Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g01200.t01
CDS Infomation

cds chromosome:12X:4:982099:986826:-1 gene:VIT_04s0008g01200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation machinery-associated protein 22 [Source:UniProtKB/TrEMBL;Acc:D7STQ8]
Sequence

ATGGCAGAAAAACCCCAACCGGTACGGGTTCTGTACTGCTCCGTTTGTAGTCTTCCAGCA
GAGTATTGCGAATTCGGACCCGATTTTGAGAAATGCAAGCCATGGTTGATCAAGAACGCG
CCCGAACTCTACCCAGATCTTCTTAAAGAGGCTAGTGAAAAGGAAGCTGACAAGGTTTCT
GAACAGCTACAGTCAGTTGGGATCTCTTCCGGGGCTGGCAATGAGACTGCTCCTTCTGGG
AAAACGTCAACATCTAAGCAAGAGGAAGTAAAACGTCTTCCTGGTGGAAAAATAAAGAAG
AAAGAGAAACAAGAGGTCATTATTGAGAAGGTTGTGCGCAATAAGCGCAAGTGTATCACA
ATTGTGAAAGGACTGGACCTATTTGGTGTTAAACTTGGTGATGCTTCCAAAAAGCTTGGG
AAGAAGTTTGCCACCGGAGCATCTGTTGTTAAGGGCCCAACTGATAAGGAGCAAATTGAT
GTTCAAGGGGACATATCCTACGACATTGTAGAATTTGTAACAGATACCTGGCCTGATGTG
CCTGAAACTGCCATTTACTTCATTGAAGACGGGAGAAAGGTCTCGGCTGCTTGA

Peptide Sequence

PEP ID

VIT_04s0008g01200.t01
PEP Infomation

pep chromosome:12X:4:982099:986826:-1 gene:VIT_04s0008g01200 transcript:VIT_04s0008g01200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation machinery-associated protein 22 [Source:UniProtKB/TrEMBL;Acc:D7STQ8]
Sequence

MAEKPQPVRVLYCSVCSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEASEKEADKVS
EQLQSVGISSGAGNETAPSGKTSTSKQEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKCIT
IVKGLDLFGVKLGDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEFVTDTWPDV
PETAIYFIEDGRKVSAA

Transcript Sequence

Transcript ID

VIT_04s0008g01200.t01
Transcript Infomation

cdna chromosome:12X:4:982099:986826:-1 gene:VIT_04s0008g01200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation machinery-associated protein 22 [Source:UniProtKB/TrEMBL;Acc:D7STQ8]
Sequence

GAGAAACAAAATTCCTGAAAGCAAAATTCTCCAAGTGCCCGATAATTGGTTCGGACTTCG
GTGAAGCCATACCTAGATCAAATCTAGAGAGAGCAGGAGGAGAGAAGAGAGAGGAGAGAG
TAGAGAGAAGGCTTCAATGGCAGAAAAACCCCAACCGGTACGGGTTCTGTACTGCTCCGT
TTGTAGTCTTCCAGCAGAGTATTGCGAATTCGGACCCGATTTTGAGAAATGCAAGCCATG
GTTGATCAAGAACGCGCCCGAACTCTACCCAGATCTTCTTAAAGAGGCTAGTGAAAAGGA
AGCTGACAAGGTTTCTGAACAGCTACAGTCAGTTGGGATCTCTTCCGGGGCTGGCAATGA
GACTGCTCCTTCTGGGAAAACGTCAACATCTAAGCAAGAGGAAGTAAAACGTCTTCCTGG
TGGAAAAATAAAGAAGAAAGAGAAACAAGAGGTCATTATTGAGAAGGTTGTGCGCAATAA
GCGCAAGTGTATCACAATTGTGAAAGGACTGGACCTATTTGGTGTTAAACTTGGTGATGC
TTCCAAAAAGCTTGGGAAGAAGTTTGCCACCGGAGCATCTGTTGTTAAGGGCCCAACTGA
TAAGGAGCAAATTGATGTTCAAGGGGACATATCCTACGACATTGTAGAATTTGTAACAGA
TACCTGGCCTGATGTGCCTGAAACTGCCATTTACTTCATTGAAGACGGGAGAAAGGTCTC
GGCTGCTTGAATTCAGAGTCGAAAGGGAACTGGTGCTGATATTCATATCTACAACAATGC
TCCAAAACTGATAAAAGCTATCACCAGAAAGAAGAAAACATGCCATCCAGCACCAGCGTC
GGAATCTTATTACACAAATATGACATCCCTTATCAATTATGTAATCCTTGAGTTGGTTTT
CCAGCACCCTTTGTGATAGTTTATATCTGCTGAAAGGTCAGCAGTACTACCAGGACTGAC
TCCCATTATTCCCAGGGTGAAACATATGTATTTTTGCAGTTGAAAA