Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_04s0008g02200.t01
CDS Infomation	cds chromosome:12X:4:1804303:1816845:-1 gene:VIT_04s0008g02200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:F6H2U3]
Sequence	ATGCTCATTCGCTCTGGGAGATTTTCAGTTCGAATTGCAGACTTGGGACCCTCTATCAAG TTGGAACCGAGCGAGGAGAAGGGACTACTTGGTGAAGCTCTGCAGTCTGGTCGTGCTGAA TATGTATCTGCCGACCTTCGAGACAAGGCTCAAGTGCTTAAAGCATGCCAAGGAGCTGAG GCTGTTTTCCACATGGCTGCTCCAGATTCATCCATTAACAATCACCAGCTCCATCATTCA GTCAATGTGCAAGGAACAAAGAATGTAATTGATGCCTGTATTGAGCAAAAAGTAAAGAGA CTTATCTATACAAGCTCTCCTAGTGTGGTTTTTGATGGGGTTCACGGAATATTTAATGGG GACGAGTCACTGCCGTATCCAGATAAGCACAATGATTCATATTCGGCAACTAAAGCTGAA GGAGAGGCATTGGTGATCAAGTCAAATGGTACTAATGGACTTCTGACATGCTGCATACGT CCAAGCAGCATCTTTGGCCCTGGCGATAAGTTGTTGGTTCCGTCTTTGGTTAATGCTGCA AGGGCTGGGAAATCCAAGTTCATCATTGGTGATGGCAATAACATGTATGATTTCACTTAT GTTGAAAATGTGGCACATGCCCATATATGTGCTGAACAAGCTCTGGCTTCAGAAGGGAAG ATTGCAGAGCAAGCTGCAGGGCAGGCATACTTTATAACCAATATGGAACCAATCAAGTTT TGGGAGTTTGTCTCACTTATTCTTGAAGGTCTTGGCTATGAAAGGCCAAGAATAAAGATC CCTGCCTTGGTTATGATGCCTATCGCACACATGGTGGAGTGGACCTATAAGATGTTAGCC CCATATGGTATGAAGGTTCCTCAGTTGACCCCTTCAAGAATTAGGCTCCTCTCTTGCAGC AGAACTTTTAGTTGTTCAAAAGCGAAGGATCAACTTAGCTACACGCCCATTGTATCACTC CAGGAGGGTCTAAGGAGGACAATTGATTCATACCCAGATTTGAGAGCTGAACATCTTCCT AAAAGAGAGGGACCATCTAAAGCTTCCAGATATCTTGGAAGTGGAAGAGTGGCTGACACA CTTCTGTGGAAGGATAAAAAGCTGGCACTCACCACATTGTTAGTTTTGATGGCGTTTTAC CACAACTTCATTGCATCTGGCTATACCATCGTCACTGCAGTTTCAAAACTTTTCTTGGTG GCATCAATATTCTTGTTCATCCATGGCAATTTACCTGAGAAAATATTGGGGTATACGGTT GAGAAAATTCCTCCATCAAATTTCCATTTCTCAGAAGAGAGGTCACATCGAGCTGCTCTC TCAGTAGCTTCATCATGGAATACTGCTGTAAATGTTTTAAAATCTCTTTGCAAGGGGGAT GACTGGATGCTGTTCCTTAAGGTTGTTCTCTCCCTATTGATTCTCAGCTTCCTTGGAGCT ATTTCACTGCAAAGCTTATTTGTTACAGGGCTTCTAATTGCCTTTGTAGCTTTCTACATC TATGAGAACAAGGAAGAAGAAATCGACAGACTGGCTTCAGAAGCTCTCTCCTTCAGCTGC AAATTGAAATCTGATATAGCCAAAAAATTACCTACCTTCAAGAAATTCAGTCCTAGTCGG TTGTCTGATGTTAAATCATTAGACAAATTGGATTTAGAGAGCTGGATGGAATGGAAAAGT AGCTTGCAGCTCATACTTGCTCTGATGGACTTGGAGCTTGCTCTCTATGAAGCCAAACCC CCCATGCCTACCGTGAATAGCTCCCCTGAAGATAGAGCAAAGTATGAAAAATGGGAGAGG AGTAACCGGCTAAGCCTCATGATCATGAAGCACAAAATTTCTAGTAGCATTCGCAGTCTA GTACCCGGGTCGGGCACTGCTAGACAATACTTGGCTCGTCTTGAAGTCATGTTCATACGC ATTGCGAAGGCCGATGCAGCTCCGTTACTAAACAAGTTAGCAAACATGAAATATGATGGC CAAGGGAATGTGCGTGATCACATTGCCAACATGTCGGGTTTGGCTGCGAGGGTTAAGGCT GGAGGTATCGATATTCCTGAATGTTTCGTTGTGCAACTTGTCCTGGATTCTCTTCCTCCT CAATATGAACGGTTCCAAGCTTCATATAAAGTGAATTGGGGACTAGAGGAACTTTTGTGT ATGTGTGGGCAAGAGGAGGAATTCGTTCGGCTTGAAAATTCTGAAAGGAAGATCTCTGCT ATTCCGGGTCTTGGTCCAAATAATGAAAAGAAGTATAGCTTTCTTTTCACTCGATGA

Peptide Sequence

PEP ID	VIT_04s0008g02200.t01
PEP Infomation	pep chromosome:12X:4:1804303:1816845:-1 gene:VIT_04s0008g02200 transcript:VIT_04s0008g02200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:F6H2U3]
Sequence	MLIRSGRFSVRIADLGPSIKLEPSEEKGLLGEALQSGRAEYVSADLRDKAQVLKACQGAE AVFHMAAPDSSINNHQLHHSVNVQGTKNVIDACIEQKVKRLIYTSSPSVVFDGVHGIFNG DESLPYPDKHNDSYSATKAEGEALVIKSNGTNGLLTCCIRPSSIFGPGDKLLVPSLVNAA RAGKSKFIIGDGNNMYDFTYVENVAHAHICAEQALASEGKIAEQAAGQAYFITNMEPIKF WEFVSLILEGLGYERPRIKIPALVMMPIAHMVEWTYKMLAPYGMKVPQLTPSRIRLLSCS RTFSCSKAKDQLSYTPIVSLQEGLRRTIDSYPDLRAEHLPKREGPSKASRYLGSGRVADT LLWKDKKLALTTLLVLMAFYHNFIASGYTIVTAVSKLFLVASIFLFIHGNLPEKILGYTV EKIPPSNFHFSEERSHRAALSVASSWNTAVNVLKSLCKGDDWMLFLKVVLSLLILSFLGA ISLQSLFVTGLLIAFVAFYIYENKEEEIDRLASEALSFSCKLKSDIAKKLPTFKKFSPSR LSDVKSLDKLDLESWMEWKSSLQLILALMDLELALYEAKPPMPTVNSSPEDRAKYEKWER SNRLSLMIMKHKISSSIRSLVPGSGTARQYLARLEVMFIRIAKADAAPLLNKLANMKYDG QGNVRDHIANMSGLAARVKAGGIDIPECFVVQLVLDSLPPQYERFQASYKVNWGLEELLC MCGQEEEFVRLENSERKISAIPGLGPNNEKKYSFLFTR

Transcript Sequence

Transcript ID	VIT_04s0008g02200.t01
Transcript Infomation	cdna chromosome:12X:4:1804303:1816845:-1 gene:VIT_04s0008g02200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:F6H2U3]
Sequence	AAGAAAGAAGACTAGAGGCAGAGAAAGAGGAGCATCCAAATGAAAATCTCCCCATCAACG GCGGTTAATTAACCTGCCCATTCGTTTATCTGTGGGTCTCTCAGATCCTCGGAGCTGTGA AATCCCTTATTAGGATTTGATTCAACAGAGAGACAGAGTTGAACAACAGAGGACTCGGGG CCTTGTGGAGTATGGAGGGGGAGCAGAAATGGTGTGTTGTGACTGGGGGGAGGGGTTTTG CTGCACGGCATTTGGTGGAAATGCTCATTCGCTCTGGGAGATTTTCAGTTCGAATTGCAG ACTTGGGACCCTCTATCAAGTTGGAACCGAGCGAGGAGAAGGGACTACTTGGTGAAGCTC TGCAGTCTGGTCGTGCTGAATATGTATCTGCCGACCTTCGAGACAAGGCTCAAGTGCTTA AAGCATGCCAAGGAGCTGAGGCTGTTTTCCACATGGCTGCTCCAGATTCATCCATTAACA ATCACCAGCTCCATCATTCAGTCAATGTGCAAGGAACAAAGAATGTAATTGATGCCTGTA TTGAGCAAAAAGTAAAGAGACTTATCTATACAAGCTCTCCTAGTGTGGTTTTTGATGGGG TTCACGGAATATTTAATGGGGACGAGTCACTGCCGTATCCAGATAAGCACAATGATTCAT ATTCGGCAACTAAAGCTGAAGGAGAGGCATTGGTGATCAAGTCAAATGGTACTAATGGAC TTCTGACATGCTGCATACGTCCAAGCAGCATCTTTGGCCCTGGCGATAAGTTGTTGGTTC CGTCTTTGGTTAATGCTGCAAGGGCTGGGAAATCCAAGTTCATCATTGGTGATGGCAATA ACATGTATGATTTCACTTATGTTGAAAATGTGGCACATGCCCATATATGTGCTGAACAAG CTCTGGCTTCAGAAGGGAAGATTGCAGAGCAAGCTGCAGGGCAGGCATACTTTATAACCA ATATGGAACCAATCAAGTTTTGGGAGTTTGTCTCACTTATTCTTGAAGGTCTTGGCTATG AAAGGCCAAGAATAAAGATCCCTGCCTTGGTTATGATGCCTATCGCACACATGGTGGAGT GGACCTATAAGATGTTAGCCCCATATGGTATGAAGGTTCCTCAGTTGACCCCTTCAAGAA TTAGGCTCCTCTCTTGCAGCAGAACTTTTAGTTGTTCAAAAGCGAAGGATCAACTTAGCT ACACGCCCATTGTATCACTCCAGGAGGGTCTAAGGAGGACAATTGATTCATACCCAGATT TGAGAGCTGAACATCTTCCTAAAAGAGAGGGACCATCTAAAGCTTCCAGATATCTTGGAA GTGGAAGAGTGGCTGACACACTTCTGTGGAAGGATAAAAAGCTGGCACTCACCACATTGT TAGTTTTGATGGCGTTTTACCACAACTTCATTGCATCTGGCTATACCATCGTCACTGCAG TTTCAAAACTTTTCTTGGTGGCATCAATATTCTTGTTCATCCATGGCAATTTACCTGAGA AAATATTGGGGTATACGGTTGAGAAAATTCCTCCATCAAATTTCCATTTCTCAGAAGAGA GGTCACATCGAGCTGCTCTCTCAGTAGCTTCATCATGGAATACTGCTGTAAATGTTTTAA AATCTCTTTGCAAGGGGGATGACTGGATGCTGTTCCTTAAGGTTGTTCTCTCCCTATTGA TTCTCAGCTTCCTTGGAGCTATTTCACTGCAAAGCTTATTTGTTACAGGGCTTCTAATTG CCTTTGTAGCTTTCTACATCTATGAGAACAAGGAAGAAGAAATCGACAGACTGGCTTCAG AAGCTCTCTCCTTCAGCTGCAAATTGAAATCTGATATAGCCAAAAAATTACCTACCTTCA AGAAATTCAGTCCTAGTCGGTTGTCTGATGTTAAATCATTAGACAAATTGGATTTAGAGA GCTGGATGGAATGGAAAAGTAGCTTGCAGCTCATACTTGCTCTGATGGACTTGGAGCTTG CTCTCTATGAAGCCAAACCCCCCATGCCTACCGTGAATAGCTCCCCTGAAGATAGAGCAA AGTATGAAAAATGGGAGAGGAGTAACCGGCTAAGCCTCATGATCATGAAGCACAAAATTT CTAGTAGCATTCGCAGTCTAGTACCCGGGTCGGGCACTGCTAGACAATACTTGGCTCGTC TTGAAGTCATGTTCATACGCATTGCGAAGGCCGATGCAGCTCCGTTACTAAACAAGTTAG CAAACATGAAATATGATGGCCAAGGGAATGTGCGTGATCACATTGCCAACATGTCGGGTT TGGCTGCGAGGGTTAAGGCTGGAGGTATCGATATTCCTGAATGTTTCGTTGTGCAACTTG TCCTGGATTCTCTTCCTCCTCAATATGAACGGTTCCAAGCTTCATATAAAGTGAATTGGG GACTAGAGGAACTTTTGTGTATGTGTGGGCAAGAGGAGGAATTCGTTCGGCTTGAAAATT CTGAAAGGAAGATCTCTGCTATTCCGGGTCTTGGTCCAAATAATGAAAAGAAGTATAGCT TTCTTTTCACTCGATGATCACCTGCTTGAAAAGAAGGACTAGTGTCCGGGGAACAAGGTG GTGGACATAAGGTTATCATGAGAGCTATGGAAGGCAAGTTTTTTTGTTAAGGGTTTACTA GATTCTATAATGATACTTGATACACTTTGAATTAGAATATATGGGGGTT