Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_03s0180g00130.t01
CDS Infomation	cds chromosome:12X:3:6060227:6064528:-1 gene:VIT_03s0180g00130 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6I5Y5]
Sequence	ATGAAGACAATCCAAACAACCCCCAAACCCTTCATCGACTTTCCCGCGCCCAATCACGGG CGAGACCATCGCAAAACCACTATAAAATGCATCATAGGCTCCTGTCTCACTTCCACTATC AGCTCAACCGTCCCTACGGCGCAGCTTAGCACGATCCACCTCCGGCATACAGCTATGGCC GCTGCGTCTTCATCGACTCTCTTTCCATCAAACAAGCTCTCTTCTAATTCTCTGTCACGG AAGCTATCGTTGGCCCCCGCCTTCTCTGTCGCCGTCGTGGTGCCCCGACGGCGTCGGTCG TTAGTGGTGGTGGCGACGGCCTTGGATGCGAAACCGACGGTTTTGGTTGCGGAAAAGCTG GGAGCGGCGGGGCTCGATCTGCTGAAAGATTTTGCTAACGTTGATTGCGCGTATAATCTG AGCCCGGAGGAGCTGTGCACCAAGATCTCGCTCTGCGACGCCTTGATCGTCCGTAGTGGA ACCAAGGTGAGTCGAGAGGTGTTCGAGGCATCAAGCGGCCGTTTGAAGGTAGTCGGACGG GCTGGCGTAGGTATCGATAACGTGGATCTGGCCGCGGCGACAGAGCATGGGTGCCTTGTG GTGAATGCGCCCACGGCGAATACGGTTGCGGCGGCGGAGCATGGGATCGCTCTCCTAACG GCGATGGCGAGGAATGTTGCGCAGGCTGATGCGTCTGTGAAATCTGGGAAGTGGCAAAGG AACAAATATGTGGGTGTTTCTCTTGTTGGGAAAACGCTTGCTGTGATGGGGTTTGGTAAG GTTGGGTCAGAAGTTACCCGACGTGCCAAGGGGCTTGGTATGCATGTGATTGCACATGAT CCATATGCAGCTGCAGACCGTGCCCGTGCAATAGGTGTGGAACTTGTGGGCTTTGATGAA GCCATATCAACTGCAGATTTCATATCACTTCATATGCCCCTTACTCCTGCTACGTCGAAG ATGCTCAATGATGAAACTTTTGCCAAAATGAAGAAAGGAGTTCGGATAATTAATGTTGCT CGTGGGGGGGTAATTGATGAAGAAGCTCTTGTGAGGGCACTGGATGCTGGAATTGTTGCA CAGGCTGCTCTTGATGTTTTCACAGAAGAGCCACCCCCAAAAGACAGCAAATTAATACTA CATGAAAATGTAACTGTGACTCCTCATCTTGGTGCCAGCACTATGGAAGCTCAGGAAGGA GTAGCCATTGAGATAGCTGAAGCTGTTGTTGGAGCCTTAAAGGGGGAGCTTGCTGCTACT GCAGTCAATGCACCAATGGTTCCTGCAGAGGTTCTGTCAGAGCTGAAACCATTTGTTGAA CTTGCTGAGAAACTTGGGAGGCTGGCTGTCCAGTTAGTATCCGGTGGAAGTGGTGTAAAG TCAGTGAAAGTGACATATGCTTCTGCCAGGGCTCCTGATGACCTTGACACAAGGCTACTC CGAGCCATGATCACTAAGGGTCTGATTGAGCCCATATCCAGTGTTTTTGTGAACTTGGTG AATGCTGATTTCTCTGCTAAACAGAGAGGACTCCGAATAACAGAAGAACGATCAATTCTA GATGGTTCACCTGAGAGTCCACTTGAGTTCATCCAGGTTCAGATTGCTAATGTGGAATCA AAATTTGCCAGTGCCATTTCTGAGTCTGGGGAGATTACAGTGGAGGGACGTGTCAAAGAT GGGATTCCCCATTTGACAAAGGTAGGGTCTTTTGAAGTGGATGTGAGTTTGGAAGGTAGC ATTATACTTTGCAGACAGGTAGATCAGCCGGGTATGATTGGAAAGGTTGGGAGCATTTTG GGGGAGGAGAACGTGAATGTGAGCTTCATGAGCGTTGGAAGAGTTGCGCCTCGGAAGCAT GCTGTAATGGCTATTGGAGTGGATGAGCAACCTAGCAAGGTAACGTTGAAGAAGATTGGG GAGATTCCAGCAGTAGAAGAGTTTGTTTTCCTCAAGTTGTAA

Peptide Sequence

PEP ID	VIT_03s0180g00130.t01
PEP Infomation	pep chromosome:12X:3:6060227:6064528:-1 gene:VIT_03s0180g00130 transcript:VIT_03s0180g00130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6I5Y5]
Sequence	MKTIQTTPKPFIDFPAPNHGRDHRKTTIKCIIGSCLTSTISSTVPTAQLSTIHLRHTAMA AASSSTLFPSNKLSSNSLSRKLSLAPAFSVAVVVPRRRRSLVVVATALDAKPTVLVAEKL GAAGLDLLKDFANVDCAYNLSPEELCTKISLCDALIVRSGTKVSREVFEASSGRLKVVGR AGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMARNVAQADASVKSGKWQR NKYVGVSLVGKTLAVMGFGKVGSEVTRRAKGLGMHVIAHDPYAAADRARAIGVELVGFDE AISTADFISLHMPLTPATSKMLNDETFAKMKKGVRIINVARGGVIDEEALVRALDAGIVA QAALDVFTEEPPPKDSKLILHENVTVTPHLGASTMEAQEGVAIEIAEAVVGALKGELAAT AVNAPMVPAEVLSELKPFVELAEKLGRLAVQLVSGGSGVKSVKVTYASARAPDDLDTRLL RAMITKGLIEPISSVFVNLVNADFSAKQRGLRITEERSILDGSPESPLEFIQVQIANVES KFASAISESGEITVEGRVKDGIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSIL GEENVNVSFMSVGRVAPRKHAVMAIGVDEQPSKVTLKKIGEIPAVEEFVFLKL

Transcript Sequence

Transcript ID	VIT_03s0180g00130.t01
Transcript Infomation	cdna chromosome:12X:3:6060227:6064528:-1 gene:VIT_03s0180g00130 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6I5Y5]
Sequence	ATGAAGACAATCCAAACAACCCCCAAACCCTTCATCGACTTTCCCGCGCCCAATCACGGG CGAGACCATCGCAAAACCACTATAAAATGCATCATAGGCTCCTGTCTCACTTCCACTATC AGCTCAACCGTCCCTACGGCGCAGCTTAGCACGATCCACCTCCGGCATACAGCTATGGCC GCTGCGTCTTCATCGACTCTCTTTCCATCAAACAAGCTCTCTTCTAATTCTCTGTCACGG AAGCTATCGTTGGCCCCCGCCTTCTCTGTCGCCGTCGTGGTGCCCCGACGGCGTCGGTCG TTAGTGGTGGTGGCGACGGCCTTGGATGCGAAACCGACGGTTTTGGTTGCGGAAAAGCTG GGAGCGGCGGGGCTCGATCTGCTGAAAGATTTTGCTAACGTTGATTGCGCGTATAATCTG AGCCCGGAGGAGCTGTGCACCAAGATCTCGCTCTGCGACGCCTTGATCGTCCGTAGTGGA ACCAAGGTGAGTCGAGAGGTGTTCGAGGCATCAAGCGGCCGTTTGAAGGTAGTCGGACGG GCTGGCGTAGGTATCGATAACGTGGATCTGGCCGCGGCGACAGAGCATGGGTGCCTTGTG GTGAATGCGCCCACGGCGAATACGGTTGCGGCGGCGGAGCATGGGATCGCTCTCCTAACG GCGATGGCGAGGAATGTTGCGCAGGCTGATGCGTCTGTGAAATCTGGGAAGTGGCAAAGG AACAAATATGTGGGTGTTTCTCTTGTTGGGAAAACGCTTGCTGTGATGGGGTTTGGTAAG GTTGGGTCAGAAGTTACCCGACGTGCCAAGGGGCTTGGTATGCATGTGATTGCACATGAT CCATATGCAGCTGCAGACCGTGCCCGTGCAATAGGTGTGGAACTTGTGGGCTTTGATGAA GCCATATCAACTGCAGATTTCATATCACTTCATATGCCCCTTACTCCTGCTACGTCGAAG ATGCTCAATGATGAAACTTTTGCCAAAATGAAGAAAGGAGTTCGGATAATTAATGTTGCT CGTGGGGGGGTAATTGATGAAGAAGCTCTTGTGAGGGCACTGGATGCTGGAATTGTTGCA CAGGCTGCTCTTGATGTTTTCACAGAAGAGCCACCCCCAAAAGACAGCAAATTAATACTA CATGAAAATGTAACTGTGACTCCTCATCTTGGTGCCAGCACTATGGAAGCTCAGGAAGGA GTAGCCATTGAGATAGCTGAAGCTGTTGTTGGAGCCTTAAAGGGGGAGCTTGCTGCTACT GCAGTCAATGCACCAATGGTTCCTGCAGAGGTTCTGTCAGAGCTGAAACCATTTGTTGAA CTTGCTGAGAAACTTGGGAGGCTGGCTGTCCAGTTAGTATCCGGTGGAAGTGGTGTAAAG TCAGTGAAAGTGACATATGCTTCTGCCAGGGCTCCTGATGACCTTGACACAAGGCTACTC CGAGCCATGATCACTAAGGGTCTGATTGAGCCCATATCCAGTGTTTTTGTGAACTTGGTG AATGCTGATTTCTCTGCTAAACAGAGAGGACTCCGAATAACAGAAGAACGATCAATTCTA GATGGTTCACCTGAGAGTCCACTTGAGTTCATCCAGGTTCAGATTGCTAATGTGGAATCA AAATTTGCCAGTGCCATTTCTGAGTCTGGGGAGATTACAGTGGAGGGACGTGTCAAAGAT GGGATTCCCCATTTGACAAAGGTAGGGTCTTTTGAAGTGGATGTGAGTTTGGAAGGTAGC ATTATACTTTGCAGACAGGTAGATCAGCCGGGTATGATTGGAAAGGTTGGGAGCATTTTG GGGGAGGAGAACGTGAATGTGAGCTTCATGAGCGTTGGAAGAGTTGCGCCTCGGAAGCAT GCTGTAATGGCTATTGGAGTGGATGAGCAACCTAGCAAGGTAACGTTGAAGAAGATTGGG GAGATTCCAGCAGTAGAAGAGTTTGTTTTCCTCAAGTTGTAATGTGAAATCTTCGTATCT GTGTGCTTGGATCCCAATTTTGA