Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g02250.t01
CDS Infomation

cds chromosome:12X:4:1854711:1857108:1 gene:VIT_04s0008g02250 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6H2U5]
Sequence

ATGGCTGGTGAGCAGCATCTCTTAGCTACCGAGATTGTGAACCGTGGAATCGAATCCTCC
GGCCCTAATGCTGGATCCCAGACCTTTTCAGTGAGGGTCCGACGGAGGCTGCCGGACTTT
GTCCAATCTGTGAATCTTAAGTATGTGAAATTGGGGTATCATTATCTCATCAACCATGCC
ATCTACTTGGCCACCATCCCTGTCCTGGTGCTTGTCTTCAGCGCTGAGGTTGGGAGTCTC
AACAAGGAGGAGCTCTGGAAGAAGCTCTGGGAGGACGCCCGCTACGACCTCGCCACTGTC
CTCGGTTTCTTCGGCGTCTTCGTCTTCACCCTCTCCGTTTACATCATGTCCCGCCCCCGC
TCCATCTACCTCATTGACTTCGCATGCTTCAAACCCCACGACGATCTCAAGTTGTCGAAG
CAGCAGCTGATCGAAGCGGTTAGAAGATCTGGAAAGCACGACGAGGCGAGCATAGAGTTT
CAGAAGAGAATTCTAATGTCATCAGGCATAGGAGACGAGACGTACATCCCAAAGGCGGTG
ATGGCCGGAGAGAACTGCGCGACGATGAAAGAAGGACGAGCAGAGGCCGGGATGGTGATG
TTCGGGGCGCTGGACGAGCTCTTCGAGAAAACCAGAGTCCGGCCGAAGGACGTGGGGGTG
CTGGTGGTGAACTGCAGCATATTCAATCCAACTCCATCACTCTCTGCGATGATCATCAAC
CACTACAAGATGCGAGGCAACATCCTGAGCTTCAATTTGGGCGGAATGGGGTGTAGTGCG
GGAGTGATAGCCTTAGATCTGGCTCGCGACATGCTCGAATCGAATCCAAACAACTACGCC
GTAGTGGTGAGCACAGAGATGGTGGGATACAATTGGTATCCGGGAAAAGAGCGGTCCATG
ATCATACCCAACTGTTTCTTCCGCATGGGCTGCTCTGCTCTGCTTCTCTCCAACCGCCGG
AGTGACTACCGGCATGCAAAGTACCGGCTCGAACACATTGTTCGCACGCATAAAGGTGCT
GATGACAGAAGCTTCAGGTGTGTTTACCAGGAAGAAGACTCAGAGAGGTTCAAGGGGCTG
AGAGTGAGCAAAGACTTGATCGAGATAGGCGGGGACGCGCTCAAAACCAATATCACCACC
TTGGGGCCTCTGGTGCTTCCCTTCTCTGAGCAGCTTCTCTTCTTCGCCACCCTGGTCTGG
AGGAACCTCTTCGGCCACGGGGGCCCTCAGCAGCCGCCGACAAAGCCATACATCCCCGAC
TACAAGCTCGCATTCGAGCACTTCTGCGTCCACGCCGCCAGCAAGACCGTGCTGGACGAG
CTGCAGAGGAACTTGGGATTGAGCGACAGCAACGTGGAGGCTTCGCGCATGACCCTGCAC
CGCTTCGGCAACACTTCGAGCAGCAGCATTTGGTACGAGTTGGCGTATTTGGAAGCTAAG
GAGAGGGTGAAAAGGGGAGACCGAGTCTGGCAAATTTCATTTGGGTCTGGGTTCAAGTGC
AATAGCCTTGTGTGGAGGGCTATGCGCCGGGTGAAGAAGCCCTCAAGCAATCCTTGGCTT
GACTGCCTTGACAGATACCCGGTGTACCATTAA

Peptide Sequence

PEP ID

VIT_04s0008g02250.t01
PEP Infomation

pep chromosome:12X:4:1854711:1857108:1 gene:VIT_04s0008g02250 transcript:VIT_04s0008g02250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6H2U5]
Sequence

MAGEQHLLATEIVNRGIESSGPNAGSQTFSVRVRRRLPDFVQSVNLKYVKLGYHYLINHA
IYLATIPVLVLVFSAEVGSLNKEELWKKLWEDARYDLATVLGFFGVFVFTLSVYIMSRPR
SIYLIDFACFKPHDDLKLSKQQLIEAVRRSGKHDEASIEFQKRILMSSGIGDETYIPKAV
MAGENCATMKEGRAEAGMVMFGALDELFEKTRVRPKDVGVLVVNCSIFNPTPSLSAMIIN
HYKMRGNILSFNLGGMGCSAGVIALDLARDMLESNPNNYAVVVSTEMVGYNWYPGKERSM
IIPNCFFRMGCSALLLSNRRSDYRHAKYRLEHIVRTHKGADDRSFRCVYQEEDSERFKGL
RVSKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRNLFGHGGPQQPPTKPYIPD
YKLAFEHFCVHAASKTVLDELQRNLGLSDSNVEASRMTLHRFGNTSSSSIWYELAYLEAK
ERVKRGDRVWQISFGSGFKCNSLVWRAMRRVKKPSSNPWLDCLDRYPVYH

Transcript Sequence

Transcript ID

VIT_04s0008g02250.t01
Transcript Infomation

cdna chromosome:12X:4:1854711:1857108:1 gene:VIT_04s0008g02250 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6H2U5]
Sequence

ATATGGCTGGTGAGCAGCATCTCTTAGCTACCGAGATTGTGAACCGTGGAATCGAATCCT
CCGGCCCTAATGCTGGATCCCAGACCTTTTCAGTGAGGGTCCGACGGAGGCTGCCGGACT
TTGTCCAATCTGTGAATCTTAAGTATGTGAAATTGGGGTATCATTATCTCATCAACCATG
CCATCTACTTGGCCACCATCCCTGTCCTGGTGCTTGTCTTCAGCGCTGAGGTTGGGAGTC
TCAACAAGGAGGAGCTCTGGAAGAAGCTCTGGGAGGACGCCCGCTACGACCTCGCCACTG
TCCTCGGTTTCTTCGGCGTCTTCGTCTTCACCCTCTCCGTTTACATCATGTCCCGCCCCC
GCTCCATCTACCTCATTGACTTCGCATGCTTCAAACCCCACGACGATCTCAAGTTGTCGA
AGCAGCAGCTGATCGAAGCGGTTAGAAGATCTGGAAAGCACGACGAGGCGAGCATAGAGT
TTCAGAAGAGAATTCTAATGTCATCAGGCATAGGAGACGAGACGTACATCCCAAAGGCGG
TGATGGCCGGAGAGAACTGCGCGACGATGAAAGAAGGACGAGCAGAGGCCGGGATGGTGA
TGTTCGGGGCGCTGGACGAGCTCTTCGAGAAAACCAGAGTCCGGCCGAAGGACGTGGGGG
TGCTGGTGGTGAACTGCAGCATATTCAATCCAACTCCATCACTCTCTGCGATGATCATCA
ACCACTACAAGATGCGAGGCAACATCCTGAGCTTCAATTTGGGCGGAATGGGGTGTAGTG
CGGGAGTGATAGCCTTAGATCTGGCTCGCGACATGCTCGAATCGAATCCAAACAACTACG
CCGTAGTGGTGAGCACAGAGATGGTGGGATACAATTGGTATCCGGGAAAAGAGCGGTCCA
TGATCATACCCAACTGTTTCTTCCGCATGGGCTGCTCTGCTCTGCTTCTCTCCAACCGCC
GGAGTGACTACCGGCATGCAAAGTACCGGCTCGAACACATTGTTCGCACGCATAAAGGTG
CTGATGACAGAAGCTTCAGGTGTGTTTACCAGGAAGAAGACTCAGAGAGGTTCAAGGGGC
TGAGAGTGAGCAAAGACTTGATCGAGATAGGCGGGGACGCGCTCAAAACCAATATCACCA
CCTTGGGGCCTCTGGTGCTTCCCTTCTCTGAGCAGCTTCTCTTCTTCGCCACCCTGGTCT
GGAGGAACCTCTTCGGCCACGGGGGCCCTCAGCAGCCGCCGACAAAGCCATACATCCCCG
ACTACAAGCTCGCATTCGAGCACTTCTGCGTCCACGCCGCCAGCAAGACCGTGCTGGACG
AGCTGCAGAGGAACTTGGGATTGAGCGACAGCAACGTGGAGGCTTCGCGCATGACCCTGC
ACCGCTTCGGCAACACTTCGAGCAGCAGCATTTGGTACGAGTTGGCGTATTTGGAAGCTA
AGGAGAGGGTGAAAAGGGGAGACCGAGTCTGGCAAATTTCATTTGGGTCTGGGTTCAAGT
GCAATAGCCTTGTGTGGAGGGCTATGCGCCGGGTGAAGAAGCCCTCAAGCAATCCTTGGC
TTGACTGCCTTGACAGATACCCGGTGTACCATTAAACCCTGCTAGTGTTTAAGTTGGATT
AGCTTAAAAATAGTATTTATGCGTTGGGTTTTATTGAAAAGGATTTGATATTATGGAAAC
AATATTTGAAAGGAGTGAAATGTTAAAATCTATGATCATGTCATAGAAGTGAAGTGGTTT
TTACAAGCTTAGAATAATTTTATGAGATGATTATTTATGGGTGA