Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_04s0008g00800.t01
CDS Infomation

cds chromosome:12X:4:690539:694710:1 gene:VIT_04s0008g00800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferrochelatase [Source:UniProtKB/TrEMBL;Acc:D7STM2]
Sequence

ATGGAGGCAGTTTCAACCTCCAGTATTCTCCCCCATGGGAAAGTCTCCGGTTTGAATCAT
CGGAGCTTTAATCAGAAATCGTCTATGTCATGCCCTCAGACCAGATCGTTTAAGTCTGCA
CACTGTTATTCATCTGAGGGTCTCAAGGGATCACAGCTTTTGAACTCCATTGAGAAGAGA
AATCCAGTTGGGCAAACATTTTCATCTGCAGGAGCATACACTTATGTTGGAAGTGCTGTG
GAATCCCCTACACATGCTGTGGAAGAAAAGGTTGGAGTGCTGCTTTTGAATCTTGGAGGA
CCAGAGACACTTCATGATGTTCAACCATTTTTGTTCAATTTATTTGCTGATCCAGATATT
ATTCGACTTCCAAGGCTGTTCCAGTTTCTCCAGCGACCATTGGCTCAACTAATTTCTGTG
ATCCGTGCTCCCAAGAGTAAAGAAGGGTATGCTGCAATAGGAGGCGGTTCACCTTTGCGA
AAAATCACCGATGAGCAGGCACATGCAATTAAAGCGGCTTTGGAAGCAAAGAACATGCAT
GTAAATGTTTATGTTGGCATGCGTTACTGGTACCCATTCACTGAGGAAGCAATTGAGCAA
ATTAAGAAAGACAAGATTACAAGGCTTGTTGTGCTGCCACTTTATCCTCAATTCTCTATT
TCTACAACTGGGTCAAGCATCCGTGTTCTTGAAAGTATCTTCAGGGAAGATGCATATCTG
TCAAGGCTTCCTGTTTCTATTATACAATGCTGGTATCAACGACAAGGTTATATCAACTCT
ATGGCTGACTTGATTGAGGAAGAGCTGCAGATTTTCTCTAAGCCCAAGGAGGTGATGATA
TTCTTCAGTGCCCATGGAGTACCCGTTAGTTATGTTGAGGATGCTGGAGATCCATACAGA
GATCAGATGGAGGAGTGCATCTACTTAATCATGCAAGAGTTGAAAGCTAGAGGAATCAGC
AATAAGCATACTCTCGCTTACCAGAGTCGAGTTGGTCCTGTACAATGGCTGAAACCATAC
ACTGATGAAGTTCTTGTTGAGCTTGGCCAAAAGGGTGTAAAAAGTCTCCTTGCTGTTCCA
GTAAGCTTTGTAAGCGAACACATAGAAACACTTGAAGAGATTGACATGGAGTATAAGCAC
CTGGCTCTTGAATCTGGAATCGAGAACTGGGGCCGAGTCCCTGCTCTGGGTTGCACCTCT
TCTTTCATCACAGATCTGGCAGATGCTGTGATAGAAGCTCTACCTGCGGCAAAGGCCATG
ACAACACAGAGCACCTCTAAGGAATTCAACATGGATCCTGTGAACTATGCTATAAAAATG
TTCTTCGGATCAATCTTAGCATTTGTTTTGCTCTTGTCACCGAAAATGATATCAAAGTTC
AAAAACCAGCTCTTTTGA

Peptide Sequence

PEP ID

VIT_04s0008g00800.t01
PEP Infomation

pep chromosome:12X:4:690539:694710:1 gene:VIT_04s0008g00800 transcript:VIT_04s0008g00800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferrochelatase [Source:UniProtKB/TrEMBL;Acc:D7STM2]
Sequence

MEAVSTSSILPHGKVSGLNHRSFNQKSSMSCPQTRSFKSAHCYSSEGLKGSQLLNSIEKR
NPVGQTFSSAGAYTYVGSAVESPTHAVEEKVGVLLLNLGGPETLHDVQPFLFNLFADPDI
IRLPRLFQFLQRPLAQLISVIRAPKSKEGYAAIGGGSPLRKITDEQAHAIKAALEAKNMH
VNVYVGMRYWYPFTEEAIEQIKKDKITRLVVLPLYPQFSISTTGSSIRVLESIFREDAYL
SRLPVSIIQCWYQRQGYINSMADLIEEELQIFSKPKEVMIFFSAHGVPVSYVEDAGDPYR
DQMEECIYLIMQELKARGISNKHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAVP
VSFVSEHIETLEEIDMEYKHLALESGIENWGRVPALGCTSSFITDLADAVIEALPAAKAM
TTQSTSKEFNMDPVNYAIKMFFGSILAFVLLLSPKMISKFKNQLF

Transcript Sequence

Transcript ID

VIT_04s0008g00800.t01
Transcript Infomation

cdna chromosome:12X:4:690539:694710:1 gene:VIT_04s0008g00800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ferrochelatase [Source:UniProtKB/TrEMBL;Acc:D7STM2]
Sequence

ACTGCGACCAGCGTTTTTGACATTTTCAATTCAACACTCCACTCGAAAGCCCTAGAAATC
CCAATCTCATTTCCTCACAACCTATCTCTCACTTTTCCTCATTTCTCGAAGATTCGGGAT
TCGATTTTGGCCATGGAGGCAGTTTCAACCTCCAGTATTCTCCCCCATGGGAAAGTCTCC
GGTTTGAATCATCGGAGCTTTAATCAGAAATCGTCTATGTCATGCCCTCAGACCAGATCG
TTTAAGTCTGCACACTGTTATTCATCTGAGGGTCTCAAGGGATCACAGCTTTTGAACTCC
ATTGAGAAGAGAAATCCAGTTGGGCAAACATTTTCATCTGCAGGAGCATACACTTATGTT
GGAAGTGCTGTGGAATCCCCTACACATGCTGTGGAAGAAAAGGTTGGAGTGCTGCTTTTG
AATCTTGGAGGACCAGAGACACTTCATGATGTTCAACCATTTTTGTTCAATTTATTTGCT
GATCCAGATATTATTCGACTTCCAAGGCTGTTCCAGTTTCTCCAGCGACCATTGGCTCAA
CTAATTTCTGTGATCCGTGCTCCCAAGAGTAAAGAAGGGTATGCTGCAATAGGAGGCGGT
TCACCTTTGCGAAAAATCACCGATGAGCAGGCACATGCAATTAAAGCGGCTTTGGAAGCA
AAGAACATGCATGTAAATGTTTATGTTGGCATGCGTTACTGGTACCCATTCACTGAGGAA
GCAATTGAGCAAATTAAGAAAGACAAGATTACAAGGCTTGTTGTGCTGCCACTTTATCCT
CAATTCTCTATTTCTACAACTGGGTCAAGCATCCGTGTTCTTGAAAGTATCTTCAGGGAA
GATGCATATCTGTCAAGGCTTCCTGTTTCTATTATACAATGCTGGTATCAACGACAAGGT
TATATCAACTCTATGGCTGACTTGATTGAGGAAGAGCTGCAGATTTTCTCTAAGCCCAAG
GAGGTGATGATATTCTTCAGTGCCCATGGAGTACCCGTTAGTTATGTTGAGGATGCTGGA
GATCCATACAGAGATCAGATGGAGGAGTGCATCTACTTAATCATGCAAGAGTTGAAAGCT
AGAGGAATCAGCAATAAGCATACTCTCGCTTACCAGAGTCGAGTTGGTCCTGTACAATGG
CTGAAACCATACACTGATGAAGTTCTTGTTGAGCTTGGCCAAAAGGGTGTAAAAAGTCTC
CTTGCTGTTCCAGTAAGCTTTGTAAGCGAACACATAGAAACACTTGAAGAGATTGACATG
GAGTATAAGCACCTGGCTCTTGAATCTGGAATCGAGAACTGGGGCCGAGTCCCTGCTCTG
GGTTGCACCTCTTCTTTCATCACAGATCTGGCAGATGCTGTGATAGAAGCTCTACCTGCG
GCAAAGGCCATGACAACACAGAGCACCTCTAAGGAATTCAACATGGATCCTGTGAACTAT
GCTATAAAAATGTTCTTCGGATCAATCTTAGCATTTGTTTTGCTCTTGTCACCGAAAATG
ATATCAAAGTTCAAAAACCAGCTCTTTTGAAGGATATTAGGACACACTAAACCATTGCGG
ACTCCATCATACTCGACACAGGCAGCCCTTACAGAGAATGAAAGATGAAACATAAGAACA
CAGATTTTTTTTATTCAAGAATCTCAAATATTCTCTCTTTTTTTTTTGCTTATACCAAAG
A