Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_03s0180g00170.t01
CDS Infomation

cds chromosome:12X:3:6101310:6105927:-1 gene:VIT_03s0180g00170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:D7UC00]
Sequence

ATGGGCGAATCTGATCATCCTTCTCGTATCTCCGTTCATCAAGCTCTTGGCGGTGGTTCA
GTTGCTGATTTCCTGTTGTGGAGACGGTGGTGTGGAGCGGCGGTTTGTCTAGTCTCTGCA
AGTAGCTTGTGGTTTCTCTTCGAACGAGCCGGCTATAACCTATTGTCTTTCGTAGCAAAT
GTGGTGTTGCTTTTGGTTGTGATCCTCTTCCTGTGGGCCAAATCTGCATCTATTCTTAAT
AGACCTCTGCCTCCTCTCCCTGATATGGAAATCTCTGAAGAATCTGTTGTGAAAGCTGCG
GATGTCATTCGAGTATGGATCAATTATGCGTTATCAGTTGCACGGGACATTGCAGTTGGT
AGAAATGTGAAACTCTTCCTCCAGGTTGCCTTTGGCTTGTGGGTTGTTTCATATATTGGC
AGTCTCTTCAACTTCCTGACTCTTGTCTATATTGGGGTTGTTCTTAGCCTTTCAGTTCCT
GTGTTATATGACAAGTATCAGGACCACATTGATGACAAGCTGAGGGTAACACATCGAGTT
GTTCAAACACAGTATAAGAAAATTGATGATAAAATCCTAAGAAAGATCCCAATGCCCATC
AACATGGGGAAGAAAACTCAGTAG

Peptide Sequence

PEP ID

VIT_03s0180g00170.t01
PEP Infomation

pep chromosome:12X:3:6101310:6105927:-1 gene:VIT_03s0180g00170 transcript:VIT_03s0180g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:D7UC00]
Sequence

MGESDHPSRISVHQALGGGSVADFLLWRRWCGAAVCLVSASSLWFLFERAGYNLLSFVAN
VVLLLVVILFLWAKSASILNRPLPPLPDMEISEESVVKAADVIRVWINYALSVARDIAVG
RNVKLFLQVAFGLWVVSYIGSLFNFLTLVYIGVVLSLSVPVLYDKYQDHIDDKLRVTHRV
VQTQYKKIDDKILRKIPMPINMGKKTQ

Transcript Sequence

Transcript ID

VIT_03s0180g00170.t01
Transcript Infomation

cdna chromosome:12X:3:6101310:6105927:-1 gene:VIT_03s0180g00170 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:D7UC00]
Sequence

GAAACCCTAATAATCGCCATGGGCGAATCTGATCATCCTTCTCGTATCTCCGTTCATCAA
GCTCTTGGCGGTGGTTCAGTTGCTGATTTCCTGTTGTGGAGACGGTGGTGTGGAGCGGCG
GTTTGTCTAGTCTCTGCAAGTAGCTTGTGGTTTCTCTTCGAACGAGCCGGCTATAACCTA
TTGTCTTTCGTAGCAAATGTGGTGTTGCTTTTGGTTGTGATCCTCTTCCTGTGGGCCAAA
TCTGCATCTATTCTTAATAGACCTCTGCCTCCTCTCCCTGATATGGAAATCTCTGAAGAA
TCTGTTGTGAAAGCTGCGGATGTCATTCGAGTATGGATCAATTATGCGTTATCAGTTGCA
CGGGACATTGCAGTTGGTAGAAATGTGAAACTCTTCCTCCAGGTTGCCTTTGGCTTGTGG
GTTGTTTCATATATTGGCAGTCTCTTCAACTTCCTGACTCTTGTCTATATTGGGGTTGTT
CTTAGCCTTTCAGTTCCTGTGTTATATGACAAGTATCAGGACCACATTGATGACAAGCTG
AGGGTAACACATCGAGTTGTTCAAACACAGTATAAGAAAATTGATGATAAAATCCTAAGA
AAGATCCCAATGCCCATCAACATGGGGAAGAAAACTCAGTAGACCAAGGGGGTCCCAAGT
GGCACAGAAAAATTTGAGTAGGGCTTAGAGACAGGGTTTTCAAAGTATGAAGTATCTTGA
GGTTCCTTTTTTTGCTGGAGGCTGTCAGTGTCTATTTCAACTACCGGTTAGTATGACAAA
CCATCAGGAGCAAGACTAGCCACCATCAACTTTGACCTTTTTGGGATTATCTTCAATTTT
TTCGTAGTCTTTATGAAACACCTACTGTTGATCAACTTTGGTCTGGGACATTGACCCATG
TTATGCTTTACACAAACTTTTCACTGGATGAAGAAATTCTCCTCAAGTAGCAACTTGGTA
ATTGGAAAACGAAGTTTGATTCCCTGACGTGCTGCTGGAGTTGTCTAAAATCTATTTGCT
TTTATCAGTTGGAAAGGATTTTTATGTTTTAATTGGTTTGAAGATTTATGCTTTTATGTT
CGTACAACAAGATGGCTGGT