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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g02850.t01
CDS Infomation

cds chromosome:12X:4:2365579:2368890:-1 gene:VIT_04s0008g02850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7SU52]
Sequence

ATGGGAACGACTATCATTGGAGTCACCTACAATGGTGGTGTCGTCCTCGGCGCCGACTCC
AGAACCAGCACTGGAATGTATGTCGCTAACAGAGCATCGGACAAAATCACACAGCTGACA
GATAATGTCTACATTTGTCGCTCTGGATCGGCTGCAGATTCTCAGATTGTCTCTGATTAT
GTGCGTTACTTTCTTCATCAACACACGATACAGCTTGGGCAGCCTGCGACTGTCAAAGTT
GCTGCAAACCTTGTCAGGCTTGTATCATATAATAACAAGAACATGCTAGAGACTGGCTTA
ATAGTTGGTGGATGGGATAAGTATGAAGGTGGTAAAATATATGCAATCCCTCTTGGAGGA
ACAATTATAGAGCAGCCTTTTGCTATTGGAGGTTCTGGCTCCACTTACTTGTATGGATTT
TTTGACCAAGCATGGAAAGAGGGAATGACTAAGGATGAAGCTGAGCAATTAGTGGTTAAG
GCTGTCTCTCTTGCCATTGCTCGTGATGGAGCTAGCGGTGGTGTCATCCGCACTGTCATT
ATAAACTCTGAAGGAGTGACAAGAAACTTCTACCCAGGTGATTCTCTTCCACTGTGGCAC
GAGGAGTTGCCACCTCAGAATTCATTGCTGGAACTACTGCACTCTTCTAGTCCTGAGCCA
ATGAACGTGTAA

Peptide Sequence

PEP ID

VIT_04s0008g02850.t01
PEP Infomation

pep chromosome:12X:4:2365579:2368890:-1 gene:VIT_04s0008g02850 transcript:VIT_04s0008g02850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7SU52]
Sequence

MGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADSQIVSDY
VRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEGGKIYAIPLGG
TIIEQPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGASGGVIRTVI
INSEGVTRNFYPGDSLPLWHEELPPQNSLLELLHSSSPEPMNV

Transcript Sequence

Transcript ID

VIT_04s0008g02850.t01
Transcript Infomation

cdna chromosome:12X:4:2365579:2368890:-1 gene:VIT_04s0008g02850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:D7SU52]
Sequence

CTGAGTTAGGGTTGTGAGAACTGAGAAGTGAGTGAATTTTGAAAGTTGGGTGAAGTTGAA
AGCAAGAAGGGTAGTAATGGACCTGAATGCACCGCACACCATGGGAACGACTATCATTGG
AGTCACCTACAATGGTGGTGTCGTCCTCGGCGCCGACTCCAGAACCAGCACTGGAATGTA
TGTCGCTAACAGAGCATCGGACAAAATCACACAGCTGACAGATAATGTCTACATTTGTCG
CTCTGGATCGGCTGCAGATTCTCAGATTGTCTCTGATTATGTGCGTTACTTTCTTCATCA
ACACACGATACAGCTTGGGCAGCCTGCGACTGTCAAAGTTGCTGCAAACCTTGTCAGGCT
TGTATCATATAATAACAAGAACATGCTAGAGACTGGCTTAATAGTTGGTGGATGGGATAA
GTATGAAGGTGGTAAAATATATGCAATCCCTCTTGGAGGAACAATTATAGAGCAGCCTTT
TGCTATTGGAGGTTCTGGCTCCACTTACTTGTATGGATTTTTTGACCAAGCATGGAAAGA
GGGAATGACTAAGGATGAAGCTGAGCAATTAGTGGTTAAGGCTGTCTCTCTTGCCATTGC
TCGTGATGGAGCTAGCGGTGGTGTCATCCGCACTGTCATTATAAACTCTGAAGGAGTGAC
AAGAAACTTCTACCCAGGTGATTCTCTTCCACTGTGGCACGAGGAGTTGCCACCTCAGAA
TTCATTGCTGGAACTACTGCACTCTTCTAGTCCTGAGCCAATGAACGTGTAATATCAGAC
CAACTACATACCAATTACTGTCCGCTCACCACTTGATCATTTTAATTTTACCAATTGGGA
CAGTAATTGTATATGCACTAGCTCTGCTTTATATCCATAAATATCAAATTTGCAGTTGAA
TGTTT