Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g03640.t01
CDS Infomation

cds chromosome:12X:4:2989470:2992277:1 gene:VIT_04s0008g03640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGCCGCCGTCACCGGTGCAGTGCAACGGCAGTGCTGGTTGCATCCTGAGAAACTCC
TACGGTGAGTGGGGAGATCGAAAGGATTGTCGGGTTCTGAGCATTGCGTACCCTGAAACT
GAAGAGGAGATGAGGCTGGCAGTGGCGCAGGCTAATCAGAAGAAGCAGAAGGTGAAAGTT
GTTAGTGGGTTTTCACATACGATACCGAAACTGGCTTGTCCTGGGAAGGAATATTATTCT
GGAAATGCAGTATTAATAAGCACAGCCAAGTTGAAATCTACCATTGAAATTGATACCGCC
GAGATGGTTGTGACTGCAGACTCCGGGGTGGGGCTCCGGGATCTGATCAATAGAGTGGAA
GCGGCTGGGCTGAGCCTGGTGGCGGCGCCGTATTGGGAGGGGTTAAGTGTTGGTGGGCTG
ATTAGTACTGGAGCTCATGGGAGCTCATGGTGGGGGAAAGGTGGGGCGGTTCATGATCAT
GTTGTTGGCCTCAGCCTTGTGGTTCCTGCTAAAGAATCCGAAGGATTCGCCAAGATTATC
AGATTGGAAGCTCAAGATCCGCTTCTCAATGCAGCAAAAGTTTCAATGGGGATATTGGGC
GCCATCTCTAAGGTGAAATTGTCACTGGAGCCAGGATTCAAAAGAAGCATAACCAATAAC
TTCACAGACGATGCTCATTTTGAAGATGAATTCATGGACCATGCAAAGAAACATGAATTT
GCAGACATAACATGGTATCCATCAAGACGCACAGCTGTGTACAGATATGATGATAGAGTT
CCTCTGAACACATCTGGTGATGGAATCAATGACTTCCTGGGCTTTCAATCCAATTCTATT
CTGACCTCCAAATTGCTTCGAGCAGCAGAGAAAGCACTGGAAAATTCGCGAAGCGTGAGG
GGAAAATGTGCCACGGCATCCACAGTTTTGGCTTATAAGAGACTAGTGGCCAATGGGTTG
AAGAACAACAACCTAATCTTCACAGGCTATCCAGTGGTGGGTCATCAAGGGAAGATGCAG
ACCTCTGGTTCTTGCCTGTACTCGCCTTCAACTAGGACTGATATCACATGTGCTTGGGAT
CCAAGAATCAACGGCCTGTTCTTCTATGAGACAACGGCCATATTCCCAGCTACAAAATTC
GCTGAATTCATCCGTGAAGTTAAGACACTGAGAGAACTAAAAATCGATAACTTTTGTGGG
GTGGATATGTATAACGGGTTTTTGATTCGTTTCATCAAGGCTTCTGGGGCATACTTAGGA
CAAGCCGAGGACTCTGTGGTAGTAGACTTCAACTATTACCGCGCAGACAATGCTTCAACT
CCAAGACTGAACCAAGATGTGTGGGAAGAAGTGGAGCAAATGGCATTCTTCAAGTATGGG
GCTAAGCCACATTGGGCTAAGAATAGGAACTTGGCATTCTTGGGGGTGCAGAAAAAGTAT
CCCAATTTTAACAAGTTTGTTGCAGCCAAGAAACAACTTGATCCTCAGAACATTTTCTCT
AGTGATTGGTCTGAGGCTATACTATTTGGGAAAGAAGCAGAGAAAGGGGATGGATGCGCC
TTGGAAGGACAATGCATATGTTCAGGAGACCGCCATTGCAGCCCGGAGAAAGGGTACTTC
TGCAGAACTGGGCTTGTTTACAAGGAAGCTAGGGTCTGCAGGTACTCACCATCTTCCATA
GCATGGACATTTTCTAATTGA

Peptide Sequence

PEP ID

VIT_04s0008g03640.t01
PEP Infomation

pep chromosome:12X:4:2989470:2992277:1 gene:VIT_04s0008g03640 transcript:VIT_04s0008g03640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPPPSPVQCNGSAGCILRNSYGEWGDRKDCRVLSIAYPETEEEMRLAVAQANQKKQKVKV
VSGFSHTIPKLACPGKEYYSGNAVLISTAKLKSTIEIDTAEMVVTADSGVGLRDLINRVE
AAGLSLVAAPYWEGLSVGGLISTGAHGSSWWGKGGAVHDHVVGLSLVVPAKESEGFAKII
RLEAQDPLLNAAKVSMGILGAISKVKLSLEPGFKRSITNNFTDDAHFEDEFMDHAKKHEF
ADITWYPSRRTAVYRYDDRVPLNTSGDGINDFLGFQSNSILTSKLLRAAEKALENSRSVR
GKCATASTVLAYKRLVANGLKNNNLIFTGYPVVGHQGKMQTSGSCLYSPSTRTDITCAWD
PRINGLFFYETTAIFPATKFAEFIREVKTLRELKIDNFCGVDMYNGFLIRFIKASGAYLG
QAEDSVVVDFNYYRADNASTPRLNQDVWEEVEQMAFFKYGAKPHWAKNRNLAFLGVQKKY
PNFNKFVAAKKQLDPQNIFSSDWSEAILFGKEAEKGDGCALEGQCICSGDRHCSPEKGYF
CRTGLVYKEARVCRYSPSSIAWTFSN

Transcript Sequence

Transcript ID

VIT_04s0008g03640.t01
Transcript Infomation

cdna chromosome:12X:4:2989470:2992277:1 gene:VIT_04s0008g03640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCCATGGCATGCCGCCGCCGTCACCGGTGCAGTGCAACGGCAGTGCTGGTTGCATCCTG
AGAAACTCCTACGGTGAGTGGGGAGATCGAAAGGATTGTCGGGTTCTGAGCATTGCGTAC
CCTGAAACTGAAGAGGAGATGAGGCTGGCAGTGGCGCAGGCTAATCAGAAGAAGCAGAAG
GTGAAAGTTGTTAGTGGGTTTTCACATACGATACCGAAACTGGCTTGTCCTGGGAAGGAA
TATTATTCTGGAAATGCAGTATTAATAAGCACAGCCAAGTTGAAATCTACCATTGAAATT
GATACCGCCGAGATGGTTGTGACTGCAGACTCCGGGGTGGGGCTCCGGGATCTGATCAAT
AGAGTGGAAGCGGCTGGGCTGAGCCTGGTGGCGGCGCCGTATTGGGAGGGGTTAAGTGTT
GGTGGGCTGATTAGTACTGGAGCTCATGGGAGCTCATGGTGGGGGAAAGGTGGGGCGGTT
CATGATCATGTTGTTGGCCTCAGCCTTGTGGTTCCTGCTAAAGAATCCGAAGGATTCGCC
AAGATTATCAGATTGGAAGCTCAAGATCCGCTTCTCAATGCAGCAAAAGTTTCAATGGGG
ATATTGGGCGCCATCTCTAAGGTGAAATTGTCACTGGAGCCAGGATTCAAAAGAAGCATA
ACCAATAACTTCACAGACGATGCTCATTTTGAAGATGAATTCATGGACCATGCAAAGAAA
CATGAATTTGCAGACATAACATGGTATCCATCAAGACGCACAGCTGTGTACAGATATGAT
GATAGAGTTCCTCTGAACACATCTGGTGATGGAATCAATGACTTCCTGGGCTTTCAATCC
AATTCTATTCTGACCTCCAAATTGCTTCGAGCAGCAGAGAAAGCACTGGAAAATTCGCGA
AGCGTGAGGGGAAAATGTGCCACGGCATCCACAGTTTTGGCTTATAAGAGACTAGTGGCC
AATGGGTTGAAGAACAACAACCTAATCTTCACAGGCTATCCAGTGGTGGGTCATCAAGGG
AAGATGCAGACCTCTGGTTCTTGCCTGTACTCGCCTTCAACTAGGACTGATATCACATGT
GCTTGGGATCCAAGAATCAACGGCCTGTTCTTCTATGAGACAACGGCCATATTCCCAGCT
ACAAAATTCGCTGAATTCATCCGTGAAGTTAAGACACTGAGAGAACTAAAAATCGATAAC
TTTTGTGGGGTGGATATGTATAACGGGTTTTTGATTCGTTTCATCAAGGCTTCTGGGGCA
TACTTAGGACAAGCCGAGGACTCTGTGGTAGTAGACTTCAACTATTACCGCGCAGACAAT
GCTTCAACTCCAAGACTGAACCAAGATGTGTGGGAAGAAGTGGAGCAAATGGCATTCTTC
AAGTATGGGGCTAAGCCACATTGGGCTAAGAATAGGAACTTGGCATTCTTGGGGGTGCAG
AAAAAGTATCCCAATTTTAACAAGTTTGTTGCAGCCAAGAAACAACTTGATCCTCAGAAC
ATTTTCTCTAGTGATTGGTCTGAGGCTATACTATTTGGGAAAGAAGCAGAGAAAGGGGAT
GGATGCGCCTTGGAAGGACAATGCATATGTTCAGGAGACCGCCATTGCAGCCCGGAGAAA
GGGTACTTCTGCAGAACTGGGCTTGTTTACAAGGAAGCTAGGGTCTGCAGGTACTCACCA
TCTTCCATAGCATGGACATTTTCTAATTGATTTTGTGTCATATAGTAGGTGATCAAATGT
GCTGATAG