Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g03080.t01
CDS Infomation

cds chromosome:12X:4:2549518:2554774:-1 gene:VIT_04s0008g03080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTGCCACCCTCTGCTCCTTCAATTTAATGTTTTCTATGGAGAAGAGGGCATCACCA
GAGATTTCATCAGCCGAGTCCCATCAATTTATCGAAAATTGGATCCAGGTTCAAGACTCT
CTCAAGAGAAGATTGGTCACAGAAGATGATTTCACATGGAAACTGCCCAAACCCACATCG
ACAGCCACGGTCAGAGGAAGAATTGAAGAAGGTGACGACAAGCATGTGTTGAAGTATGTG
GGTGGAGTTGATGTGAGCTTCTCAAAGGATGATCCGTCGGTTGCGTGTGGGACTATTGTC
GTTTTGGATCTCGGCACTTTGGAAGTTGTATACGATGACTACTCTGTTGTTAGGCTTCAA
ACCCCATATGTTCCTGGCTTCCTTGCCTTAAGAGAGGCTCCAGTTCTTTTAAAGCTTTTG
GAGAAAATGAAGAACAGTGCCCATCCTTTCTACCCACAGTTGCTAATGGTTGATGGCAAT
GGTTTACTTCATCCTCGAGGCAAGTGCACTTTTACCAGTTTTGGCTTGGCTTGTCATCTG
GGCGTTCTGGCTAATATTCCAACAATTGGGATAGGGAAAACTTTGCATCATGTGGATGGT
CTTACTCAATCTGGAGTGAGAGAACTTCTTGAAGCCAAAGGAAACTTGACTGAAGATTTT
ATTGCTTTAACAGGATACTCTGGCCGGACATTGGGAGTGGCAATGAGGTCAACTGAGAGC
TCATTGAAGCCGATATTTGTTTCAATTGGTCACCGTGTATCACTTGACACAGCCATCATA
ATTATTAAAATGACTTGCAATTATCGTGTGCCAGAGCCCGTTCGGCAGGCTGATATAAGA
TCAAGACAATACCTCCAGAAGCATCAATGGCGTTAA

Peptide Sequence

PEP ID

VIT_04s0008g03080.t01
PEP Infomation

pep chromosome:12X:4:2549518:2554774:-1 gene:VIT_04s0008g03080 transcript:VIT_04s0008g03080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTATLCSFNLMFSMEKRASPEISSAESHQFIENWIQVQDSLKRRLVTEDDFTWKLPKPTS
TATVRGRIEEGDDKHVLKYVGGVDVSFSKDDPSVACGTIVVLDLGTLEVVYDDYSVVRLQ
TPYVPGFLALREAPVLLKLLEKMKNSAHPFYPQLLMVDGNGLLHPRGKCTFTSFGLACHL
GVLANIPTIGIGKTLHHVDGLTQSGVRELLEAKGNLTEDFIALTGYSGRTLGVAMRSTES
SLKPIFVSIGHRVSLDTAIIIIKMTCNYRVPEPVRQADIRSRQYLQKHQWR

Transcript Sequence

Transcript ID

VIT_04s0008g03080.t01
Transcript Infomation

cdna chromosome:12X:4:2549518:2554774:-1 gene:VIT_04s0008g03080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTGCCACCCTCTGCTCCTTCAATTTAATGTTTTCTATGGAGAAGAGGGCATCACCA
GAGATTTCATCAGCCGAGTCCCATCAATTTATCGAAAATTGGATCCAGGTTCAAGACTCT
CTCAAGAGAAGATTGGTCACAGAAGATGATTTCACATGGAAACTGCCCAAACCCACATCG
ACAGCCACGGTCAGAGGAAGAATTGAAGAAGGTGACGACAAGCATGTGTTGAAGTATGTG
GGTGGAGTTGATGTGAGCTTCTCAAAGGATGATCCGTCGGTTGCGTGTGGGACTATTGTC
GTTTTGGATCTCGGCACTTTGGAAGTTGTATACGATGACTACTCTGTTGTTAGGCTTCAA
ACCCCATATGTTCCTGGCTTCCTTGCCTTAAGAGAGGCTCCAGTTCTTTTAAAGCTTTTG
GAGAAAATGAAGAACAGTGCCCATCCTTTCTACCCACAGTTGCTAATGGTTGATGGCAAT
GGTTTACTTCATCCTCGAGGCAAGTGCACTTTTACCAGTTTTGGCTTGGCTTGTCATCTG
GGCGTTCTGGCTAATATTCCAACAATTGGGATAGGGAAAACTTTGCATCATGTGGATGGT
CTTACTCAATCTGGAGTGAGAGAACTTCTTGAAGCCAAAGGAAACTTGACTGAAGATTTT
ATTGCTTTAACAGGATACTCTGGCCGGACATTGGGAGTGGCAATGAGGTCAACTGAGAGC
TCATTGAAGCCGATATTTGTTTCAATTGGTCACCGTGTATCACTTGACACAGCCATCATA
ATTATTAAAATGACTTGCAATTATCGTGTGCCAGAGCCCGTTCGGCAGGCTGATATAAGA
TCAAGACAATACCTCCAGAAGCATCAATGGCGTTAAGATAATAAATG