGC
CCTGTTTATCTAGTTGATTTCTCGTGCTATAAGCCTGATGATGCTAGGAAATGTTCTAGG
CAGATTTTCATGGATCGGTCCAAGCAGATTGGTTCATTTACAGAGGAAAATATTGAGTTT
CAAAAGAAAATTATCGAGAGATCAGGGCTTGGGGAGTCAACTTACCTCCCTGAGGCTGTT
ATCAATGTTCCACCAAATCCATCAATGGCAGAAGCCAGAAAAGAAGCTGAGATGGTGATG
TTTGGGGCACTTGATCAGCTTTTTGAAAAGACGATGGTGAAACCGAAAGATATTGGGATT
TTGATTGTGAATTGTAGTTTGTTTAATCCGACTCCGTCTCTTTCAGCAATGGTCATTAAC
CATTATAAGCTTCGAGGGAATATTATTAGCTATAATCTAGGTGGGATGGGCTGTAGTGCT
GGTTTGATATCAATTGATCTTGCCAAAAATCTCCTTCAAGTTCATCCTAATTCCTATGCT
TTGGTCATTAGCATGGAAAACATCACTTTGAATTGGTACTTTGGGAATGAGAGGTCAATG
CTTGTTTCAAATTGTTTGTTCAGAATGGGGGGTGCTGCCATTTTGCTTTCAAACAAGTGG
TCTGACAGGCGACGATCCAAGTATCAGTTGGTTCATACTGTTCGAACCCACAAAGGTTCT
GATGATAAGTGTTTTGCTTGTGTTACCCAAAAGGAGGATTCCAATGGGAAGATCGGAGTG
TCTTTGTCGAAGGATTTGATGGCTGTTGCTGGAGATGCTTTGAAGACTAATATCACTACC
TTGGGTCCTCTTGTGCTGCCGATGTCTGAACAGCTGCTTTTCTTTGCCACATTGGTAGGG
AAAAAGGTTTTCAAGATGAAGGTGAAGCCCTATATTCCAGACTTCAAACTGGCTTTCGAG
CATTTTTGCATTCATGCTGGAGGAAGAGCTGTGCTGGATGAATTAGAGAAAAACTTGCAG
CTTTCGGATTGGCATATGGAACCTTCGAGGATGACCCTCTACCGGTTTGGCAACACTTCA
AGCAGCTCTCTTTGGTATGAATTGGCTTATACAGAAGCCAAAGGGAGGGTGAAGAAGGGA
GACAGAACATGGCAGATAGCATTTGGCTCTGGATTCAAATGTAACAGTGCAATTTGGAAG
GCTCTTCGGACTGTGAATCCAGCAAAGGAGAAGAACCCATGGATGGATGAGATACACTGG
TTCCCAGTGGATGTTCCAATGGTCTCAACCCTCTAG

Peptide Sequence

PEP ID

VIT_04s0008g04710.t01
PEP Infomation

pep chromosome:12X:4:4158184:4159738:-1 gene:VIT_04s0008g04710 transcript:VIT_04s0008g04710.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6H3S9]
Sequence

MSETNPNTPLIPPSPSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLIVLIAAQLST
FSLQDLHDLWENLKFNLISVILCSALLVFLSTLFVLTRPRPVYLVDFSCYKPDDARKCSR
QIFMDRSKQIGSFTEENIEFQKKIIERSGLGESTYLPEAVINVPPNPSMAEARKEAEMVM
FGALDQLFEKTMVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSA
GLISIDLAKNLLQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKW
SDRRRSKYQLVHTVRTHKGSDDKCFACVTQKEDSNGKIGVSLSKDLMAVAGDALKTNITT
LGPLVLPMSEQLLFFATLVGKKVFKMKVKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQ
LSDWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRVKKGDRTWQIAFGSGFKCNSAIWK
ALRTVNPAKEKNPWMDEIHWFPVDVPMVSTL

Transcript Sequence

Transcript ID

VIT_04s0008g04710.t01
Transcript Infomation

cdna chromosome:12X:4:4158184:4159738:-1 gene:VIT_04s0008g04710 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6H3S9]
Sequence

AATTCACTCCAAAATGTCGGAAACAAATCCAAACACACCCTTGATTCCACCATCGCCATC
CCGAAAGCTTCCCGATTTCAAAAAGTCTGTGAAATTGAAATACGTGAAACTTGGCTACCA
TTACCTCATTACCCATGGCATGTACCTTTTCCTATCGCCTCTCATTGTCCTCATTGCTGC
CCAGCTCTCCACATTCTCTCTCCAAGATCTCCATGATCTCTGGGAAAATCTTAAATTCAA
TCTCATTTCAGTGATCCTTTGCTCGGCTCTCCTTGTCTTTTTATCGACCCTCTTTGTCCT
TACTCGTCCTCGCCCTGTTTATCTAGTTGATTTCTCGTGCTATAAGCCTGATGATGCTAG
GAAATGTTCTAGGCAGATTTTCATGGATCGGTCCAAGCAGATTGGTTCATTTACAGAGGA
AAATATTGAGTTTCAAAAGAAAATTATCGAGAGATCAGGGCTTGGGGAGTCAACTTACCT
CCCTGAGGCTGTTATCAATGTTCCACCAAATCCATCAATGGCAGAAGCCAGAAAAGAAGC
TGAGATGGTGATGTTTGGGGCACTTGATCAGCTTTTTGAAAAGACGATGGTGAAACCGAA
AGATATTGGGATTTTGATTGTGAATTGTAGTTTGTTTAATCCGACTCCGTCTCTTTCAGC
AATGGTCATTAACCATTATAAGCTTCGAGGGAATATTATTAGCTATAATCTAGGTGGGAT
GGGCTGTAGTGCTGGTTTGATATCAATTGATCTTGCCAAAAATCTCCTTCAAGTTCATCC
TAATTCCTATGCTTTGGTCATTAGCATGGAAAACATCACTTTGAATTGGTACTTTGGGAA
TGAGAGGTCAATGCTTGTTTCAAATTGTTTGTTCAGAATGGGGGGTGCTGCCATTTTGCT
TTCAAACAAGTGGTCTGACAGGCGACGATCCAAGTATCAGTTGGTTCATACTGTTCGAAC
CCACAAAGGTTCTGATGATAAGTGTTTTGCTTGTGTTACCCAAAAGGAGGATTCCAATGG
GAAGATCGGAGTGTCTTTGTCGAAGGATTTGATGGCTGTTGCTGGAGATGCTTTGAAGAC
TAATATCACTACCTTGGGTCCTCTTGTGCTGCCGATGTCTGAACAGCTGCTTTTCTTTGC
CACATTGGTAGGGAAAAAGGTTTTCAAGATGAAGGTGAAGCCCTATATTCCAGACTTCAA
ACTGGCTTTCGAGCATTTTTGCATTCATGCTGGAGGAAGAGCTGTGCTGGATGAATTAGA
GAAAAACTTGCAGCTTTCGGATTGGCATATGGAACCTTCGAGGATGACCCTCTACCGGTT
TGGCAACACTTCAAGCAGCTCTCTTTGGTATGAATTGGCTTATACAGAAGCCAAAGGGAG
GGTGAAGAAGGGAGACAGAACATGGCAGATAGCATTTGGCTCTGGATTCAAATGTAACAG
TGCAATTTGGAAGGCTCTTCGGACTGTGAATCCAGCAAAGGAGAAGAACCCATGGATGGA
TGAGATACACTGGTTCCCAGTGGATGTTCCAATGGTCTCAACCCTCTAGAATCCA