Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g03010.t01
CDS Infomation

cds chromosome:12X:4:2495262:2500350:-1 gene:VIT_04s0008g03010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCATCCGAATCACAAACCCCCAACCTATCCGTAGAAGACGAAGCCAAGGCCCAGAGC
AAGAAAGCCGCCAAGAAAGAGGCCGCCAAACTTGAAAAGCAGCGCCGCCGCCAAGAAGCA
GCCTCCTCCGCCGCCTCTGCCTCTGTTGCTGGAATTTCCATAGGTGACACTCCCGACCCC
CTCGCTTCCAACTACGGCGATGTCCCTCTCCTTGATTTACAGTCCAAAGAGGTCACCGGT
CTCAAATGGACGGACATTGGGGCTTTGACCGAGGATCTCAAGGACCAGAAGGTGTTGATC
CGAGGGCGAGCACAGACCATTCGGGCCGTCGGCAAGAATATCGCCTTCTTGGTCGTCAGA
CAGATGGGTTTCACTGTTCAGTGCGTCTTGACGGTGGCTCCTGATCTAGTCAGTCGCCAC
ATGGTGAAATACGCCACGGGATTGAGCCGCGAGTCCCATGTTGACATTGAAGGGATCATT
TCTGTCCCCGGCGTTCCCATCAAGGGCGCTACACAACAGGTGGAAGTTCAAGTGAGGAAA
CTATATGGCATTAGCAAGGCTGAAAATCTACCAATTAATATTGAGGATGCTGCTCGAAGC
GAAAGCGAAATTGAGAAGGCTTTGCAGGCTGGAGAGCAGCTTGTTCGTGTTAATCAGGAT
ACCCGATTAAATTATAGGGTTCTTGACTTGAGAACCCCTGCTAATCAAGCAATTTTCCGC
GTCCAGTGTCAAGTTGAAAACATATTTAGGCAGTTCTTGTTATCTGAAGGTTTTGTTGGA
ATCCATACACCCAAATTGATAGGAGGCTCTAGTGAAGGTGGTTCAGCTGTTTTCAGACTG
GACTACAAAGGGCAACCTGCATGTCTGGCACAGTCACCTCAGCTTCACAAGCAAATGGCA
ATCTGTGGTGATTTTGGGCGTGTTTTCGAGATTGGTCCTGTTTTTAGAGCAGAGGACTCT
TTCACTCATAGACATCTGTGTGAGTTTACAGGTCTTGATGTTGAAATGGAGATCAAGGAA
CACTATTTTGAGGTGATGGATATTGTGGACCGGTTATTCGTTGCAATGTTTGACAGTTTG
AATGAGAATTGCAAGAAGGAGCTTGAAGCTATTGAGAGGCAGTATCCATTTGAACCTCTA
AAGTACTTGCGAAAAACTTTACGACTTCCATTTCAAGAAGGGGTTCAAATGCTCAAGGAA
GTTGGCATGGAAGTTGATCCTTATGGGGACCTGAACACAGAAGCAGAGAGAAAACTTGGC
CAGCTAGTTCTGGAGAAATATGGCACTGAATTTTACATACTTCACCGGTATCCTTTGGCT
GTTAGGCCATTTTATACCATGCCTTCCTACGATGATCCATTGTACAGTAATTCATTTGAT
GTCTTTATTCGAGGTGAGGAGATCATCTCAGGGGCTCAGCGTGTTCATGTACCTGATTTC
TTGGAAAAACGTGCAGAGGCTTGTGGCATTGATGTTAAGACTATATCAACATATATTGAT
TCCTTCCGGTATGGTGCACCTCCACATGGTGGGTTTGGAGTGGGTTTGGAGCGAGTGGTG
ATGCTCTTCTGTGCTCTTAATAATATTCGCAAAACTTCACTTTTCCCCCGCGATCCAACC
AGAATTGCCCCATGA

Peptide Sequence

PEP ID

VIT_04s0008g03010.t01
PEP Infomation

pep chromosome:12X:4:2495262:2500350:-1 gene:VIT_04s0008g03010 transcript:VIT_04s0008g03010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSESQTPNLSVEDEAKAQSKKAAKKEAAKLEKQRRRQEAASSAASASVAGISIGDTPDP
LASNYGDVPLLDLQSKEVTGLKWTDIGALTEDLKDQKVLIRGRAQTIRAVGKNIAFLVVR
QMGFTVQCVLTVAPDLVSRHMVKYATGLSRESHVDIEGIISVPGVPIKGATQQVEVQVRK
LYGISKAENLPINIEDAARSESEIEKALQAGEQLVRVNQDTRLNYRVLDLRTPANQAIFR
VQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGGSAVFRLDYKGQPACLAQSPQLHKQMA
ICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKEHYFEVMDIVDRLFVAMFDSL
NENCKKELEAIERQYPFEPLKYLRKTLRLPFQEGVQMLKEVGMEVDPYGDLNTEAERKLG
QLVLEKYGTEFYILHRYPLAVRPFYTMPSYDDPLYSNSFDVFIRGEEIISGAQRVHVPDF
LEKRAEACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRDPT
RIAP

Transcript Sequence

Transcript ID

VIT_04s0008g03010.t01
Transcript Infomation

cdna chromosome:12X:4:2495262:2500350:-1 gene:VIT_04s0008g03010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTCTCCATATCCAAAGTTCCAAACCCTAGACTTTTCTATACGTGAGACAGCAGTAGCGG
CGGCTGTTGCTCATTTCCTCGTCTTTCTTCATCTGCTTCATTATCTTCTTCGATCCCGAT
AAACATAGTGAAAATTTTGAGTTAAACACAAATGTCATCCGAATCACAAACCCCCAACCT
ATCCGTAGAAGACGAAGCCAAGGCCCAGAGCAAGAAAGCCGCCAAGAAAGAGGCCGCCAA
ACTTGAAAAGCAGCGCCGCCGCCAAGAAGCAGCCTCCTCCGCCGCCTCTGCCTCTGTTGC
TGGAATTTCCATAGGTGACACTCCCGACCCCCTCGCTTCCAACTACGGCGATGTCCCTCT
CCTTGATTTACAGTCCAAAGAGGTCACCGGTCTCAAATGGACGGACATTGGGGCTTTGAC
CGAGGATCTCAAGGACCAGAAGGTGTTGATCCGAGGGCGAGCACAGACCATTCGGGCCGT
CGGCAAGAATATCGCCTTCTTGGTCGTCAGACAGATGGGTTTCACTGTTCAGTGCGTCTT
GACGGTGGCTCCTGATCTAGTCAGTCGCCACATGGTGAAATACGCCACGGGATTGAGCCG
CGAGTCCCATGTTGACATTGAAGGGATCATTTCTGTCCCCGGCGTTCCCATCAAGGGCGC
TACACAACAGGTGGAAGTTCAAGTGAGGAAACTATATGGCATTAGCAAGGCTGAAAATCT
ACCAATTAATATTGAGGATGCTGCTCGAAGCGAAAGCGAAATTGAGAAGGCTTTGCAGGC
TGGAGAGCAGCTTGTTCGTGTTAATCAGGATACCCGATTAAATTATAGGGTTCTTGACTT
GAGAACCCCTGCTAATCAAGCAATTTTCCGCGTCCAGTGTCAAGTTGAAAACATATTTAG
GCAGTTCTTGTTATCTGAAGGTTTTGTTGGAATCCATACACCCAAATTGATAGGAGGCTC
TAGTGAAGGTGGTTCAGCTGTTTTCAGACTGGACTACAAAGGGCAACCTGCATGTCTGGC
ACAGTCACCTCAGCTTCACAAGCAAATGGCAATCTGTGGTGATTTTGGGCGTGTTTTCGA
GATTGGTCCTGTTTTTAGAGCAGAGGACTCTTTCACTCATAGACATCTGTGTGAGTTTAC
AGGTCTTGATGTTGAAATGGAGATCAAGGAACACTATTTTGAGGTGATGGATATTGTGGA
CCGGTTATTCGTTGCAATGTTTGACAGTTTGAATGAGAATTGCAAGAAGGAGCTTGAAGC
TATTGAGAGGCAGTATCCATTTGAACCTCTAAAGTACTTGCGAAAAACTTTACGACTTCC
ATTTCAAGAAGGGGTTCAAATGCTCAAGGAAGTTGGCATGGAAGTTGATCCTTATGGGGA
CCTGAACACAGAAGCAGAGAGAAAACTTGGCCAGCTAGTTCTGGAGAAATATGGCACTGA
ATTTTACATACTTCACCGGTATCCTTTGGCTGTTAGGCCATTTTATACCATGCCTTCCTA
CGATGATCCATTGTACAGTAATTCATTTGATGTCTTTATTCGAGGTGAGGAGATCATCTC
AGGGGCTCAGCGTGTTCATGTACCTGATTTCTTGGAAAAACGTGCAGAGGCTTGTGGCAT
TGATGTTAAGACTATATCAACATATATTGATTCCTTCCGGTATGGTGCACCTCCACATGG
TGGGTTTGGAGTGGGTTTGGAGCGAGTGGTGATGCTCTTCTGTGCTCTTAATAATATTCG
CAAAACTTCACTTTTCCCCCGCGATCCAACCAGAATTGCCCCATGATCAAGATATTGACT
TGTTAGTGAGTCTCTTCCAGGCAGGCAGATGTGAAAACATATCAATTATTACTATACTGC
TTTTAGAAAACTACTGGTTGTACATTTGATACTTGTTTTTGTCACAATTTTGGGTCACTC
TATTTTTGAGATAACCTACTATGCAATGCCTCTCCATTCCTGGAATAAA