Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_04s0008g00770.t01
CDS Infomation	cds chromosome:12X:4:676927:680927:1 gene:VIT_04s0008g00770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL;Acc:D7STM0]
Sequence	ATGCAGGCTTGTAGTGGAACTGCTGCTATGGGTTCTCTGCAACAGCCCATTTGGATTAAG GGGTCAAGTTTTGCTCCAAATGGGTCTACTGTCAATGGGTTCCCACACCAAATTAAACTG AACTCGGTTAAGCCATGTAGATCTTATATCAAAGGAAGCTTGGTTACTGGGAAGCCACCT TCCTCTGTGTCTGTCACTGTGCCTGGAAATGGGGATAGTGGAGTCAATTTTATTGACCAT GGCTTGAATGAAGCTGATCCTGAAGTGTGTGCAATTATTTACAAGGAAAAGCAACGGCAA ATGAAAAGCTTAGAACTTATTGCCTCAGAGAATTTCACATCCCGGGCAGTGATGGAAGCT GTTGGTTCTTGCCTCACAAACAAATATTCTGAGGGATTGCCTGGTAAAAGGTACTATGGT GGTAATGAGTTCATTGATGAGCTGGAAACTCTGTGTCAGAAGAGGGCTTTGGCAGCATTC CACTTAGATGGAAAGAAGTGGGGTGTCAATGTTCAACCATTGTCTGGTTCTCCAGCTAAC TTTGAAGTATACACTGCCCTTCTCAATCCACATGACAGAATCATGGGCTTGGACTTACCT CATGGGGGCCACTTGTCTCATGGTTTCATGACTCCTAAAAGACGGGTATCAGGCACATCA ATTTATTTTGAGTCTATGCCTTATCGACTTGATGAATCTACAGGTCTTGTTGATTATGAC ATGCTTGAGAAAACAGCTAATCTTTTTCGACCAAAACTCATTATTGCTGGTGCTAGTGCT TATCCTCGAGATTTTGATTATCCTCGTATGAGGAAGATTGCAGATGGTGTTGGTGCTTTT CTCATGATGGATATGGCTCACATTAGTGGACTTGTTGCTGCTTCTGTGGTTGCTGACCCC TTTGAGTACTGTGATATTGTGACAACAACAACACACAAGTCTCTTAGAGGTCCTAGAGGT GGCATGATCTTCTTCAAGAAAGATTCTGTTCTGGGAGTTGACTTAGAATCTGCCATCAAC AATGCTGTTTTTCCAGGTTTACAGGGTGGTCCGCATAACCACACAATCGGGGGACTTTCA GTCTGCTTAAAGCATGCCCAATCCCCAGAATTCAAGGCTTACCAGAACCAGGTAGTGTCA AACTGTAGAGCTCTTGCTGGCCGGTTAATCGAATTGGGATATAACCTGGTTTCCGGGGGA AGTGATAACCACCTTATTCTTGTGGATCTTAGGCCATTGGGTATTGATGGGGCTCGGGCG GAGAAGATTCTTGACATGGCTTCTATCACCCTCAACAAGAATTCAGTGCCTGGCGACAAG AGTGCCCTCGTGCCTGGTGGCATTCGCATCGGATCACCTGCGATGACTACCAGGGGATTC TCCGAGAAGGAATTCATAGCAACTGCAGATTTCATTCACGAGGGCGTGCAGCTATCTCTT GAAGCAAAAAAATCGGTTTCAGGATCAAAGCTCCTAGACTTCATGAAGTTTGTAACGTCC CCAGATTTCTCTTTGATAGACCGGGTGTCGGATTTGCAGAGGAGAGTCGAAACTCTCACA ACCCAGTTCCCAATGCCTGGATTATAA

Peptide Sequence

PEP ID	VIT_04s0008g00770.t01
PEP Infomation	pep chromosome:12X:4:676927:680927:1 gene:VIT_04s0008g00770 transcript:VIT_04s0008g00770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL;Acc:D7STM0]
Sequence	MQACSGTAAMGSLQQPIWIKGSSFAPNGSTVNGFPHQIKLNSVKPCRSYIKGSLVTGKPP SSVSVTVPGNGDSGVNFIDHGLNEADPEVCAIIYKEKQRQMKSLELIASENFTSRAVMEA VGSCLTNKYSEGLPGKRYYGGNEFIDELETLCQKRALAAFHLDGKKWGVNVQPLSGSPAN FEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYD MLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADGVGAFLMMDMAHISGLVAASVVADP FEYCDIVTTTTHKSLRGPRGGMIFFKKDSVLGVDLESAINNAVFPGLQGGPHNHTIGGLS VCLKHAQSPEFKAYQNQVVSNCRALAGRLIELGYNLVSGGSDNHLILVDLRPLGIDGARA EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFIATADFIHEGVQLSL EAKKSVSGSKLLDFMKFVTSPDFSLIDRVSDLQRRVETLTTQFPMPGL

Transcript Sequence

Transcript ID	VIT_04s0008g00770.t01
Transcript Infomation	cdna chromosome:12X:4:676927:680927:1 gene:VIT_04s0008g00770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL;Acc:D7STM0]
Sequence	AGAGGAATTCTGCAAGGCATCATATTAGAAGCCAGAATGCAGGCTTGTAGTGGAACTGCT GCTATGGGTTCTCTGCAACAGCCCATTTGGATTAAGGGGTCAAGTTTTGCTCCAAATGGG TCTACTGTCAATGGGTTCCCACACCAAATTAAACTGAACTCGGTTAAGCCATGTAGATCT TATATCAAAGGAAGCTTGGTTACTGGGAAGCCACCTTCCTCTGTGTCTGTCACTGTGCCT GGAAATGGGGATAGTGGAGTCAATTTTATTGACCATGGCTTGAATGAAGCTGATCCTGAA GTGTGTGCAATTATTTACAAGGAAAAGCAACGGCAAATGAAAAGCTTAGAACTTATTGCC TCAGAGAATTTCACATCCCGGGCAGTGATGGAAGCTGTTGGTTCTTGCCTCACAAACAAA TATTCTGAGGGATTGCCTGGTAAAAGGTACTATGGTGGTAATGAGTTCATTGATGAGCTG GAAACTCTGTGTCAGAAGAGGGCTTTGGCAGCATTCCACTTAGATGGAAAGAAGTGGGGT GTCAATGTTCAACCATTGTCTGGTTCTCCAGCTAACTTTGAAGTATACACTGCCCTTCTC AATCCACATGACAGAATCATGGGCTTGGACTTACCTCATGGGGGCCACTTGTCTCATGGT TTCATGACTCCTAAAAGACGGGTATCAGGCACATCAATTTATTTTGAGTCTATGCCTTAT CGACTTGATGAATCTACAGGTCTTGTTGATTATGACATGCTTGAGAAAACAGCTAATCTT TTTCGACCAAAACTCATTATTGCTGGTGCTAGTGCTTATCCTCGAGATTTTGATTATCCT CGTATGAGGAAGATTGCAGATGGTGTTGGTGCTTTTCTCATGATGGATATGGCTCACATT AGTGGACTTGTTGCTGCTTCTGTGGTTGCTGACCCCTTTGAGTACTGTGATATTGTGACA ACAACAACACACAAGTCTCTTAGAGGTCCTAGAGGTGGCATGATCTTCTTCAAGAAAGAT TCTGTTCTGGGAGTTGACTTAGAATCTGCCATCAACAATGCTGTTTTTCCAGGTTTACAG GGTGGTCCGCATAACCACACAATCGGGGGACTTTCAGTCTGCTTAAAGCATGCCCAATCC CCAGAATTCAAGGCTTACCAGAACCAGGTAGTGTCAAACTGTAGAGCTCTTGCTGGCCGG TTAATCGAATTGGGATATAACCTGGTTTCCGGGGGAAGTGATAACCACCTTATTCTTGTG GATCTTAGGCCATTGGGTATTGATGGGGCTCGGGCGGAGAAGATTCTTGACATGGCTTCT ATCACCCTCAACAAGAATTCAGTGCCTGGCGACAAGAGTGCCCTCGTGCCTGGTGGCATT CGCATCGGATCACCTGCGATGACTACCAGGGGATTCTCCGAGAAGGAATTCATAGCAACT GCAGATTTCATTCACGAGGGCGTGCAGCTATCTCTTGAAGCAAAAAAATCGGTTTCAGGA TCAAAGCTCCTAGACTTCATGAAGTTTGTAACGTCCCCAGATTTCTCTTTGATAGACCGG GTGTCGGATTTGCAGAGGAGAGTCGAAACTCTCACAACCCAGTTCCCAATGCCTGGATTA TAAACGGCACAAACTCACAAAGAAGTAGTGCTTAATATGAGAGGACCAAAGTTTCAAAGT TGATATTTGGCATAATGCGGAAGAATGCTGAGATTTTTGCATGCTTTGTATTATCATAAC TTAGTACTTTCACCGATATTGCTGATAAAGGAAGAGACGGTGGAAGCCAGCCATGTCTAT TAATTTCTTTTCCCCTTGTCATAAGCACTTGTATGGTGGCT